BLASTX nr result

ID: Bupleurum21_contig00005246 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005246
         (423 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255...    60   5e-14
emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera]    58   2e-13
ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|2...    53   2e-11
ref|XP_004150585.1| PREDICTED: uncharacterized protein LOC101222...    60   2e-07
gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK4857...    59   3e-07

>ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255957 [Vitis vinifera]
           gi|297738961|emb|CBI28206.3| unnamed protein product
           [Vitis vinifera]
          Length = 131

 Score = 59.7 bits (143), Expect(2) = 5e-14
 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 6/62 (9%)
 Frame = +3

Query: 255 KRKRIERKRRVHFAEDVVDPTGNNEAFRKK------LVVRNYKPSKVTQMPANRTALYAG 416
           K K+ ++K+RVHFAEDVVDP+G++E FR++        VR     KV  MPANR ALY G
Sbjct: 59  KEKKKKKKKRVHFAEDVVDPSGDSEEFRRQHSRNSSFSVRK-SSDKVKGMPANRVALYKG 117

Query: 417 IL 422
           IL
Sbjct: 118 IL 119



 Score = 42.7 bits (99), Expect(2) = 5e-14
 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +2

Query: 137 GVVFATAMAVSGTVIVLALRLQKLTSINAPP--LPRSCISDE 256
           GVV ATAMAVSGTVI+LAL   K  +   PP  LPRSCIS +
Sbjct: 9   GVVLATAMAVSGTVILLALCRPKAFT---PPQQLPRSCISSD 47


>emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera]
          Length = 132

 Score = 57.8 bits (138), Expect(2) = 2e-13
 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 6/64 (9%)
 Frame = +3

Query: 249 QMKRKRIERKRRVHFAEDVVDPTGNNEAFRKK------LVVRNYKPSKVTQMPANRTALY 410
           + ++++ ++K+RVHFAEDVVDP+G++E FR++        VR     KV  MPANR ALY
Sbjct: 58  EKEKEKKKKKKRVHFAEDVVDPSGDSEEFRRQHSRNSSFSVRK-SSDKVKGMPANRVALY 116

Query: 411 AGIL 422
            GIL
Sbjct: 117 KGIL 120



 Score = 42.7 bits (99), Expect(2) = 2e-13
 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 2/42 (4%)
 Frame = +2

Query: 137 GVVFATAMAVSGTVIVLALRLQKLTSINAPP--LPRSCISDE 256
           GVV ATAMAVSGTVI+LAL   K  +   PP  LPRSCIS +
Sbjct: 9   GVVLATAMAVSGTVILLALCRPKAFT---PPQQLPRSCISSD 47


>ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|222866658|gb|EEF03789.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 52.8 bits (125), Expect(2) = 2e-11
 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 15/84 (17%)
 Frame = +3

Query: 216 STRPLSQDLVSQMKRKRIERKRRVHFAEDVVDPTGNNEAFRKK----LVVRNYKPSKVT- 380
           S++   +  +S   +K+  +K+RVHFAEDVVDP G+ E FR++     + +N   S  T 
Sbjct: 49  SSQQALRSCISPEGKKKKGKKKRVHFAEDVVDPRGDGEEFRRQHEAVFLSQNSCSSSSTS 108

Query: 381 ----------QMPANRTALYAGIL 422
                     +MPANR ALY GIL
Sbjct: 109 TEFKKNGQQRRMPANRAALYNGIL 132



 Score = 40.8 bits (94), Expect(2) = 2e-11
 Identities = 21/23 (91%), Positives = 21/23 (91%)
 Frame = +2

Query: 137 GVVFATAMAVSGTVIVLALRLQK 205
           GVV ATAMAVSGTVIVLA RLQK
Sbjct: 9   GVVLATAMAVSGTVIVLAFRLQK 31


>ref|XP_004150585.1| PREDICTED: uncharacterized protein LOC101222988 [Cucumis sativus]
          Length = 136

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 13/85 (15%)
 Frame = +3

Query: 207 SHPSTRPLSQDLVSQMKRKRIERKRRVHFAEDVVDPTGNNEAFRKKLVV---RNYKPSKV 377
           S P+ R       S+ K+K+  +K+RVHFA+DVVDP GN E FR++  +    NY  S  
Sbjct: 40  SSPTLRSCFPSESSKKKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSP 99

Query: 378 TQ----------MPANRTALYAGIL 422
            Q          MPANR ALY GI+
Sbjct: 100 AQNPPTAAADPRMPANRVALYNGIM 124


>gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK48576.1| unknown
           [Lotus japonicus]
          Length = 139

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 13/88 (14%)
 Frame = +3

Query: 198 FKNSHPSTRPLSQDLVSQ--MKRKRIERKRRVHFAEDVVDPTGNNEAFRKKLVVRNYKPS 371
           F    PS  P+ +  +S    KR++ ++K+RVHFAEDV+D  G+   FR++++++    S
Sbjct: 40  FHEIAPSPPPILRSCISSDLKKREQKKKKKRVHFAEDVMDSCGDGAEFRRRMILKINSQS 99

Query: 372 KVTQ-----------MPANRTALYAGIL 422
           KV +           MPANR ALY GIL
Sbjct: 100 KVQKNCNGGTEKNRVMPANRAALYNGIL 127


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