BLASTX nr result

ID: Bupleurum21_contig00005154 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005154
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|2...   154   5e-36
ref|NP_196488.1| vacuolar protein sorting-associated protein 20-...   154   9e-36
ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subs...   152   4e-35
ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associat...   151   5e-35
ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associat...   151   6e-35

>ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|222856497|gb|EEE94044.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  154 bits (390), Expect = 5e-36
 Identities = 86/118 (72%), Positives = 89/118 (75%)
 Frame = -3

Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177
           MGNIFVKKPKITDVDRAILSLKTQRRKL QYQQQLEAVI+AEKQAAKD            
Sbjct: 1   MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAAKDLIREKRKDRALL 60

Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3
                         VDTWLINVEQQLADIEL SKQKAVFESLKSG +AIKAIQSE+NL
Sbjct: 61  ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNL 118


>ref|NP_196488.1| vacuolar protein sorting-associated protein 20-2 [Arabidopsis
           thaliana] gi|75173205|sp|Q9FY89.1|VP202_ARATH RecName:
           Full=Vacuolar protein sorting-associated protein 20
           homolog 2; Short=AtVPS20-2; AltName: Full=Charged
           multivesicular body protein 6 homolog 2; AltName:
           Full=ESCRT-III complex subunit VPS20 homolog 2
           gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis
           thaliana] gi|34365667|gb|AAQ65145.1| At5g09260
           [Arabidopsis thaliana] gi|51969450|dbj|BAD43417.1|
           unknown protein [Arabidopsis thaliana]
           gi|332003983|gb|AED91366.1| vacuolar protein
           sorting-associated protein 20-2 [Arabidopsis thaliana]
          Length = 216

 Score =  154 bits (388), Expect = 9e-36
 Identities = 84/118 (71%), Positives = 89/118 (75%)
 Frame = -3

Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177
           MGN+FVKKPKIT+VDRAILSLKTQRRKLGQYQQQLE VI+AEKQAA+D            
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3
                         VD WLINVEQQLADIELTSKQKAVFESLK GNNAIKAIQSE+NL
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNL 118


>ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297317201|gb|EFH47623.1| SNF7 family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 217

 Score =  152 bits (383), Expect = 4e-35
 Identities = 83/118 (70%), Positives = 89/118 (75%)
 Frame = -3

Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177
           MGN+FVKKPKIT+VDRAILSLKTQRRKLGQYQQQLE VI+AEKQAA+D            
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3
                         VD WLINVEQQLADIELTSKQKAVFESLK GN+AIKAIQSE+NL
Sbjct: 61  ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNL 118


>ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2
           [Vitis vinifera] gi|296081514|emb|CBI20037.3| unnamed
           protein product [Vitis vinifera]
          Length = 226

 Score =  151 bits (382), Expect = 5e-35
 Identities = 83/118 (70%), Positives = 89/118 (75%)
 Frame = -3

Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177
           MGNIFVKKPKITDVDRAILSLKTQRRKL QYQQQL+AVI+AEKQAA+D            
Sbjct: 1   MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIREKKKDRALL 60

Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3
                         VD W+INVEQQLADIEL SKQKAVF+SLK+GNNAIKAIQSEINL
Sbjct: 61  ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINL 118


>ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog
           2-like [Cucumis sativus]
          Length = 223

 Score =  151 bits (381), Expect = 6e-35
 Identities = 81/118 (68%), Positives = 90/118 (76%)
 Frame = -3

Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177
           MGNIFVKKPK+TDVD+AILSLKTQRRKLGQYQQQL+AVI+AEK AA++            
Sbjct: 1   MGNIFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60

Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3
                         VDTWLINVEQQL+DIEL SKQKAVFESLK+GNNAIKAIQSEIN+
Sbjct: 61  ALKKKKAQEELLKQVDTWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI 118


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