BLASTX nr result

ID: Bupleurum21_contig00005262 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005262
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation...   368   1e-99
ref|XP_002326844.1| predicted protein [Populus trichocarpa] gi|2...   347   1e-93
gb|ABK95855.1| unknown [Populus trichocarpa]                          345   6e-93
ref|XP_002302506.1| predicted protein [Populus trichocarpa] gi|2...   335   1e-89
gb|ADO64263.1| eukaryotic translation initiation factor 4G [Cari...   323   3e-86

>ref|XP_002269466.2| PREDICTED: eukaryotic translation initiation factor 4G-like [Vitis
            vinifera]
          Length = 1935

 Score =  368 bits (944), Expect = 1e-99
 Identities = 189/290 (65%), Positives = 217/290 (74%), Gaps = 10/290 (3%)
 Frame = +1

Query: 1    MIDHPKAKEHMDAYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 180
            MIDHPKAKEHMD YFD MAKLSNNMKLSSRVRFMLKD+IDLRKNKWQQRRKVEGPKKIEE
Sbjct: 1461 MIDHPKAKEHMDVYFDRMAKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEE 1520

Query: 181  VHRDAANERQAQTNRLARGPSMGSSFRRAQQPMDFAPRGSNVLLSPNTHMGGFRGVQPP- 357
            VHRDAA ERQAQ +RL+RGPSM SS RR   PMDF PRGS +L SPN+ MGGFRG+  P 
Sbjct: 1521 VHRDAAQERQAQASRLSRGPSMNSSTRRGAPPMDFGPRGSTMLSSPNSQMGGFRGLPSPQ 1580

Query: 358  -RGYANQDIRTDERHHFDNRNMSVPLPQRPLGNDSITLVPQGGLARGMSIRGQPLMSHIP 534
             RG+  QD+R ++R  +++R  SVPLP R +G+DSITL PQGGLARGMSIRG P MS  P
Sbjct: 1581 VRGFGAQDVRLEDRQSYESRTPSVPLPHRSIGDDSITLGPQGGLARGMSIRGPPAMSSGP 1640

Query: 535  FSDMH--NPDSRRTTTG-NGYGSVSDRPPYTSREEIIPRFAPDRFVGPGAHDHMNLMDGN 705
              D+   + DSRR T G NGY SV DR  Y+SREEI+PR+ P+RF GP A+D  +  D N
Sbjct: 1641 LGDISPGSGDSRRLTAGLNGYSSVPDRTTYSSREEIMPRYIPERFGGPSAYDQSSTQDRN 1700

Query: 706  STYGNREVRNQDHSFSRSRPNTPPARR-----KENISSEKVWPEEQLRKM 840
              Y NR+VR  D  F RS   +PPAR       +N+  EKVWPEE+LR M
Sbjct: 1701 LQYVNRDVRTPDRGFDRSLATSPPARAHGPAVSQNVPPEKVWPEERLRDM 1750


>ref|XP_002326844.1| predicted protein [Populus trichocarpa] gi|222835159|gb|EEE73594.1|
            predicted protein [Populus trichocarpa]
          Length = 1166

 Score =  347 bits (891), Expect = 1e-93
 Identities = 182/289 (62%), Positives = 214/289 (74%), Gaps = 9/289 (3%)
 Frame = +1

Query: 1    MIDHPKAKEHMDAYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 180
            MIDHPKAK HMDAYFDMMAKLSNNMKLSSRVRFMLKD+IDLRKNKWQQRRKVEGPKKIEE
Sbjct: 696  MIDHPKAKVHMDAYFDMMAKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEE 755

Query: 181  VHRDAANERQAQTNRLARGPSMGSSFRRAQQPMDFAPRGSNVLLSPNTHMGGFRGV-QPP 357
            VHRDAA ERQ QT+RLAR P M SS RR   PMDF PRGS +L SPN HMGGFRG     
Sbjct: 756  VHRDAAQERQLQTSRLARNPGMNSSPRRG--PMDFGPRGSTMLSSPNAHMGGFRGFPSQV 813

Query: 358  RGYANQDIRTDERHHFDNRNMSVPLPQRPLGNDSITLVPQGGLARGMSIRGQPLMSHIPF 537
            RG+ NQD+R ++R  ++ R +SVPLPQRPLG+DSITL PQGGLARGMSIRG P ++  P 
Sbjct: 814  RGHGNQDVRHEDRQSYEARTVSVPLPQRPLGDDSITLGPQGGLARGMSIRGTPAITVAPV 873

Query: 538  SDM--HNPDSRRTTTG-NGYGSVSDRPPYTSREEIIPRFAPDRFVGPGAHDHMNLMDGNS 708
            S++     DSRR   G NG  ++ +R  Y+ RE++IPR++PDRF  P  HD M+  + N 
Sbjct: 874  SEISPSPSDSRRMAAGLNGVSAILERSNYSPREDLIPRYSPDRFAVPPTHDQMSGQERNM 933

Query: 709  TYGNREVRNQDHSFSR-----SRPNTPPARRKENISSEKVWPEEQLRKM 840
             Y NR++RN DH F R     S  NT      ++I + K+WPEEQLR+M
Sbjct: 934  NYVNRDLRNLDHGFDRPLGSSSLTNTQGPSFAQSIPTGKMWPEEQLREM 982


>gb|ABK95855.1| unknown [Populus trichocarpa]
          Length = 670

 Score =  345 bits (886), Expect = 6e-93
 Identities = 181/289 (62%), Positives = 213/289 (73%), Gaps = 9/289 (3%)
 Frame = +1

Query: 1    MIDHPKAKEHMDAYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 180
            MIDHPKAK HMDAYFDMMAKLSNNMKLSSRVRFMLKD+IDLRKNKWQQRRKVEGPKKIEE
Sbjct: 200  MIDHPKAKVHMDAYFDMMAKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEE 259

Query: 181  VHRDAANERQAQTNRLARGPSMGSSFRRAQQPMDFAPRGSNVLLSPNTHMGGFRGV-QPP 357
            VHRDAA ERQ QT+RLAR P M SS RR   PMDF PRGS +L SPN HMGGFRG     
Sbjct: 260  VHRDAAQERQLQTSRLARNPGMNSSPRRG--PMDFGPRGSTMLSSPNAHMGGFRGFPSQV 317

Query: 358  RGYANQDIRTDERHHFDNRNMSVPLPQRPLGNDSITLVPQGGLARGMSIRGQPLMSHIPF 537
            RG+ N D+R ++R  ++ R +SVPLPQRPLG+DSITL PQGGLARGMSIRG P ++  P 
Sbjct: 318  RGHGNHDVRHEDRQSYEARTVSVPLPQRPLGDDSITLGPQGGLARGMSIRGTPAITVAPV 377

Query: 538  SDM--HNPDSRRTTTG-NGYGSVSDRPPYTSREEIIPRFAPDRFVGPGAHDHMNLMDGNS 708
            S++     DSRR   G NG  ++ +R  Y+ RE++IPR++PDRF  P  HD M+  + N 
Sbjct: 378  SEISPSPSDSRRMAAGLNGVSAILERSNYSPREDLIPRYSPDRFAVPPTHDQMSGQERNM 437

Query: 709  TYGNREVRNQDHSFSR-----SRPNTPPARRKENISSEKVWPEEQLRKM 840
             Y NR++RN DH F R     S  NT      ++I + K+WPEEQLR+M
Sbjct: 438  NYVNRDLRNLDHGFDRPLGSSSLTNTQGPSFAQSIPTGKMWPEEQLREM 486


>ref|XP_002302506.1| predicted protein [Populus trichocarpa] gi|222844232|gb|EEE81779.1|
            predicted protein [Populus trichocarpa]
          Length = 797

 Score =  335 bits (858), Expect = 1e-89
 Identities = 179/289 (61%), Positives = 206/289 (71%), Gaps = 9/289 (3%)
 Frame = +1

Query: 1    MIDHPKAKEHMDAYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 180
            MIDHPKAKEHMD YFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE
Sbjct: 483  MIDHPKAKEHMDVYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 542

Query: 181  VHRDAANERQAQTNRLARGPSMGSSFRRAQQPMDFAPRGSNVLLSPNTHMGGFRGVQPP- 357
            VHRDAA ERQ QT+RLAR P +  S RR   PMDF PRGS +L S N  MGGFRG     
Sbjct: 543  VHRDAAQERQLQTSRLARNPGINPSPRRG--PMDFGPRGSTMLPSLNAQMGGFRGFPTQV 600

Query: 358  RGYANQDIRTDERHHFDNRNMSVPLPQRPLGNDSITLVPQGGLARGMSIRGQPLMSHIPF 537
            RG+  QD+R +E+  ++ R MSVPLPQRPLG+DSITL PQGGLARGMSIRGQP       
Sbjct: 601  RGHGTQDVRFEEKQSYEARTMSVPLPQRPLGDDSITLGPQGGLARGMSIRGQPASMGTLV 660

Query: 538  SDMHNP--DSRRTTTG-NGYGSVSDRPPYTSREEIIPRFAPDRFVGPGAHDHMNLMDGNS 708
            +D+     D RR   G NG  ++S R  Y+ RE+IIPR+ PDRF  P A D MN  + N 
Sbjct: 661  ADISPSPGDPRRMAAGLNGSSAISGRSNYSPREDIIPRYTPDRFAVPPACDQMNGQERNM 720

Query: 709  TYGNREVRNQDHSFSRSRPNTPPARRK-----ENISSEKVWPEEQLRKM 840
             Y NR++RN DH F R   ++PP R +     +   + K+WPEE+LR M
Sbjct: 721  NYVNRDLRNLDHGFDRPLGSSPPTRAQGPPFSQTTPTGKLWPEERLRDM 769


>gb|ADO64263.1| eukaryotic translation initiation factor 4G [Carica papaya]
          Length = 1899

 Score =  323 bits (828), Expect = 3e-86
 Identities = 175/289 (60%), Positives = 207/289 (71%), Gaps = 9/289 (3%)
 Frame = +1

Query: 1    MIDHPKAKEHMDAYFDMMAKLSNNMKLSSRVRFMLKDSIDLRKNKWQQRRKVEGPKKIEE 180
            +IDHP AKEHMDAYFD M KLSNNMKLSSRVRFMLKD+IDLRKNKWQQRRKVEGPKKIEE
Sbjct: 1430 IIDHPLAKEHMDAYFDRMTKLSNNMKLSSRVRFMLKDAIDLRKNKWQQRRKVEGPKKIEE 1489

Query: 181  VHRDAANERQAQTNRLARGPSMGSSFRRAQQPMDFAPRGSNVLLSPNTHMGGFRGVQP-P 357
            VHRDAA ERQ Q +RL RGP +  S RRA  PM+F+PRGS +L S N+ +G FRG+ P  
Sbjct: 1490 VHRDAAQERQTQASRLTRGPGINPSARRA--PMEFSPRGSTMLPSQNSQVGSFRGLPPHA 1547

Query: 358  RGYANQDIRTDERHHFDNRNMSVPLPQRPLGNDSITLVPQGGLARGM-SIRGQPLMSHIP 534
            RGY  QD R DER  F+ R +SVPLPQRPLG+DSITL PQGGL RGM SIRG   M    
Sbjct: 1548 RGYGTQDARFDER-PFEARTLSVPLPQRPLGDDSITLGPQGGLGRGMSSIRGPLPMPGTR 1606

Query: 535  FSDMHNP--DSRRTTTG-NGYGSVSDRPPYTSREEIIPRFAPDRFVGPGAHDHMNLMDGN 705
             +D+ +   DSRR   G NG+G V +R  + SRE++  RF PDRF GP A++  +  +  
Sbjct: 1607 LADISSSPGDSRRMAAGLNGFGPVPERTTFASREDLTSRFVPDRFSGPAAYEQPSAQERG 1666

Query: 706  STYGNREVRNQDHSFSRSRPNTPPARRK----ENISSEKVWPEEQLRKM 840
              YGNRE RN D  F R +  +P +R +    +N+ SEKVWPEE+LR M
Sbjct: 1667 MNYGNREKRNPDRVFDRPQVTSPHSRGQGLSVQNVPSEKVWPEERLRDM 1715


Top