BLASTX nr result

ID: Bupleurum21_contig00005194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005194
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528895.1| transcription factor, putative [Ricinus comm...   365   2e-98
gb|ADL36578.1| ARF domain class transcription factor [Malus x do...   358   2e-96
ref|XP_004143431.1| PREDICTED: auxin-responsive protein IAA9-lik...   329   9e-88
ref|XP_003534264.1| PREDICTED: auxin-responsive protein IAA8-lik...   293   7e-77
gb|AAM12952.1| auxin-regulated protein [Zinnia violacea]              290   6e-76

>ref|XP_002528895.1| transcription factor, putative [Ricinus communis]
           gi|223531649|gb|EEF33475.1| transcription factor,
           putative [Ricinus communis]
          Length = 382

 Score =  365 bits (936), Expect = 2e-98
 Identities = 191/298 (64%), Positives = 226/298 (75%), Gaps = 3/298 (1%)
 Frame = -1

Query: 887 MSPPLLSVEGIGQGNVSLMASQVSVDCLSPTGLGLKERNYLGLXXXXXXXXXXXSNISKE 708
           MSPPLL VE  GQ  VSL+AS  SVDC+S  G  LKERNYLGL            ++S+E
Sbjct: 1   MSPPLLGVEDGGQSKVSLVASSPSVDCISQNGCRLKERNYLGLSDCSSVDSSAVPSLSEE 60

Query: 707 NKNNLNLKATELRLGLPGSQSPEKEPELNLLGTGKLDEKHLFPLAPSKDG--ICLSSQKN 534
           N NNLNLKATELRLGLPGS SPE++ E++LL +GKLDEK LFPL P KDG  IC   QK+
Sbjct: 61  NNNNLNLKATELRLGLPGSLSPERDTEVSLLISGKLDEKPLFPLLPLKDGHGICSLPQKH 120

Query: 533 VVSGNKRGFSDTMDGFSEIKGPSYTEGNWMFNATRTDSETVQPVGLGKFSGSASINAMLS 354
           VVSGNKRGFSDTMDGFSE+KG +Y+E NW+F++  T+S++ Q VG GKFSG++ IN MLS
Sbjct: 121 VVSGNKRGFSDTMDGFSEVKGSAYSEKNWLFHSAGTESDSPQSVGQGKFSGASGINTMLS 180

Query: 353 SGSAVTHTAFVKEVPKGALEVGHHMKTGTAHKMNGSNNNT-SAPAAKAQVIGWPPIRSFR 177
           S  +   +  +KEV    L+        T     G++N++ SAPAAKAQV+GWPPI+SFR
Sbjct: 181 SRPSGPQSTLIKEVAHNVLQDRSLAANATKLNQTGTSNHSGSAPAAKAQVVGWPPIKSFR 240

Query: 176 KNTLATSSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLRIYSTYQELSSALEKMFS 3
           KNTLAT+SKNN+EVDGKPGPG LFVKVSMDGAPYLRKVDLR +STYQELS ALEKMFS
Sbjct: 241 KNTLATTSKNNDEVDGKPGPGTLFVKVSMDGAPYLRKVDLRTHSTYQELSRALEKMFS 298


>gb|ADL36578.1| ARF domain class transcription factor [Malus x domestica]
          Length = 373

 Score =  358 bits (918), Expect = 2e-96
 Identities = 191/295 (64%), Positives = 221/295 (74%)
 Frame = -1

Query: 887 MSPPLLSVEGIGQGNVSLMASQVSVDCLSPTGLGLKERNYLGLXXXXXXXXXXXSNISKE 708
           MSPPLL  E  GQ N S++A   S+DC+S    GLKERNYLGL           SN+S+ 
Sbjct: 1   MSPPLLGGEEEGQSNGSMVAFSRSMDCISQNSSGLKERNYLGLSDCSSVDSSTVSNLSEG 60

Query: 707 NKNNLNLKATELRLGLPGSQSPEKEPELNLLGTGKLDEKHLFPLAPSKDGICLSSQKNVV 528
            KNNLN KATELRLGLPGSQSPE+EP+L LL +GKLDEK LFPL PSKDGIC SSQKN  
Sbjct: 61  TKNNLNFKATELRLGLPGSQSPEREPDLCLLNSGKLDEKPLFPLLPSKDGICSSSQKN-- 118

Query: 527 SGNKRGFSDTMDGFSEIKGPSYTEGNWMFNATRTDSETVQPVGLGKFSGSASINAMLSSG 348
            GNKRGF+DTMDGFSE+K  +YTEGNWMF+A  +DSE+ + VG GKF  + SIN +LSS 
Sbjct: 119 -GNKRGFADTMDGFSEVKSNAYTEGNWMFHAAGSDSESPESVGQGKFPVN-SINVLLSSR 176

Query: 347 SAVTHTAFVKEVPKGALEVGHHMKTGTAHKMNGSNNNTSAPAAKAQVIGWPPIRSFRKNT 168
            +       KE      +   +   G +H   G++NN SAPAAKAQV+GWPPIRSFRKN+
Sbjct: 177 PSGCQPTITKEAR--TKQEQSNATNGGSHNPLGASNNGSAPAAKAQVVGWPPIRSFRKNS 234

Query: 167 LATSSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLRIYSTYQELSSALEKMFS 3
           LAT+SKNN+EV+GKPGPG LFVKVSMDGAPYLRKVDLR YSTYQ+LSSALEKMFS
Sbjct: 235 LATTSKNNDEVNGKPGPGGLFVKVSMDGAPYLRKVDLRTYSTYQDLSSALEKMFS 289


>ref|XP_004143431.1| PREDICTED: auxin-responsive protein IAA9-like [Cucumis sativus]
           gi|449499818|ref|XP_004160925.1| PREDICTED:
           auxin-responsive protein IAA9-like [Cucumis sativus]
          Length = 380

 Score =  329 bits (843), Expect = 9e-88
 Identities = 174/296 (58%), Positives = 211/296 (71%), Gaps = 1/296 (0%)
 Frame = -1

Query: 887 MSPPLLSVEGIGQGNVSLMASQVSVDCLSPTGLGLKERNYLGLXXXXXXXXXXXSNISKE 708
           MSPPLL+      GNV ++A+  S+DC S  G   +ERNYL L           SN+S+E
Sbjct: 1   MSPPLLNSVEEALGNVPVVAASPSMDCHSQNGTKFRERNYLRLSPCSSVDSSAVSNLSEE 60

Query: 707 NKNNLNLKATELRLGLPGSQSPEKEPELNLLGTGKLDEKHLFPLAPSKDGICLSSQKNVV 528
           NK+NLNLKATELRLGLPGS SPE++ E  L+ + + DEK L  L PS DG  +S QKN+V
Sbjct: 61  NKSNLNLKATELRLGLPGSLSPERDQEFTLISSVEPDEKTLLQLLPSTDGYSVSLQKNIV 120

Query: 527 SGNKRGFSDTMDGFSEIKGPSYTEGNWMFNATRTDSETVQPVGLGKFSGSASINAMLSSG 348
           SG+KR FSDTM+G+SE+KGP YTE NWMF+A  +D E+  PV  GKF  ++ INAMLSS 
Sbjct: 121 SGSKRVFSDTMEGYSEVKGPLYTERNWMFHAASSDPESPYPVSQGKFHANSGINAMLSSR 180

Query: 347 SAVTHTAFVKEVP-KGALEVGHHMKTGTAHKMNGSNNNTSAPAAKAQVIGWPPIRSFRKN 171
           ++  H    KE+P KG  E     K         SN++ +APAAKAQV+GWPPI+SFRKN
Sbjct: 181 ASGPHPNITKELPSKGLQEWPCETKGSDNGNKGASNDHNNAPAAKAQVVGWPPIKSFRKN 240

Query: 170 TLATSSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLRIYSTYQELSSALEKMFS 3
           +  T+SKNN+EVDGKPG  ALFVKVSM+GAPYLRKVDLR YSTYQELSSALEKMFS
Sbjct: 241 SFVTNSKNNDEVDGKPGSSALFVKVSMEGAPYLRKVDLRTYSTYQELSSALEKMFS 296


>ref|XP_003534264.1| PREDICTED: auxin-responsive protein IAA8-like [Glycine max]
          Length = 354

 Score =  293 bits (749), Expect = 7e-77
 Identities = 165/297 (55%), Positives = 197/297 (66%), Gaps = 3/297 (1%)
 Frame = -1

Query: 887 MSPPLLSVEGIGQGNVSLMASQVSVDCLSPTGLGLKERNYLGLXXXXXXXXXXXS--NIS 714
           MSPP L  E  G+  V+  +SQ S+DC S  G GLKERNYLGL           +  ++ 
Sbjct: 1   MSPPTLVTEEEGRSTVASDSSQ-SLDCFSQNGAGLKERNYLGLSDCSSVDSCASTVPSLC 59

Query: 713 KENKNNLNLKATELRLGLPGSQSPEKEPELNLLGTGKLDEKHLFPLAPSKDGICLSSQKN 534
            E K N+NLKATELRLGLPG QSPE+EP+L  L + KLDEK LFPL P+KDGIC S QK 
Sbjct: 60  DEKKENMNLKATELRLGLPGFQSPEREPDLFSLSSPKLDEKPLFPLLPTKDGICSSGQKA 119

Query: 533 VVSGNKRGFSDTMDGFSEIKGPSYTEGNWMFNATRTDSETVQPVGLGKFSGSASINAMLS 354
           VVSGNKRGF+DTMDGFS+                            GKF+G+  +NA+LS
Sbjct: 120 VVSGNKRGFADTMDGFSQ----------------------------GKFAGNTGMNAVLS 151

Query: 353 SGSAVTHTAFVKEVPKGALEVGHHMKTGTAHKMNGSNNNTSAPAAKAQVIGWPPIRSFRK 174
              +    + +KE P    E       GT H   G++ + SAPA+KAQV+GWPPIRSFRK
Sbjct: 152 PRPSGAQPSAMKETPSKLSERPCSTNNGTGHNHTGASISGSAPASKAQVVGWPPIRSFRK 211

Query: 173 NTLA-TSSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLRIYSTYQELSSALEKMF 6
           N++A T++KNN+EVDGKPG GALFVKVSMDGAPYLRKVDLR Y+TYQELSSALEKMF
Sbjct: 212 NSMATTTNKNNDEVDGKPGVGALFVKVSMDGAPYLRKVDLRSYTTYQELSSALEKMF 268


>gb|AAM12952.1| auxin-regulated protein [Zinnia violacea]
          Length = 351

 Score =  290 bits (741), Expect = 6e-76
 Identities = 164/296 (55%), Positives = 198/296 (66%), Gaps = 1/296 (0%)
 Frame = -1

Query: 887 MSPPLLSVEGIGQGNVSLMASQVSVDCLSPTGLGLKERNYLGLXXXXXXXXXXXSNISKE 708
           M PPLL VEG G GNVSLM S  +++ +      L ERNYLGL           S IS+ 
Sbjct: 1   MPPPLLGVEGDGLGNVSLMTSASTMESIFQKNAELTERNYLGLSDCSSFDSTAVSGISEV 60

Query: 707 NKNNLNLKATELRLGLPGSQSPEKEPELNLLGTGKLDEKHLFPLAPSKDGICLSSQKNVV 528
            +NNLNLKATELRLGLPGSQSPE++ +++L+ +  LDEK LFPL PSKDGIC +SQK  V
Sbjct: 61  KRNNLNLKATELRLGLPGSQSPERDVDVDLVNSESLDEKPLFPLLPSKDGICSNSQKVFV 120

Query: 527 SGNKRGFSDTMDGFSEIKGPSYTEGNWMFNATRTDSETVQPVGLGKFSGSASINAMLSSG 348
           SGNKRGFSD +D           EG WMF ++ TDSET            +++N  +SSG
Sbjct: 121 SGNKRGFSDAID-----------EGKWMFGSSGTDSET------------SNMNGKISSG 157

Query: 347 SAVTHTAFVKE-VPKGALEVGHHMKTGTAHKMNGSNNNTSAPAAKAQVIGWPPIRSFRKN 171
           +       +K+   K   +   H   GT   +    N ++ PAAKAQV+GWPP+RSFRKN
Sbjct: 158 A---QPVMIKDATSKVVTQEQTHATFGTNLNI---VNTSNPPAAKAQVVGWPPVRSFRKN 211

Query: 170 TLATSSKNNEEVDGKPGPGALFVKVSMDGAPYLRKVDLRIYSTYQELSSALEKMFS 3
            LAT+SK N+EVDGKPGPGALFVKVSMDGAPYLRKVDLR YSTYQ+LSSA+EKMFS
Sbjct: 212 ILATNSKTNDEVDGKPGPGALFVKVSMDGAPYLRKVDLRSYSTYQQLSSAIEKMFS 267


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