BLASTX nr result

ID: Bupleurum21_contig00005146 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005146
         (903 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   217   3e-54
ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
ref|XP_002276181.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   172   1e-40
emb|CAN73757.1| hypothetical protein VITISV_026326 [Vitis vinifera]   172   1e-40
gb|ABK95116.1| unknown [Populus trichocarpa]                          171   2e-40

>ref|XP_002282578.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
           gi|297737819|emb|CBI27020.3| unnamed protein product
           [Vitis vinifera]
          Length = 432

 Score =  217 bits (552), Expect = 3e-54
 Identities = 131/310 (42%), Positives = 177/310 (57%), Gaps = 17/310 (5%)
 Frame = +2

Query: 23  NLAPAWQCGFARKARTPRHPKPV----HKDKQRSRNVLSLVPEMGNECHMFEETEAHLYY 190
           N  P+W  GF RKARTPRH KP      K  + +RN L  VPE+G +   +++ E  L Y
Sbjct: 76  NSMPSWHQGFTRKARTPRHGKPAAHPAFKSDELTRNPLPFVPEIGADETSYDDNEEQLLY 135

Query: 191 RVPIFDPFAAEVCNASNETENTMKVSKDTSLSHQKESD-------KGCDMNTLPEVHLPS 349
           RVPIFDPF AE+C ++N  E    V+ DT  +    S+       +G D+++L    LPS
Sbjct: 136 RVPIFDPFVAELCASTNSNEAVTTVANDTETADVTGSETKALVAGRGHDVDSL-HGFLPS 194

Query: 350 DIELAEFAVDVETLLGMGFNEES-SQVGLELIDCKEESELGNSYQENRVKVEDEEVQAAI 526
           D++LAEFA DVE+LLG G + ES    GL LIDCKE+  +  S    RVK+E+EE    +
Sbjct: 195 DMDLAEFAADVESLLGKGLDNESFGMEGLGLIDCKEKESVEYSLHSGRVKLEEEEDIGGV 254

Query: 527 TACGFDSEVDMSRESFDWNFSYESPLVEDDGSAEEKVMALAETMNDESEESIQNMKI-LR 703
            AC  D+E+DM+RE F+ NF Y SP   ++   EEKV   A  MN++ ++  +  KI LR
Sbjct: 255 MACQADAEIDMTREPFELNFDYGSPATCEE--EEEKVAVGAMDMNNKVDDPKKKNKILLR 312

Query: 704 LNYEGVILAWDNHGCPWKTGTRPEFNPHDWCLDFME----KLSGPAEDEHRHGSTIMGFS 871
           L+YE +I AW + G PW  G RPE +P D   D +     ++  P  +    G       
Sbjct: 313 LDYEAIITAWASQGSPWTNGHRPELDPDDCWPDCLGTCGIQVHHPYGEFGGMGEQQAAMG 372

Query: 872 DGAREARVSR 901
           DG REARVSR
Sbjct: 373 DGGREARVSR 382


>ref|XP_002315940.1| predicted protein [Populus trichocarpa] gi|222864980|gb|EEF02111.1|
            predicted protein [Populus trichocarpa]
          Length = 447

 Score =  179 bits (455), Expect = 6e-43
 Identities = 129/330 (39%), Positives = 180/330 (54%), Gaps = 37/330 (11%)
 Frame = +2

Query: 23   NLAPAWQCGFARKARTPRHPKPVHKDK--QRSRNV-LSLVPEMGN-ECHMFEETEAHLYY 190
            N  P+W  GF RKARTPRH KPV + K  + +RN+ + LVPE+G+ E  + +  E HL Y
Sbjct: 76   NSMPSWHGGFTRKARTPRHGKPVSRSKIEETTRNIPIPLVPEVGSDEISLEDNEEEHLLY 135

Query: 191  RVPIFDPFAAEVCNA---SNET--------ENTMKVSKDTSLSHQKESDKGCDMNTLPEV 337
            RVPIFDPFAAE+C +   SNE          +T + + D+S +  K    G +   +  +
Sbjct: 136  RVPIFDPFAAELCTSTTVSNEAGAVVPAGGTDTDQRAADSSGTESKVLLGGSEGKDVESL 195

Query: 338  H--LPSDIELAEFAVDVETLLGMGF-NEESSQVGLELIDCKEESELG-NSYQ--ENRVKV 499
            H  LPSD++LAEFA D+E+LLG G  NE      L L+DCKEE+ELG   Y     +VKV
Sbjct: 196  HGFLPSDMDLAEFAADMESLLGRGLENESFGMEELGLMDCKEENELGVKGYPLGNGKVKV 255

Query: 500  EDEE----VQAAITACGFDSEVDMSRE-SFDWNFSYESP--LVEDD---GSAEEKVMALA 649
            E+EE     + A+  C  D E+D++++  F+ +F Y+SP   VE+D   G  E  +    
Sbjct: 256  EEEEDAGMEEKAVRECHADIEIDIAKDPPFELSFDYDSPATCVEEDEKVGIEEGDLKNSD 315

Query: 650  ETMNDESEESIQNMKILRLNYEGVILAWDNHGCPWKTGTRPEFN-----PHDWCLDFM-E 811
                D+     +   +L L+YE V+ AW + G PW  G RP+F+     P   C+     
Sbjct: 316  GEYEDDGGAKKKRRTLLSLDYEAVMTAWASQGSPWTNGYRPDFDADECWPDADCMGICGA 375

Query: 812  KLSGPAEDEHRHGSTIMGFSDGAREARVSR 901
            +L  P  D    G+      DG REARVSR
Sbjct: 376  QLHHPYGDVSGLGAHPAALVDGGREARVSR 405


>ref|XP_002276181.1| PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Vitis vinifera]
          Length = 410

 Score =  172 bits (436), Expect = 1e-40
 Identities = 112/302 (37%), Positives = 165/302 (54%), Gaps = 9/302 (2%)
 Frame = +2

Query: 23  NLAPAWQCGFARKARTPRHPKPVHKDKQRSRNVLS----LVPEMGNECHMFEETEAHLYY 190
           N  PAW  GF RKAR+PR+ K       +  N       LVPE+G+E    +E E    +
Sbjct: 75  NSTPAWHQGFTRKARSPRNVKRTSVQPSKHENKFPTPPPLVPEIGSEEASPDENEEQFLF 134

Query: 191 RVPIFDPFAAEVCNASNETENTMKVSKDTSLSHQKESDKGCDMNTLPEVHLPSDIELAEF 370
           RVP FDPF AE+   +N+    + +  D+        ++  D+++L    LPS+++LAEF
Sbjct: 135 RVPTFDPFVAEL---NNDGIREIGMENDSKPLSDYGHEEIGDLDSLTGF-LPSEMDLAEF 190

Query: 371 AVDVETLLGMGFNEESSQV-GLELIDCKEESELGNSYQENRVKVEDEEVQAAITACGFDS 547
           A DVE+ LG G +E+S  + G+ ++DC E+ ++   + + +VKV++E V+   T    D 
Sbjct: 191 AADVESYLGAGLDEDSCGIKGIGVLDC-EQGDMDACFGDQKVKVKEERVETDATF-HLDP 248

Query: 548 EVDMSRESFDWNFSYESPLVEDDGSAEEKVMALAETMNDESEESIQNMKILRLNYEGVIL 727
           E+DM++E   WN  YES +++++   EEK++A  E     S         L LNYE VI 
Sbjct: 249 ELDMTKELLAWNLDYESTVMDEE-EHEEKMVAAVEMRRKIS---------LSLNYEDVIT 298

Query: 728 AWDNHGCPWKTGTRPEFNPHDWCLDFM----EKLSGPAEDEHRHGSTIMGFSDGAREARV 895
           AW + G PW TG RPEF+P+D+  D+M      + GP  D    G    G  DG REARV
Sbjct: 299 AWASQGSPWTTGNRPEFDPNDYWPDYMGACPTNVHGPCGDVGGVGGN-FGGRDGGREARV 357

Query: 896 SR 901
            R
Sbjct: 358 LR 359


>emb|CAN73757.1| hypothetical protein VITISV_026326 [Vitis vinifera]
          Length = 475

 Score =  172 bits (436), Expect = 1e-40
 Identities = 112/302 (37%), Positives = 165/302 (54%), Gaps = 9/302 (2%)
 Frame = +2

Query: 23  NLAPAWQCGFARKARTPRHPKPVHKDKQRSRNVLS----LVPEMGNECHMFEETEAHLYY 190
           N  PAW  GF RKAR+PR+ K       +  N       LVPE+G+E    +E E    +
Sbjct: 140 NSTPAWHQGFTRKARSPRNVKRTSVQPSKHENKFPTPPPLVPEIGSEEASPDENEEQFLF 199

Query: 191 RVPIFDPFAAEVCNASNETENTMKVSKDTSLSHQKESDKGCDMNTLPEVHLPSDIELAEF 370
           RVP FDPF AE+   +N+    + +  D+        ++  D+++L    LPS+++LAEF
Sbjct: 200 RVPTFDPFVAEL---NNDGIREIGMENDSKPLSDYGHEEIGDLDSLTGF-LPSEMDLAEF 255

Query: 371 AVDVETLLGMGFNEESSQV-GLELIDCKEESELGNSYQENRVKVEDEEVQAAITACGFDS 547
           A DVE+ LG G +E+S  + G+ ++DC E+ ++   + + +VKV++E V+   T    D 
Sbjct: 256 AADVESYLGAGLDEDSCGIKGIGVLDC-EQGDMDACFGDQKVKVKEERVETDATF-HLDP 313

Query: 548 EVDMSRESFDWNFSYESPLVEDDGSAEEKVMALAETMNDESEESIQNMKILRLNYEGVIL 727
           E+DM++E   WN  YES +++++   EEK++A  E     S         L LNYE VI 
Sbjct: 314 ELDMTKELLAWNLDYESTVMDEE-EHEEKMVAAVEMRRKIS---------LSLNYEDVIT 363

Query: 728 AWDNHGCPWKTGTRPEFNPHDWCLDFM----EKLSGPAEDEHRHGSTIMGFSDGAREARV 895
           AW + G PW TG RPEF+P+D+  D+M      + GP  D    G    G  DG REARV
Sbjct: 364 AWASQGSPWTTGNRPEFDPNDYWPDYMGACPTNVHGPCGDVGGVGGN-FGGRDGGREARV 422

Query: 896 SR 901
            R
Sbjct: 423 LR 424


>gb|ABK95116.1| unknown [Populus trichocarpa]
          Length = 444

 Score =  171 bits (433), Expect = 2e-40
 Identities = 124/330 (37%), Positives = 169/330 (51%), Gaps = 37/330 (11%)
 Frame = +2

Query: 23   NLAPAWQCGFARKARTPRHPKPVHKDK--QRSRNV-LSLVPEMGNECHMFEETEA-HLYY 190
            N  P+W  GF RKARTPRH KPV + K  +  RN+ + LVPE+G++    E+ E  HL Y
Sbjct: 76   NSVPSWHGGFTRKARTPRHGKPVSQSKIAETIRNIPIPLVPEVGSDEISHEDNEEEHLLY 135

Query: 191  RVPIFDPFAAEVCNA---SNETENTMKVSKDTSLSHQKESDKGC------------DMNT 325
            RVPIFDPF A++C +   SNE    +    +     +     G             D+ +
Sbjct: 136  RVPIFDPFVADLCASTTISNEAGAIVPAGGNDGTDQRVADSNGVESKILIGAIERRDVES 195

Query: 326  LPEVHLPSDIELAEFAVDVETLLGMGFNEES-SQVGLELIDCKEESEL---GNSYQENRV 493
            LP   LPSD++LAEFA D+E+LLG G   ES     L L+DCKEE E    G      +V
Sbjct: 196  LPGF-LPSDMDLAEFAADMESLLGRGLENESFGMEELGLMDCKEEKEFEVKGFPLWNGKV 254

Query: 494  KVEDEE----VQAAITACGFDSEVDMSRES-FDWNFSYESPLV--EDDGSAEEKVMALAE 652
            KVEDEE     + A+  C    E DM+++  F+ +F Y S     E+D     +   L  
Sbjct: 255  KVEDEENASVERKAVRKCYAGIETDMAKDPIFELSFDYNSSATCGEEDEKVGIEEGDLKN 314

Query: 653  TMND-ESEESIQNMKILRLNYEGVILAWDNHGCPWKTGTRPEFNPHDWCLDFMEKLSGPA 829
            T  + E ++  +   +L L+YE V+ AW + G PW  G RP+F+P +   D M      A
Sbjct: 315  TRGEYEDDDGAKRKILLSLDYEAVMTAWASQGSPWTNGNRPDFDPDECWPDCMGICG--A 372

Query: 830  EDEHRHGSTIMGFS------DGAREARVSR 901
            +  H +G  I G        DG REARVSR
Sbjct: 373  QLHHPYGDMISGLGAHPAMVDGGREARVSR 402


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