BLASTX nr result
ID: Bupleurum21_contig00005246
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00005246 (423 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255... 60 5e-14 emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera] 58 2e-13 ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|2... 53 2e-11 ref|XP_004150585.1| PREDICTED: uncharacterized protein LOC101222... 60 2e-07 gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK4857... 59 3e-07 >ref|XP_002285231.1| PREDICTED: uncharacterized protein LOC100255957 [Vitis vinifera] gi|297738961|emb|CBI28206.3| unnamed protein product [Vitis vinifera] Length = 131 Score = 59.7 bits (143), Expect(2) = 5e-14 Identities = 33/62 (53%), Positives = 42/62 (67%), Gaps = 6/62 (9%) Frame = +3 Query: 255 KRKRIERKRRVHFAEDVVDPTGNNEAFRKK------LVVRNYKPSKVTQMPANRTALYAG 416 K K+ ++K+RVHFAEDVVDP+G++E FR++ VR KV MPANR ALY G Sbjct: 59 KEKKKKKKKRVHFAEDVVDPSGDSEEFRRQHSRNSSFSVRK-SSDKVKGMPANRVALYKG 117 Query: 417 IL 422 IL Sbjct: 118 IL 119 Score = 42.7 bits (99), Expect(2) = 5e-14 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 2/42 (4%) Frame = +2 Query: 137 GVVFATAMAVSGTVIVLALRLQKLTSINAPP--LPRSCISDE 256 GVV ATAMAVSGTVI+LAL K + PP LPRSCIS + Sbjct: 9 GVVLATAMAVSGTVILLALCRPKAFT---PPQQLPRSCISSD 47 >emb|CAN77909.1| hypothetical protein VITISV_000907 [Vitis vinifera] Length = 132 Score = 57.8 bits (138), Expect(2) = 2e-13 Identities = 31/64 (48%), Positives = 44/64 (68%), Gaps = 6/64 (9%) Frame = +3 Query: 249 QMKRKRIERKRRVHFAEDVVDPTGNNEAFRKK------LVVRNYKPSKVTQMPANRTALY 410 + ++++ ++K+RVHFAEDVVDP+G++E FR++ VR KV MPANR ALY Sbjct: 58 EKEKEKKKKKKRVHFAEDVVDPSGDSEEFRRQHSRNSSFSVRK-SSDKVKGMPANRVALY 116 Query: 411 AGIL 422 GIL Sbjct: 117 KGIL 120 Score = 42.7 bits (99), Expect(2) = 2e-13 Identities = 27/42 (64%), Positives = 30/42 (71%), Gaps = 2/42 (4%) Frame = +2 Query: 137 GVVFATAMAVSGTVIVLALRLQKLTSINAPP--LPRSCISDE 256 GVV ATAMAVSGTVI+LAL K + PP LPRSCIS + Sbjct: 9 GVVLATAMAVSGTVILLALCRPKAFT---PPQQLPRSCISSD 47 >ref|XP_002325224.1| predicted protein [Populus trichocarpa] gi|222866658|gb|EEF03789.1| predicted protein [Populus trichocarpa] Length = 144 Score = 52.8 bits (125), Expect(2) = 2e-11 Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 15/84 (17%) Frame = +3 Query: 216 STRPLSQDLVSQMKRKRIERKRRVHFAEDVVDPTGNNEAFRKK----LVVRNYKPSKVT- 380 S++ + +S +K+ +K+RVHFAEDVVDP G+ E FR++ + +N S T Sbjct: 49 SSQQALRSCISPEGKKKKGKKKRVHFAEDVVDPRGDGEEFRRQHEAVFLSQNSCSSSSTS 108 Query: 381 ----------QMPANRTALYAGIL 422 +MPANR ALY GIL Sbjct: 109 TEFKKNGQQRRMPANRAALYNGIL 132 Score = 40.8 bits (94), Expect(2) = 2e-11 Identities = 21/23 (91%), Positives = 21/23 (91%) Frame = +2 Query: 137 GVVFATAMAVSGTVIVLALRLQK 205 GVV ATAMAVSGTVIVLA RLQK Sbjct: 9 GVVLATAMAVSGTVIVLAFRLQK 31 >ref|XP_004150585.1| PREDICTED: uncharacterized protein LOC101222988 [Cucumis sativus] Length = 136 Score = 60.1 bits (144), Expect = 2e-07 Identities = 36/85 (42%), Positives = 47/85 (55%), Gaps = 13/85 (15%) Frame = +3 Query: 207 SHPSTRPLSQDLVSQMKRKRIERKRRVHFAEDVVDPTGNNEAFRKKLVV---RNYKPSKV 377 S P+ R S+ K+K+ +K+RVHFA+DVVDP GN E FR++ + NY S Sbjct: 40 SSPTLRSCFPSESSKKKKKQNNQKKRVHFAKDVVDPIGNGEDFRRQHEIAYSNNYSSSSP 99 Query: 378 TQ----------MPANRTALYAGIL 422 Q MPANR ALY GI+ Sbjct: 100 AQNPPTAAADPRMPANRVALYNGIM 124 >gb|AFK41316.1| unknown [Lotus japonicus] gi|388521029|gb|AFK48576.1| unknown [Lotus japonicus] Length = 139 Score = 59.3 bits (142), Expect = 3e-07 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 13/88 (14%) Frame = +3 Query: 198 FKNSHPSTRPLSQDLVSQ--MKRKRIERKRRVHFAEDVVDPTGNNEAFRKKLVVRNYKPS 371 F PS P+ + +S KR++ ++K+RVHFAEDV+D G+ FR++++++ S Sbjct: 40 FHEIAPSPPPILRSCISSDLKKREQKKKKKRVHFAEDVMDSCGDGAEFRRRMILKINSQS 99 Query: 372 KVTQ-----------MPANRTALYAGIL 422 KV + MPANR ALY GIL Sbjct: 100 KVQKNCNGGTEKNRVMPANRAALYNGIL 127