BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005223
         (1042 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_612578.1| Inclusion body matrix protein [Carnation etched...    63   1e-07
ref|YP_006907835.1| inclusion body matrix protein [Horseradish l...    57   1e-05

>ref|NP_612578.1| Inclusion body matrix protein [Carnation etched ring virus]
            gi|124051|sp|P05401.1|IBMP_CERV RecName:
            Full=Transactivator/viroplasmin protein; Short=Tav;
            AltName: Full=Inclusion body matrix protein
            gi|58864|emb|CAA28361.1| unnamed protein product
            [Carnation etched ring virus] gi|225357|prf||1301227F ORF
            6
          Length = 496

 Score = 62.8 bits (151), Expect = 1e-07
 Identities = 66/241 (27%), Positives = 97/241 (40%), Gaps = 49/241 (20%)
 Frame = +1

Query: 463  GKYNKPKGYYVAFNDPYPGIFKFMVPRGTSH*QLSSFGTGSM--YKDFQQA*EAAKLYTE 636
            G  N  K +YV +N PY GI+      GT+    +     S   +KD   A  +A +YT 
Sbjct: 126  GIQNPKKDFYVVYNGPYAGIYDHW---GTAKKATNKIPGVSYKKFKDMLSARTSADIYTN 182

Query: 637  AEFKPPLAV---GYQHSRSIASTPTERR*KMN*--------------------------- 726
            A+F   L          +S A   T R   M                             
Sbjct: 183  AQFGEKLKYIPGATTSPKSFAEALTTRPSNMKSLGKPKFIKIEEDDDVGFNPEFDLKSFL 242

Query: 727  -----GDN---------RYWTSDKKKTISVIYQSLSRCRSRNGS*SIHFRNYIYPSANLL 864
                 G N         R +T DKK+   + + + S       S       +IYPS NL 
Sbjct: 243  YIYKYGRNLEEEHFLTDRAFTIDKKEISYLNFVNNSDPEGILESFKAGLVRFIYPSTNLQ 302

Query: 865  EIKYFPELFKKAVIQFRKKCVK-GDKEIFIKFHSTLFLWIEHEEENSNGIS--PFHYVQI 1035
            E++  P++ K +V +FRKKC+K  +KEIF+K  ST+  W ++     + +S  P + VQI
Sbjct: 303  ELRLLPKVLKSSVQRFRKKCIKDSEKEIFLKIKSTIPCWEDYYNGLDDSVSYRPNYLVQI 362

Query: 1036 G 1038
            G
Sbjct: 363  G 363


>ref|YP_006907835.1| inclusion body matrix protein [Horseradish latent virus]
           gi|57790328|gb|AAW56090.1| inclusion body matrix protein
           [Horseradish latent virus]
          Length = 524

 Score = 56.6 bits (135), Expect = 1e-05
 Identities = 34/91 (37%), Positives = 48/91 (52%), Gaps = 7/91 (7%)
 Frame = +1

Query: 727 GDNRYWTSDKKKTISVIY------QSLSRCRSRNGS*SIHFRNYIYPSANLLEIKYFPEL 888
           GD  ++T+DKK      +      Q +S C              IYPSANL EIKY P+ 
Sbjct: 264 GDTTFFTTDKKNISMFNFLKNADPQMISECFQAG------LIKTIYPSANLQEIKYLPKK 317

Query: 889 FKKAVIQFRKKCVKG-DKEIFIKFHSTLFLW 978
            K AV ++R  C+K  +K+IF+K  ST+ +W
Sbjct: 318 IKDAVKKYRTNCIKNTEKDIFLKIKSTIPVW 348