BLASTX nr result

ID: Bupleurum21_contig00005206 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005206
         (429 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera] g...    59   5e-07
ref|XP_004138894.1| PREDICTED: protein pelota-like [Cucumis sati...    57   1e-06
ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family prote...    57   1e-06
ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arab...    57   1e-06
ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|22354...    57   1e-06

>ref|XP_002279875.1| PREDICTED: protein pelota [Vitis vinifera]
           gi|297735305|emb|CBI17667.3| unnamed protein product
           [Vitis vinifera]
          Length = 378

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 29/51 (56%), Positives = 35/51 (68%)
 Frame = +2

Query: 269 SDSCVDGEIAVVMMQEGRAEIFLIGPNATITCCRSEASIPRKHGPDFAYFE 421
           SD     ++AVV+MQEG A + LIG + TIT  R EASIPRKHGP  A +E
Sbjct: 129 SDPAASADLAVVLMQEGLAHVILIGRSLTITRSRIEASIPRKHGPAIAGYE 179


>ref|XP_004138894.1| PREDICTED: protein pelota-like [Cucumis sativus]
           gi|449477765|ref|XP_004155116.1| PREDICTED: protein
           pelota-like [Cucumis sativus]
          Length = 379

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/51 (52%), Positives = 34/51 (66%)
 Frame = +2

Query: 269 SDSCVDGEIAVVMMQEGRAEIFLIGPNATITCCRSEASIPRKHGPDFAYFE 421
           SD     ++AVV+MQEG A + L+G + TIT  R E SIPRKHGP  A +E
Sbjct: 130 SDPAASADLAVVLMQEGLAHVLLVGKSMTITRARIETSIPRKHGPAIAGYE 180


>ref|NP_194495.3| Eukaryotic release factor 1 (eRF1) family protein [Arabidopsis
           thaliana] gi|3941543|gb|AAC82379.1| pelota [Arabidopsis
           thaliana] gi|4469016|emb|CAB38277.1| pelota (PEL1)
           [Arabidopsis thaliana] gi|7269619|emb|CAB81415.1| pelota
           (PEL1) [Arabidopsis thaliana] gi|18377690|gb|AAL66995.1|
           putative pelota (PEL1) protein [Arabidopsis thaliana]
           gi|20465995|gb|AAM20219.1| putative pelota protein
           (PEL1) [Arabidopsis thaliana]
           gi|332659974|gb|AEE85374.1| Eukaryotic release factor 1
           (eRF1) family protein [Arabidopsis thaliana]
          Length = 378

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +2

Query: 257 IARPSDSCVDGEIAVVMMQEGRAEIFLIGPNATITCCRSEASIPRKHGPDFAYFE 421
           + + SD     ++AVV+MQEG A+IFL+G + T +  R E SIPRKHGP  A +E
Sbjct: 125 LKQASDPAASADLAVVLMQEGLAQIFLVGRSVTSSRARIETSIPRKHGPAIAGYE 179


>ref|XP_002867488.1| hypothetical protein ARALYDRAFT_492022 [Arabidopsis lyrata subsp.
           lyrata] gi|297313324|gb|EFH43747.1| hypothetical protein
           ARALYDRAFT_492022 [Arabidopsis lyrata subsp. lyrata]
          Length = 378

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 27/55 (49%), Positives = 37/55 (67%)
 Frame = +2

Query: 257 IARPSDSCVDGEIAVVMMQEGRAEIFLIGPNATITCCRSEASIPRKHGPDFAYFE 421
           + + SD     ++AVV+MQEG A+IFL+G + T +  R E SIPRKHGP  A +E
Sbjct: 125 LKQASDPAASADLAVVLMQEGLAQIFLVGRSVTSSRARIETSIPRKHGPAIAGYE 179


>ref|XP_002512614.1| pelota, putative [Ricinus communis] gi|223548575|gb|EEF50066.1|
           pelota, putative [Ricinus communis]
          Length = 378

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 28/55 (50%), Positives = 37/55 (67%)
 Frame = +2

Query: 257 IARPSDSCVDGEIAVVMMQEGRAEIFLIGPNATITCCRSEASIPRKHGPDFAYFE 421
           +++ SD     ++AVV+MQEG A IFL+G + T T  R E SIPRKHGP  A +E
Sbjct: 125 LSQASDPGASADLAVVLMQEGLAHIFLVGKSMTSTRSRIETSIPRKHGPAIAGYE 179


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