BLASTX nr result

ID: Bupleurum21_contig00005164 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005164
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268964.1| PREDICTED: uncharacterized protein LOC100260...   162   2e-38
ref|XP_002527804.1| conserved hypothetical protein [Ricinus comm...   147   1e-33
ref|XP_004146334.1| PREDICTED: uncharacterized protein LOC101202...   144   1e-32
ref|XP_002309011.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
gb|AFW90556.1| fiber protein Fb15 [Solanum tuberosum]                 143   2e-32

>ref|XP_002268964.1| PREDICTED: uncharacterized protein LOC100260603 isoform 1 [Vitis
           vinifera] gi|359484972|ref|XP_003633192.1| PREDICTED:
           uncharacterized protein LOC100260603 isoform 2 [Vitis
           vinifera]
          Length = 92

 Score =  162 bits (411), Expect = 2e-38
 Identities = 72/86 (83%), Positives = 83/86 (96%)
 Frame = -2

Query: 288 MAMRNFYNEIKGMRVKELPAHLKPMFTIDFLKSSVKKGLDSYHAKYIQTSSVDPLFHVCF 109
           MAMRNFYNEI+G++VKELPAH+KPMFTID++K S+ KGLD+YHAKYIQTSS+DPL HVC+
Sbjct: 1   MAMRNFYNEIRGLKVKELPAHVKPMFTIDYIKKSINKGLDNYHAKYIQTSSIDPLLHVCY 60

Query: 108 GGMIFSYLVALPEERRHLEHQQHAKE 31
           GG+IFSYLVALPEERRHLEHQQHAKE
Sbjct: 61  GGIIFSYLVALPEERRHLEHQQHAKE 86


>ref|XP_002527804.1| conserved hypothetical protein [Ricinus communis]
           gi|223532800|gb|EEF34576.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 89

 Score =  147 bits (370), Expect = 1e-33
 Identities = 65/86 (75%), Positives = 78/86 (90%)
 Frame = -2

Query: 288 MAMRNFYNEIKGMRVKELPAHLKPMFTIDFLKSSVKKGLDSYHAKYIQTSSVDPLFHVCF 109
           MA+R FYNEIKG++VKE+P H+KPM ++D+LK SV + LD+Y+ KYIQT S+DPL+HVCF
Sbjct: 1   MALRRFYNEIKGLKVKEVPNHVKPMLSLDYLKKSVGRALDNYNEKYIQTGSIDPLYHVCF 60

Query: 108 GGMIFSYLVALPEERRHLEHQQHAKE 31
           GGMIFSYLVALPEERRHLEHQQHAKE
Sbjct: 61  GGMIFSYLVALPEERRHLEHQQHAKE 86


>ref|XP_004146334.1| PREDICTED: uncharacterized protein LOC101202935 [Cucumis sativus]
           gi|449502973|ref|XP_004161794.1| PREDICTED:
           uncharacterized protein LOC101223947 isoform 1 [Cucumis
           sativus] gi|449502976|ref|XP_004161795.1| PREDICTED:
           uncharacterized protein LOC101223947 isoform 2 [Cucumis
           sativus]
          Length = 90

 Score =  144 bits (362), Expect = 1e-32
 Identities = 65/86 (75%), Positives = 79/86 (91%)
 Frame = -2

Query: 288 MAMRNFYNEIKGMRVKELPAHLKPMFTIDFLKSSVKKGLDSYHAKYIQTSSVDPLFHVCF 109
           MAM+ F++EIKG++VKELPA++KPM +ID  K +V++ LD+Y+AKYIQTSS+DPL HVCF
Sbjct: 1   MAMKQFFSEIKGLKVKELPAYVKPMLSIDAAKKAVERSLDNYNAKYIQTSSIDPLLHVCF 60

Query: 108 GGMIFSYLVALPEERRHLEHQQHAKE 31
           GGMIFSYLVALPEERRHLEHQQHAKE
Sbjct: 61  GGMIFSYLVALPEERRHLEHQQHAKE 86


>ref|XP_002309011.1| predicted protein [Populus trichocarpa] gi|222854987|gb|EEE92534.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score =  144 bits (362), Expect = 1e-32
 Identities = 60/86 (69%), Positives = 79/86 (91%)
 Frame = -2

Query: 288 MAMRNFYNEIKGMRVKELPAHLKPMFTIDFLKSSVKKGLDSYHAKYIQTSSVDPLFHVCF 109
           MA+R FY+EIKG++VKE P H+KPM ++D++K SV++G+D+YHAKYI+TSSVDP++HVCF
Sbjct: 1   MALRKFYSEIKGLKVKEFPNHVKPMLSLDYVKKSVQRGMDNYHAKYIETSSVDPVYHVCF 60

Query: 108 GGMIFSYLVALPEERRHLEHQQHAKE 31
           GGM+ SY +ALPEERRHLEHQQH+KE
Sbjct: 61  GGMVLSYFLALPEERRHLEHQQHSKE 86


>gb|AFW90556.1| fiber protein Fb15 [Solanum tuberosum]
          Length = 87

 Score =  143 bits (360), Expect = 2e-32
 Identities = 62/83 (74%), Positives = 77/83 (92%)
 Frame = -2

Query: 288 MAMRNFYNEIKGMRVKELPAHLKPMFTIDFLKSSVKKGLDSYHAKYIQTSSVDPLFHVCF 109
           MA+RN Y E+KG+++KE+PAHLKPM +I + K++++KGLD+YHAKYI+TSSVDPL HVCF
Sbjct: 1   MALRNLYKEMKGLKLKEVPAHLKPMLSIGYAKNAIRKGLDNYHAKYIETSSVDPLLHVCF 60

Query: 108 GGMIFSYLVALPEERRHLEHQQH 40
           GGMIFSYLVALPEERRHLEH+QH
Sbjct: 61  GGMIFSYLVALPEERRHLEHKQH 83


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