BLASTX nr result
ID: Bupleurum21_contig00005154
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00005154 (421 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|2... 154 5e-36 ref|NP_196488.1| vacuolar protein sorting-associated protein 20-... 154 9e-36 ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subs... 152 4e-35 ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associat... 151 5e-35 ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associat... 151 6e-35 >ref|XP_002307048.1| predicted protein [Populus trichocarpa] gi|222856497|gb|EEE94044.1| predicted protein [Populus trichocarpa] Length = 222 Score = 154 bits (390), Expect = 5e-36 Identities = 86/118 (72%), Positives = 89/118 (75%) Frame = -3 Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177 MGNIFVKKPKITDVDRAILSLKTQRRKL QYQQQLEAVI+AEKQAAKD Sbjct: 1 MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLEAVIEAEKQAAKDLIREKRKDRALL 60 Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3 VDTWLINVEQQLADIEL SKQKAVFESLKSG +AIKAIQSE+NL Sbjct: 61 ALKKKKTQEELLKQVDTWLINVEQQLADIELASKQKAVFESLKSGTDAIKAIQSEVNL 118 >ref|NP_196488.1| vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] gi|75173205|sp|Q9FY89.1|VP202_ARATH RecName: Full=Vacuolar protein sorting-associated protein 20 homolog 2; Short=AtVPS20-2; AltName: Full=Charged multivesicular body protein 6 homolog 2; AltName: Full=ESCRT-III complex subunit VPS20 homolog 2 gi|9955513|emb|CAC05452.1| putative protein [Arabidopsis thaliana] gi|34365667|gb|AAQ65145.1| At5g09260 [Arabidopsis thaliana] gi|51969450|dbj|BAD43417.1| unknown protein [Arabidopsis thaliana] gi|332003983|gb|AED91366.1| vacuolar protein sorting-associated protein 20-2 [Arabidopsis thaliana] Length = 216 Score = 154 bits (388), Expect = 9e-36 Identities = 84/118 (71%), Positives = 89/118 (75%) Frame = -3 Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177 MGN+FVKKPKIT+VDRAILSLKTQRRKLGQYQQQLE VI+AEKQAA+D Sbjct: 1 MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60 Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3 VD WLINVEQQLADIELTSKQKAVFESLK GNNAIKAIQSE+NL Sbjct: 61 ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNNAIKAIQSEVNL 118 >ref|XP_002871364.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata] gi|297317201|gb|EFH47623.1| SNF7 family protein [Arabidopsis lyrata subsp. lyrata] Length = 217 Score = 152 bits (383), Expect = 4e-35 Identities = 83/118 (70%), Positives = 89/118 (75%) Frame = -3 Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177 MGN+FVKKPKIT+VDRAILSLKTQRRKLGQYQQQLE VI+AEKQAA+D Sbjct: 1 MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60 Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3 VD WLINVEQQLADIELTSKQKAVFESLK GN+AIKAIQSE+NL Sbjct: 61 ALKKKRTQEELLKQVDQWLINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNL 118 >ref|XP_002270590.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2 [Vitis vinifera] gi|296081514|emb|CBI20037.3| unnamed protein product [Vitis vinifera] Length = 226 Score = 151 bits (382), Expect = 5e-35 Identities = 83/118 (70%), Positives = 89/118 (75%) Frame = -3 Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177 MGNIFVKKPKITDVDRAILSLKTQRRKL QYQQQL+AVI+AEKQAA+D Sbjct: 1 MGNIFVKKPKITDVDRAILSLKTQRRKLAQYQQQLDAVIEAEKQAARDLIREKKKDRALL 60 Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3 VD W+INVEQQLADIEL SKQKAVF+SLK+GNNAIKAIQSEINL Sbjct: 61 ALKKKKAQEELLKQVDAWVINVEQQLADIELASKQKAVFDSLKAGNNAIKAIQSEINL 118 >ref|XP_004156001.1| PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2-like [Cucumis sativus] Length = 223 Score = 151 bits (381), Expect = 6e-35 Identities = 81/118 (68%), Positives = 90/118 (76%) Frame = -3 Query: 356 MGNIFVKKPKITDVDRAILSLKTQRRKLGQYQQQLEAVIDAEKQAAKDXXXXXXXXXXXX 177 MGNIFVKKPK+TDVD+AILSLKTQRRKLGQYQQQL+AVI+AEK AA++ Sbjct: 1 MGNIFVKKPKVTDVDKAILSLKTQRRKLGQYQQQLDAVIEAEKNAARELVRQKKKDRALL 60 Query: 176 XXXXXXXXXXXXXXVDTWLINVEQQLADIELTSKQKAVFESLKSGNNAIKAIQSEINL 3 VDTWLINVEQQL+DIEL SKQKAVFESLK+GNNAIKAIQSEIN+ Sbjct: 61 ALKKKKAQEELLKQVDTWLINVEQQLSDIELASKQKAVFESLKAGNNAIKAIQSEINI 118