BLASTX nr result

ID: Bupleurum21_contig00005227 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005227
         (1364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|2...   230   2e-60
ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]...   190   3e-60
gb|AAB32591.2| MybSt1 [Solanum tuberosum]                             203   6e-60
gb|ABD65013.1| myb family transcription factor [Brassica oleracea]    148   1e-59
ref|XP_002865122.1| myb family transcription factor [Arabidopsis...   150   3e-59

>ref|XP_002304291.1| predicted protein [Populus trichocarpa] gi|222841723|gb|EEE79270.1|
            predicted protein [Populus trichocarpa]
          Length = 336

 Score =  152 bits (384), Expect(2) = 2e-60
 Identities = 72/78 (92%), Positives = 77/78 (98%)
 Frame = -2

Query: 1045 SSSRERKKGVPWTEEEHKMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQC 866
            SSSRERKKGVPWTEEEH+MFLLGLQKLGKGDWRGIARNYVI+RTPTQVASHAQKYFIRQ 
Sbjct: 92   SSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQS 151

Query: 865  NMSRRKRRSSLFDMIADE 812
            N+SRRKRRSSLFD++ADE
Sbjct: 152  NVSRRKRRSSLFDIVADE 169



 Score =  108 bits (270), Expect(2) = 2e-60
 Identities = 55/72 (76%), Positives = 57/72 (79%), Gaps = 8/72 (11%)
 Frame = -3

Query: 1353 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSSIRKSASMGNLTHYTGSNL------- 1195
            MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDG SIRKSASMGNL+HYTGS+        
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDG-SIRKSASMGNLSHYTGSSNVGGPLTS 59

Query: 1194 -RNGHDSPGDAP 1162
              N   SPGD P
Sbjct: 60   GPNNPGSPGDTP 71



 Score =  230 bits (587), Expect = 6e-58
 Identities = 114/173 (65%), Positives = 132/173 (76%), Gaps = 1/173 (0%)
 Frame = -2

Query: 553 DMIADESVETPMVSHDFFSVHPQEDENQTD-PMPAPAVEKECESMESANSNDAEASPPKP 377
           D++ADE  +TPM S DF S   QE E Q++ P+P P +++ECESM+S NSND E  PPKP
Sbjct: 164 DIVADEPGDTPMESQDFLSTIEQESEAQSENPVPVPPLDEECESMDSTNSNDGEPPPPKP 223

Query: 376 EISQYCYSVFYPAYVSPFVPSSYPYWSGCSTEPAKTESHVVLKPTAVHSKSPINVDELVG 197
           + SQ  Y V YP+Y SPF P S+P+WSG S EP KTE+H VLKPTAVHSKSPINVDELVG
Sbjct: 224 DCSQSAYPVVYPSYFSPFFPFSFPFWSGHSAEPTKTETHEVLKPTAVHSKSPINVDELVG 283

Query: 196 MSKLSLGTSIGHDGPSSLSVKLLEGSSRQSAFHAKPTAGNSGMTSGNSAIHAV 38
           MSKLSLG SIG DGPSSLS KLLEGS RQSAFHA P + +S M   +S IHAV
Sbjct: 284 MSKLSLGESIGQDGPSSLSQKLLEGSPRQSAFHANPASNSSSMNRSSSPIHAV 336


>ref|NP_001237520.1| MYB transcription factor MYB93 [Glycine max]
            gi|110931692|gb|ABH02845.1| MYB transcription factor
            MYB93 [Glycine max]
          Length = 333

 Score =  152 bits (384), Expect(2) = 3e-60
 Identities = 72/78 (92%), Positives = 77/78 (98%)
 Frame = -2

Query: 1045 SSSRERKKGVPWTEEEHKMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQC 866
            SSSRERKKGVPWTEEEH+MFLLGLQKLGKGDWRGIARNYVI+RTPTQVASHAQKYFIRQ 
Sbjct: 90   SSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQS 149

Query: 865  NMSRRKRRSSLFDMIADE 812
            N+SRRKRRSSLFD++ADE
Sbjct: 150  NVSRRKRRSSLFDIVADE 167



 Score =  107 bits (268), Expect(2) = 3e-60
 Identities = 54/70 (77%), Positives = 55/70 (78%), Gaps = 6/70 (8%)
 Frame = -3

Query: 1353 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSSIRKSASMGNLTHYTGSNLR------ 1192
            MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDG SIRKSASMGNLTHY GS         
Sbjct: 1    MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDG-SIRKSASMGNLTHYAGSGSAPLHVGL 59

Query: 1191 NGHDSPGDAP 1162
            N   SPG+ P
Sbjct: 60   NNPGSPGETP 69



 Score =  190 bits (482), Expect = 8e-46
 Identities = 104/176 (59%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
 Frame = -2

Query: 553 DMIADESVETPMVSHDFFSVHPQEDENQ-TDPMPAPA-VEKECESMESANSNDAEASPPK 380
           D++ADE+ +T MV  DF S +    E +  +P+PAP  +++ECESM+S NSND E +P K
Sbjct: 162 DIVADEAADTAMVQQDFLSANELPTETEGNNPLPAPPPLDEECESMDSTNSNDGEPAPSK 221

Query: 379 PEISQYCYSVFYPAYVSPFVPSSYPYWSGCSTEPA-KTESHVVLKPTAVHSKSPINVDEL 203
           PE +   Y + YPAY SP  P   PYWSG S EP  K E+H VLKPTAVHSKSPINVDEL
Sbjct: 222 PENTHPSYPMLYPAYYSPVFPFPLPYWSGYSPEPTKKEETHEVLKPTAVHSKSPINVDEL 281

Query: 202 VGMSKLSLGTSIGHDGPSSLSVKLL-EGSSRQSAFHAKPTAGNSGMTSGNSAIHAV 38
           VG+SKLSLG SIG  GPS+LS KL+ EG SRQSAFHA PT G+       SAIHAV
Sbjct: 282 VGISKLSLGESIGDSGPSTLSRKLIEEGPSRQSAFHATPTCGD----MNGSAIHAV 333


>gb|AAB32591.2| MybSt1 [Solanum tuberosum]
          Length = 342

 Score =  154 bits (388), Expect(2) = 6e-60
 Identities = 73/78 (93%), Positives = 77/78 (98%)
 Frame = -2

Query: 1045 SSSRERKKGVPWTEEEHKMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQC 866
            SSSRERKKGVPWTEEEH+MFLLGLQKLGKGDWRGIARNYVI+RTPTQVASHAQKYFIRQ 
Sbjct: 93   SSSRERKKGVPWTEEEHRMFLLGLQKLGKGDWRGIARNYVISRTPTQVASHAQKYFIRQS 152

Query: 865  NMSRRKRRSSLFDMIADE 812
            NMSRRKRRSSLFD++ADE
Sbjct: 153  NMSRRKRRSSLFDIVADE 170



 Score =  105 bits (261), Expect(2) = 6e-60
 Identities = 55/71 (77%), Positives = 56/71 (78%), Gaps = 7/71 (9%)
 Frame = -3

Query: 1353 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSSIRKSASMGNLTHYT-----GSNLRN 1189
            MTRRCSHCS NGHNSRTCPNRGVKLFGVRLTDG  IRKSASMGNLTH+      GS   N
Sbjct: 1    MTRRCSHCSTNGHNSRTCPNRGVKLFGVRLTDG-LIRKSASMGNLTHFASGSGGGSTPLN 59

Query: 1188 G--HDSPGDAP 1162
            G  HDSPGD P
Sbjct: 60   GVVHDSPGDTP 70



 Score =  203 bits (516), Expect = 1e-49
 Identities = 109/178 (61%), Positives = 132/178 (74%), Gaps = 6/178 (3%)
 Frame = -2

Query: 553 DMIADESVETPMVSHDFFSVHPQEDENQTDPM--PAPAVEKECESM---ESANSNDAEAS 389
           D++ADES +TPMVS DF +  P + E Q++ +  P PAV++ECESM    SANS D E +
Sbjct: 165 DIVADESGDTPMVSRDFLADDPAQAEMQSNNLLPPTPAVDEECESMGSAASANSIDGEHA 224

Query: 388 PPKPEISQYCYSVFYPAYVSPFVPSSYPYWSGCSTEPAKTESHVVLKPTAVHSKSPINVD 209
            P PE SQY + + YPAYV+PF P  YP W G + EPA  E+H VLKP AVHSKSPINVD
Sbjct: 225 LPIPESSQYQHPLVYPAYVAPFYPMPYPCWPGYTAEPAIAETHEVLKPIAVHSKSPINVD 284

Query: 208 ELVGMSKLSLGTSIGHDG-PSSLSVKLLEGSSRQSAFHAKPTAGNSGMTSGNSAIHAV 38
           ELVGMSKLSLG SIG    P SLS+KL+EGSSRQSAFHA P++G+SGM S ++ IHAV
Sbjct: 285 ELVGMSKLSLGESIGDAAKPPSLSLKLVEGSSRQSAFHANPSSGSSGMNSSHNPIHAV 342


>gb|ABD65013.1| myb family transcription factor [Brassica oleracea]
          Length = 351

 Score =  148 bits (374), Expect(2) = 1e-59
 Identities = 71/78 (91%), Positives = 74/78 (94%)
 Frame = -2

Query: 1045 SSSRERKKGVPWTEEEHKMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQC 866
            SSSRERKKG PWTEEEH+MFLLGLQKLGKGDWRGI+RNYV TRTPTQVASHAQKYFIRQ 
Sbjct: 84   SSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVNTRTPTQVASHAQKYFIRQS 143

Query: 865  NMSRRKRRSSLFDMIADE 812
            N+SRRKRRSSLFDMI DE
Sbjct: 144  NVSRRKRRSSLFDMIPDE 161



 Score =  109 bits (272), Expect(2) = 1e-59
 Identities = 53/65 (81%), Positives = 57/65 (87%), Gaps = 1/65 (1%)
 Frame = -3

Query: 1353 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSSIRKSASMGNLTHYTGSNL-RNGHDS 1177
            MTRRCSHC+HNGHNSRTCPNRGVKLFGVRLT+G SIRKSASMGNL+HYTGS    +G  S
Sbjct: 1    MTRRCSHCNHNGHNSRTCPNRGVKLFGVRLTEG-SIRKSASMGNLSHYTGSGSGGHGSGS 59

Query: 1176 PGDAP 1162
            PGD P
Sbjct: 60   PGDVP 64



 Score =  111 bits (277), Expect = 5e-22
 Identities = 80/210 (38%), Positives = 108/210 (51%), Gaps = 38/210 (18%)
 Frame = -2

Query: 553 DMIADESVETPMVSHDFFSVHPQEDENQTDPMP-------------------APAVEK-- 437
           DMI DE  + PM          QE E +  P+                    AP++ +  
Sbjct: 156 DMIPDEGEDVPM--------DQQEPEAENTPVETLMQSSDSVHQTLAFSSRQAPSILEID 207

Query: 436 ECESMESANSNDAEASP---------------PKPEISQYCYSVFYPAYVSPFVPSSYPY 302
           ECESM+S NS   E S                 +P++  +   + YPAY SP+ P  YP 
Sbjct: 208 ECESMDSTNSTTGEPSSIAAAASSSTSILEETTQPQLQSF--PILYPAYFSPYYPFPYPI 265

Query: 301 W-SGCSTEPAKTE-SHVVLKPTAVHSKSPINVDELVGMSKLSLGTSIGHDGPSSLSVKLL 128
           W +G   EP K E +H +L+PTAVHSK+PINVDEL+GMSKLSLG S   +G S  S+ L 
Sbjct: 266 WPAGYVPEPTKKEETHEILRPTAVHSKAPINVDELLGMSKLSLGESKKKNGESDQSLSLK 325

Query: 127 EGSSRQSAFHAKPTAGNSGMTSGNSAIHAV 38
            G +RQSAF   P++ +S +T   + +HAV
Sbjct: 326 LG-TRQSAFQPNPSSDSSDIT---NVVHAV 351


>ref|XP_002865122.1| myb family transcription factor [Arabidopsis lyrata subsp. lyrata]
            gi|297310957|gb|EFH41381.1| myb family transcription
            factor [Arabidopsis lyrata subsp. lyrata]
          Length = 366

 Score =  150 bits (378), Expect(2) = 3e-59
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = -2

Query: 1045 SSSRERKKGVPWTEEEHKMFLLGLQKLGKGDWRGIARNYVITRTPTQVASHAQKYFIRQC 866
            SSSRERKKG PWTEEEH+MFLLGLQKLGKGDWRGI+RNYV TRTPTQVASHAQKYFIRQ 
Sbjct: 87   SSSRERKKGTPWTEEEHRMFLLGLQKLGKGDWRGISRNYVTTRTPTQVASHAQKYFIRQS 146

Query: 865  NMSRRKRRSSLFDMIADEI 809
            N+SRRKRRSSLFDM+ DE+
Sbjct: 147  NVSRRKRRSSLFDMVPDEV 165



 Score =  106 bits (265), Expect(2) = 3e-59
 Identities = 54/71 (76%), Positives = 57/71 (80%), Gaps = 7/71 (9%)
 Frame = -3

Query: 1353 MTRRCSHCSHNGHNSRTCPNRGVKLFGVRLTDGSSIRKSASMGNLTHYTGSNLRNGH--- 1183
            MTRRCSHC+HNGHNSRTCPNRGVKLFGVRLT+G SIRKSASMGNL+HYTGS    GH   
Sbjct: 1    MTRRCSHCNHNGHNSRTCPNRGVKLFGVRLTEG-SIRKSASMGNLSHYTGSG-SGGHGTG 58

Query: 1182 ----DSPGDAP 1162
                 SPGD P
Sbjct: 59   SNTPGSPGDVP 69



 Score =  105 bits (263), Expect = 2e-20
 Identities = 79/192 (41%), Positives = 105/192 (54%), Gaps = 27/192 (14%)
 Frame = -2

Query: 532 VETPMVSHDFFSVHPQEDENQTDPMPAPAVEKECESMESANSNDAEASP----------- 386
           VET M   D  SVH Q     T   P+    +ECESM+S NS + E +            
Sbjct: 182 VETEMQGAD--SVH-QTLAPGTLQAPSILEIEECESMDSTNSTNGEPTATAAAASSSSSR 238

Query: 385 ------------PKPEISQYCYSVFYPAYVSPFVPSSYPYW-SGCSTEPAKTE-SHVVLK 248
                       P+P++    + + YP Y SP+ P  +P W +G   EP K E +H +L+
Sbjct: 239 LEETTQLQSQLQPQPQLPG-SFPILYPTYFSPYYPFPFPIWPAGYVPEPPKKEETHEILR 297

Query: 247 PTAVHSKSPINVDELVGMSKLSLGTSIGH-DGPSSLSVKLLEG-SSRQSAFHAKPTAGNS 74
           PTAVHSK+PINVDEL+GMSKLSL  S  + +   SLS+KL  G SSRQSAFH  P++ +S
Sbjct: 298 PTAVHSKAPINVDELLGMSKLSLAESNKNGESDQSLSLKLGGGSSSRQSAFHPNPSSDSS 357

Query: 73  GMTSGNSAIHAV 38
            +    S IHA+
Sbjct: 358 DI---KSVIHAL 366


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