BLASTX nr result

ID: Bupleurum21_contig00005185 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005185
         (1354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316104.1| predicted protein [Populus trichocarpa] gi|2...   469   e-130
ref|XP_002311326.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128
ref|XP_002266340.1| PREDICTED: uncharacterized protein LOC100265...   465   e-128
gb|AFK47872.1| unknown [Medicago truncatula]                          459   e-127
ref|XP_003613965.1| Sporulation protein RMD1 [Medicago truncatul...   459   e-127

>ref|XP_002316104.1| predicted protein [Populus trichocarpa] gi|222865144|gb|EEF02275.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  469 bits (1208), Expect = e-130
 Identities = 243/318 (76%), Positives = 275/318 (86%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1184 RSFSAVPCPSPLYESEFET-NFDPDQKYLFDPDKDEDFGKIPVRAFFLSTSIDLKSMQAE 1008
            RSFSA+P    +Y +E E+ + D    Y   P +DE+ GKIPV+A+FL TSI+LKSMQAE
Sbjct: 48   RSFSAIPSRVSVYSNEIESGSHDLAINYDLGPKEDEESGKIPVKAYFLCTSINLKSMQAE 107

Query: 1007 NLSYVVPPSSRSSNYIALRFCDSSSN--SLGTVGKANSSRYMVVYQYGSAVLFNIEEHEV 834
            NLSYVVPP+SRS+NY+ L+F D SS+  +LG + +  S RYMVV+QYGSAVLFNIE+ +V
Sbjct: 108  NLSYVVPPTSRSTNYVVLKFFDFSSDISALG-IREYISCRYMVVFQYGSAVLFNIEDPDV 166

Query: 833  EYYLGFIRKHASGLLQEMRKDDYAVQEKPHLPYDMQGGADYIVLKSLDIDSIRIIGSVLG 654
            E YL  +R+H SGLL EMRKDDYA++EKP L  DMQGG DYIVLK+LD DSIRIIGSVLG
Sbjct: 167  ERYLEMVRRHTSGLLSEMRKDDYAIKEKPLLDEDMQGGLDYIVLKTLDTDSIRIIGSVLG 226

Query: 653  QSIALDYFVSQVDGMVEEFAGINRGMEKTGTFTMDRKKLFQLVGKANSNLADVILKVGLF 474
            QSIALDYFVSQVDGMVEEFAGINR MEKTGTF+MDRKKL QLVGKANSNLADVILKVGLF
Sbjct: 227  QSIALDYFVSQVDGMVEEFAGINRAMEKTGTFSMDRKKLLQLVGKANSNLADVILKVGLF 286

Query: 473  DRSEIAWRDAKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRKSDLLEW 294
            +RSEIAWRDAKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEV+QNR+SDLLEW
Sbjct: 287  ERSEIAWRDAKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVIQNRRSDLLEW 346

Query: 293  CIIILLSIENVIGMYEIV 240
            CII LLSIEN+I +YEIV
Sbjct: 347  CIIFLLSIENIISIYEIV 364


>ref|XP_002311326.1| predicted protein [Populus trichocarpa] gi|222851146|gb|EEE88693.1|
            predicted protein [Populus trichocarpa]
          Length = 366

 Score =  465 bits (1197), Expect = e-128
 Identities = 242/318 (76%), Positives = 272/318 (85%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1184 RSFSAVPCPSPLYESEFET-NFDPDQKYLFDPDKDEDFGKIPVRAFFLSTSIDLKSMQAE 1008
            R FSA+P    +Y +E E+ + D    Y   P +DE+ GKIPV+A+FL TSI+LKSMQAE
Sbjct: 48   RPFSAIPSRVSVYSNEIESGSHDLALNYPLGPKEDEETGKIPVKAYFLCTSINLKSMQAE 107

Query: 1007 NLSYVVPPSSRSSNYIALRFCDSSSN--SLGTVGKANSSRYMVVYQYGSAVLFNIEEHEV 834
            NLS VVPP+SRS+NY  LRF + SS+  +LG +G   S RYMVV+QYGSAVLFNIE+HEV
Sbjct: 108  NLSNVVPPTSRSTNYTVLRFFNFSSDISALG-IGGYVSCRYMVVFQYGSAVLFNIEDHEV 166

Query: 833  EYYLGFIRKHASGLLQEMRKDDYAVQEKPHLPYDMQGGADYIVLKSLDIDSIRIIGSVLG 654
            E YL  +R+H SGLL EMRKDDYA+ EKP L  DMQGG DYIVLK+LD DSIRIIGSVLG
Sbjct: 167  ERYLEIVRRHTSGLLSEMRKDDYAIIEKPLLAEDMQGGLDYIVLKTLDTDSIRIIGSVLG 226

Query: 653  QSIALDYFVSQVDGMVEEFAGINRGMEKTGTFTMDRKKLFQLVGKANSNLADVILKVGLF 474
            QSIALDYFVSQVDGMVEEF+GINR MEKTGTFTMDRKKL QLVGKANSNLADVILKVGLF
Sbjct: 227  QSIALDYFVSQVDGMVEEFSGINRAMEKTGTFTMDRKKLLQLVGKANSNLADVILKVGLF 286

Query: 473  DRSEIAWRDAKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRKSDLLEW 294
            +RSEIAWRDAKYAQIYEYLREEYEVTQRFG+LD+KLKFVEHNIHFLQEV+QNR+SDLLEW
Sbjct: 287  ERSEIAWRDAKYAQIYEYLREEYEVTQRFGSLDYKLKFVEHNIHFLQEVIQNRRSDLLEW 346

Query: 293  CIIILLSIENVIGMYEIV 240
            CII LLSIEN+I +YEIV
Sbjct: 347  CIIFLLSIENIISIYEIV 364


>ref|XP_002266340.1| PREDICTED: uncharacterized protein LOC100265119 [Vitis vinifera]
            gi|297738194|emb|CBI27395.3| unnamed protein product
            [Vitis vinifera]
          Length = 374

 Score =  465 bits (1196), Expect = e-128
 Identities = 248/378 (65%), Positives = 293/378 (77%), Gaps = 4/378 (1%)
 Frame = -3

Query: 1340 MGRWGGFISSFARITKSIQNPSTRR-RRISPIVYIQSPVVYISGVPRFQFSNLRSFSAVP 1164
            MGRW   I     +T + + P+    R  +P+ Y+  P   IS     +F     FSA+P
Sbjct: 1    MGRWRCSILLGTLLTSTSKYPTPYFCRPFTPLRYLPFPSNPIS-----RFFRFFPFSALP 55

Query: 1163 CPSPLYESEFET-NFDPDQKYLFDPDKDEDFGKIPVRAFFLSTSIDLKSMQAENLSYVVP 987
             P+ +Y ++F + + D    Y+F P +D+   KIPV+AFFL TSIDL+SMQAE+ S +VP
Sbjct: 56   SPASVYANDFVSGSHDFPHDYIFQPREDDGSEKIPVKAFFLCTSIDLRSMQAEHWSNIVP 115

Query: 986  PSSRSSNYIALRFCDSSSNSLGTVGKANSS--RYMVVYQYGSAVLFNIEEHEVEYYLGFI 813
            PSSRS+NYI LR+ D  S   G  G+ N     YMVV+QYGSAVLFNI ++EVE YL  +
Sbjct: 116  PSSRSANYIVLRYYDFPSEITGIGGEDNVGCCHYMVVFQYGSAVLFNIVDNEVEAYLKIV 175

Query: 812  RKHASGLLQEMRKDDYAVQEKPHLPYDMQGGADYIVLKSLDIDSIRIIGSVLGQSIALDY 633
            R++ASGLL EMRKDDYAV++ P L  DMQGG DYIVLK+LDID IRIIG VLGQSIALDY
Sbjct: 176  RRYASGLLPEMRKDDYAVKQNPVLAEDMQGGTDYIVLKNLDIDGIRIIGRVLGQSIALDY 235

Query: 632  FVSQVDGMVEEFAGINRGMEKTGTFTMDRKKLFQLVGKANSNLADVILKVGLFDRSEIAW 453
            FVSQ+DGMVEEF  INRGMEKTGTFTMDR+KLFQLVGKANSNLADVILKVGLF+RSEIAW
Sbjct: 236  FVSQIDGMVEEFTDINRGMEKTGTFTMDRRKLFQLVGKANSNLADVILKVGLFERSEIAW 295

Query: 452  RDAKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRKSDLLEWCIIILLS 273
            RDAKYAQI+EYL EEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNR+S+LLEWCII L+ 
Sbjct: 296  RDAKYAQIFEYLWEEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRRSNLLEWCIIYLIF 355

Query: 272  IENVIGMYEIVHESTAIA 219
            IENVI +YEI+HE TA++
Sbjct: 356  IENVISIYEIIHEPTAVS 373


>gb|AFK47872.1| unknown [Medicago truncatula]
          Length = 356

 Score =  459 bits (1182), Expect = e-127
 Identities = 249/376 (66%), Positives = 290/376 (77%), Gaps = 3/376 (0%)
 Frame = -3

Query: 1337 GRWGGFISSFARITKSIQNPSTRRRRISPIVYIQSPVVYISGVPRFQFSNLRSFSAVPCP 1158
            GRW   +SS          P+T  R  S      SP+++    P F F+   + +A+P  
Sbjct: 3    GRWIKTLSSLLYNNNHRHIPTTTTRSSSS----SSPLLF---TPHFLFNRFLTVAAIP-- 53

Query: 1157 SPLYESEFETNFDPDQKYLFDPDKDEDFGKIPVRAFFLSTSIDLKSMQAENLSYVVPPSS 978
                        DPD  ++ +P+ D+   KIP++AFFLSTSI+LK +QA+N   VVPPSS
Sbjct: 54   -----------LDPDPIHI-EPE-DDPHVKIPIKAFFLSTSINLKGIQADNPRNVVPPSS 100

Query: 977  RS-SNYIALRFCD--SSSNSLGTVGKANSSRYMVVYQYGSAVLFNIEEHEVEYYLGFIRK 807
            RS SNY+ALRFC+  S +N  G   KA++ RYMVVYQYGSAVLFNIE+HEV+ YL  +++
Sbjct: 101  RSASNYVALRFCNYNSDANGPGFHVKASNCRYMVVYQYGSAVLFNIEDHEVDIYLQLVKR 160

Query: 806  HASGLLQEMRKDDYAVQEKPHLPYDMQGGADYIVLKSLDIDSIRIIGSVLGQSIALDYFV 627
            HASGLL EMRKDDYA++EKP L  DM GG DYIVLKSLD D IR+IGSVLGQSIALDYFV
Sbjct: 161  HASGLLSEMRKDDYAIREKPQLVEDMLGGPDYIVLKSLDTDGIRLIGSVLGQSIALDYFV 220

Query: 626  SQVDGMVEEFAGINRGMEKTGTFTMDRKKLFQLVGKANSNLADVILKVGLFDRSEIAWRD 447
            SQVDG+VEEFAGINRGMEKTGTFTMD+KKL QLVGKANSNLADVILKVGLF+RSEIAWRD
Sbjct: 221  SQVDGLVEEFAGINRGMEKTGTFTMDKKKLLQLVGKANSNLADVILKVGLFERSEIAWRD 280

Query: 446  AKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRKSDLLEWCIIILLSIE 267
            AKYAQIYEYLREEYEV QRFGNLD+KLKFVEHNIHFLQEVLQNRKSD LEWCII LL+IE
Sbjct: 281  AKYAQIYEYLREEYEVAQRFGNLDYKLKFVEHNIHFLQEVLQNRKSDFLEWCIIGLLTIE 340

Query: 266  NVIGMYEIVHESTAIA 219
            NVI +YEI+ +S AI+
Sbjct: 341  NVISLYEILKDSNAIS 356


>ref|XP_003613965.1| Sporulation protein RMD1 [Medicago truncatula]
            gi|355515300|gb|AES96923.1| Sporulation protein RMD1
            [Medicago truncatula]
          Length = 412

 Score =  459 bits (1182), Expect = e-127
 Identities = 249/376 (66%), Positives = 290/376 (77%), Gaps = 3/376 (0%)
 Frame = -3

Query: 1337 GRWGGFISSFARITKSIQNPSTRRRRISPIVYIQSPVVYISGVPRFQFSNLRSFSAVPCP 1158
            GRW   +SS          P+T  R  S      SP+++    P F F+   + +A+P  
Sbjct: 59   GRWIKTLSSLLYNNNHRHIPTTTTRSSSS----SSPLLF---TPHFLFNRFLTVAAIP-- 109

Query: 1157 SPLYESEFETNFDPDQKYLFDPDKDEDFGKIPVRAFFLSTSIDLKSMQAENLSYVVPPSS 978
                        DPD  ++ +P+ D+   KIP++AFFLSTSI+LK +QA+N   VVPPSS
Sbjct: 110  -----------LDPDPIHI-EPE-DDPHVKIPIKAFFLSTSINLKGIQADNPRNVVPPSS 156

Query: 977  RS-SNYIALRFCD--SSSNSLGTVGKANSSRYMVVYQYGSAVLFNIEEHEVEYYLGFIRK 807
            RS SNY+ALRFC+  S +N  G   KA++ RYMVVYQYGSAVLFNIE+HEV+ YL  +++
Sbjct: 157  RSASNYVALRFCNYNSDANGPGFHVKASNCRYMVVYQYGSAVLFNIEDHEVDIYLQLVKR 216

Query: 806  HASGLLQEMRKDDYAVQEKPHLPYDMQGGADYIVLKSLDIDSIRIIGSVLGQSIALDYFV 627
            HASGLL EMRKDDYA++EKP L  DM GG DYIVLKSLD D IR+IGSVLGQSIALDYFV
Sbjct: 217  HASGLLSEMRKDDYAIREKPQLVEDMLGGPDYIVLKSLDTDGIRLIGSVLGQSIALDYFV 276

Query: 626  SQVDGMVEEFAGINRGMEKTGTFTMDRKKLFQLVGKANSNLADVILKVGLFDRSEIAWRD 447
            SQVDG+VEEFAGINRGMEKTGTFTMD+KKL QLVGKANSNLADVILKVGLF+RSEIAWRD
Sbjct: 277  SQVDGLVEEFAGINRGMEKTGTFTMDKKKLLQLVGKANSNLADVILKVGLFERSEIAWRD 336

Query: 446  AKYAQIYEYLREEYEVTQRFGNLDFKLKFVEHNIHFLQEVLQNRKSDLLEWCIIILLSIE 267
            AKYAQIYEYLREEYEV QRFGNLD+KLKFVEHNIHFLQEVLQNRKSD LEWCII LL+IE
Sbjct: 337  AKYAQIYEYLREEYEVAQRFGNLDYKLKFVEHNIHFLQEVLQNRKSDFLEWCIIGLLTIE 396

Query: 266  NVIGMYEIVHESTAIA 219
            NVI +YEI+ +S AI+
Sbjct: 397  NVISLYEILKDSNAIS 412


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