BLASTX nr result

ID: Bupleurum21_contig00005191 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005191
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma...   576   e-162
emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]   571   e-160
ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma...   568   e-160
ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|2...   561   e-157
ref|NP_198008.1| TCP-1/cpn60 chaperonin family protein [Arabidop...   559   e-157

>ref|XP_002282991.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|297733798|emb|CBI15045.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  576 bits (1484), Expect = e-162
 Identities = 291/314 (92%), Positives = 306/314 (97%)
 Frame = -1

Query: 944 MQSPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 765
           MQ+PVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND
Sbjct: 1   MQAPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 764 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDKSYHPTVI 585
           GN+ILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDK++HPTVI
Sbjct: 61  GNSILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKNFHPTVI 120

Query: 584 CRAYSKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDIIADLALDATTT 405
           CRAY+KALEDA+AVL+KIA  +DVNDRVAMLG+VKSCIGTKFT QFGD+IADLALDATTT
Sbjct: 121 CRAYNKALEDAIAVLDKIAAPVDVNDRVAMLGMVKSCIGTKFTGQFGDLIADLALDATTT 180

Query: 404 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVVPGKMRRKIINPRIIL 225
           VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVV PGKMRRKIINPRIIL
Sbjct: 181 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVAPGKMRRKIINPRIIL 240

Query: 224 LDSPIEYKKGENQTNAELVNEEDWSVLLKMEEEYIENLCVQILKFKPDLVITEKGLSDLA 45
           LD P+EYKKGENQTNAELV EEDW +LLKMEEEYIENLC+QILKFKPDLVITEKGLSDLA
Sbjct: 241 LDCPLEYKKGENQTNAELVREEDWGILLKMEEEYIENLCMQILKFKPDLVITEKGLSDLA 300

Query: 44  CHYFSKAGVSAIRR 3
           CHY SKAGVSAIRR
Sbjct: 301 CHYLSKAGVSAIRR 314


>emb|CAN74796.1| hypothetical protein VITISV_000290 [Vitis vinifera]
          Length = 557

 Score =  571 bits (1471), Expect = e-160
 Identities = 289/314 (92%), Positives = 305/314 (97%)
 Frame = -1

Query: 944 MQSPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 765
           MQ+PVLVLKDSL RESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND
Sbjct: 1   MQAPVLVLKDSLKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 764 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDKSYHPTVI 585
           GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDKSYHPTVI
Sbjct: 61  GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVI 120

Query: 584 CRAYSKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDIIADLALDATTT 405
           CRAY+KALEDA+AVL+KIA+SIDV DR  +LGLVKSCIGTKFTSQFGD+IADLA+DATTT
Sbjct: 121 CRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADLAIDATTT 180

Query: 404 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVVPGKMRRKIINPRIIL 225
           VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDV+ PGKMRRKI+NPRIIL
Sbjct: 181 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIIL 240

Query: 224 LDSPIEYKKGENQTNAELVNEEDWSVLLKMEEEYIENLCVQILKFKPDLVITEKGLSDLA 45
           LD P+EYKKGENQTNAELV EEDW VLLKMEEEYIE++C+QILKFKPDLVITEKGLSDLA
Sbjct: 241 LDCPLEYKKGENQTNAELVKEEDWGVLLKMEEEYIESICMQILKFKPDLVITEKGLSDLA 300

Query: 44  CHYFSKAGVSAIRR 3
           CHY SKAGVSAIRR
Sbjct: 301 CHYLSKAGVSAIRR 314


>ref|XP_002268799.1| PREDICTED: T-complex protein 1 subunit gamma [Vitis vinifera]
           gi|296084839|emb|CBI27721.3| unnamed protein product
           [Vitis vinifera]
          Length = 557

 Score =  568 bits (1465), Expect = e-160
 Identities = 288/314 (91%), Positives = 304/314 (96%)
 Frame = -1

Query: 944 MQSPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 765
           MQ+PVLVLKDSL RESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND
Sbjct: 1   MQAPVLVLKDSLKRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 764 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDKSYHPTVI 585
           GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AFIDKSYHPTVI
Sbjct: 61  GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFIDKSYHPTVI 120

Query: 584 CRAYSKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDIIADLALDATTT 405
           CRAY+KALEDA+AVL+KIA+SIDV DR  +LGLVKSCIGTKFTSQFGD+IADLA+DAT T
Sbjct: 121 CRAYNKALEDAIAVLDKIAMSIDVKDRSTVLGLVKSCIGTKFTSQFGDLIADLAIDATMT 180

Query: 404 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVVPGKMRRKIINPRIIL 225
           VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDV+ PGKMRRKI+NPRIIL
Sbjct: 181 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVIAPGKMRRKIVNPRIIL 240

Query: 224 LDSPIEYKKGENQTNAELVNEEDWSVLLKMEEEYIENLCVQILKFKPDLVITEKGLSDLA 45
           LD P+EYKKGENQTNAELV EEDW VLLKMEEEYIE++C+QILKFKPDLVITEKGLSDLA
Sbjct: 241 LDCPLEYKKGENQTNAELVKEEDWGVLLKMEEEYIESICMQILKFKPDLVITEKGLSDLA 300

Query: 44  CHYFSKAGVSAIRR 3
           CHY SKAGVSAIRR
Sbjct: 301 CHYLSKAGVSAIRR 314


>ref|XP_002305345.1| predicted protein [Populus trichocarpa] gi|222848309|gb|EEE85856.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score =  561 bits (1445), Expect = e-157
 Identities = 285/314 (90%), Positives = 300/314 (95%)
 Frame = -1

Query: 944 MQSPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 765
           M +PVLVL+DSL RESG+KV HANIQA+KAVADIIRTTLGPRSMLKMLLDA GGIVVTND
Sbjct: 1   MHAPVLVLRDSLKRESGTKVHHANIQAAKAVADIIRTTLGPRSMLKMLLDASGGIVVTND 60

Query: 764 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDKSYHPTVI 585
           GNAILRELD+AHPAAKSMIELSRTQDEEVGDGTTSVIVL GEMLHVA+AFI+KSYHPTVI
Sbjct: 61  GNAILRELDLAHPAAKSMIELSRTQDEEVGDGTTSVIVLGGEMLHVAEAFIEKSYHPTVI 120

Query: 584 CRAYSKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDIIADLALDATTT 405
           CRAYSKALEDA+AVL+KIAVSIDVNDR AMLGLVKSCIGTKFTSQFGD+IADLA+DAT+T
Sbjct: 121 CRAYSKALEDAIAVLDKIAVSIDVNDRPAMLGLVKSCIGTKFTSQFGDLIADLAIDATST 180

Query: 404 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVVPGKMRRKIINPRIIL 225
           VGVDLGQGLREVDIKKYIKVEKVPG QLEDSKVLKGVM NKDVV PGKM+RKI NPRIIL
Sbjct: 181 VGVDLGQGLREVDIKKYIKVEKVPGSQLEDSKVLKGVMFNKDVVAPGKMKRKIPNPRIIL 240

Query: 224 LDSPIEYKKGENQTNAELVNEEDWSVLLKMEEEYIENLCVQILKFKPDLVITEKGLSDLA 45
           LD P+EYKKGENQTNAELV EEDW VLLKMEEEYIEN+CVQILKFKPDLVITEKGLSDLA
Sbjct: 241 LDCPVEYKKGENQTNAELVREEDWEVLLKMEEEYIENMCVQILKFKPDLVITEKGLSDLA 300

Query: 44  CHYFSKAGVSAIRR 3
           CHY SKAGVSAIRR
Sbjct: 301 CHYLSKAGVSAIRR 314


>ref|NP_198008.1| TCP-1/cpn60 chaperonin family protein [Arabidopsis thaliana]
           gi|27754225|gb|AAO22566.1| putative chaperonin gamma
           chain [Arabidopsis thaliana] gi|332006171|gb|AED93554.1|
           TCP-1/cpn60 chaperonin family protein [Arabidopsis
           thaliana]
          Length = 555

 Score =  559 bits (1441), Expect = e-157
 Identities = 281/314 (89%), Positives = 300/314 (95%)
 Frame = -1

Query: 944 MQSPVLVLKDSLTRESGSKVQHANIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 765
           M +PVLVL DSL RESGSKV H NIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND
Sbjct: 1   MHAPVLVLSDSLKRESGSKVHHGNIQASKAVADIIRTTLGPRSMLKMLLDAGGGIVVTND 60

Query: 764 GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVADAFIDKSYHPTVI 585
           GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVA+AF++K+YHPTVI
Sbjct: 61  GNAILRELDVAHPAAKSMIELSRTQDEEVGDGTTSVIVLAGEMLHVAEAFLEKNYHPTVI 120

Query: 584 CRAYSKALEDALAVLEKIAVSIDVNDRVAMLGLVKSCIGTKFTSQFGDIIADLALDATTT 405
           CRAY KALED++AVL+KIA+SID+NDR  +LGLVKSCIGTKFTSQFGD+IADLA+DATTT
Sbjct: 121 CRAYIKALEDSIAVLDKIAMSIDINDRSQVLGLVKSCIGTKFTSQFGDLIADLAIDATTT 180

Query: 404 VGVDLGQGLREVDIKKYIKVEKVPGGQLEDSKVLKGVMINKDVVVPGKMRRKIINPRIIL 225
           VGVDLGQGLREVDIKKYIKVEKVPGGQ EDS+VLKGVM NKDVV PGKM+RKI+NPRIIL
Sbjct: 181 VGVDLGQGLREVDIKKYIKVEKVPGGQFEDSEVLKGVMFNKDVVAPGKMKRKIVNPRIIL 240

Query: 224 LDSPIEYKKGENQTNAELVNEEDWSVLLKMEEEYIENLCVQILKFKPDLVITEKGLSDLA 45
           LD P+EYKKGENQTNAELV EEDW VLLK+EEEYIEN+CVQILKFKPDLVITEKGLSDLA
Sbjct: 241 LDCPLEYKKGENQTNAELVREEDWEVLLKLEEEYIENICVQILKFKPDLVITEKGLSDLA 300

Query: 44  CHYFSKAGVSAIRR 3
           CHYFSKAGVSAIRR
Sbjct: 301 CHYFSKAGVSAIRR 314


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