BLASTX nr result

ID: Bupleurum21_contig00005136 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005136
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABY47652.1| one-helix protein [Ipomoea nil]                        177   5e-42
gb|AFK42419.1| unknown [Medicago truncatula]                          174   2e-41
ref|XP_003634524.1| PREDICTED: uncharacterized protein LOC100854...   174   3e-41
ref|XP_003592060.1| One-helix protein [Medicago truncatula] gi|3...   171   2e-40
gb|ACV60362.1| putative one-helix protein [Camellia sinensis]         170   4e-40

>gb|ABY47652.1| one-helix protein [Ipomoea nil]
          Length = 165

 Score =  177 bits (448), Expect = 5e-42
 Identities = 98/169 (57%), Positives = 109/169 (64%)
 Frame = +1

Query: 160 MSAATAAFPCIKITKXXXXXXXXXXXXLFRFSATKASIITIRSSQADGPLRRXXXXXXXX 339
           M   ++ F  IKI K              RFSAT+  I T+RSSQA+GP RR        
Sbjct: 1   MPVTSSPFSYIKIPKPPSPSSCTS----MRFSATRPIIFTVRSSQAEGPFRRPVAPSPPT 56

Query: 340 XXXXXXXXXXXXXXXXXXXXXXESEKKSVVTLEFQRQKAKELQDYFKKKKLEEANQGPFF 519
                                   E KSVVTLEFQRQKAKELQ+YFK+KK EEANQGPFF
Sbjct: 57  PVKPVPPSPPPSSPPKPAAVAAAVEDKSVVTLEFQRQKAKELQEYFKQKKAEEANQGPFF 116

Query: 520 GFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVEQVKILLSNFGIVDLD 666
           GFI KNEISNGRWAMFGFAVGMLTEYATGSDFV+Q+KILLSNFGI+DL+
Sbjct: 117 GFIGKNEISNGRWAMFGFAVGMLTEYATGSDFVDQLKILLSNFGILDLE 165


>gb|AFK42419.1| unknown [Medicago truncatula]
          Length = 175

 Score =  174 bits (442), Expect = 2e-41
 Identities = 99/174 (56%), Positives = 116/174 (66%), Gaps = 7/174 (4%)
 Frame = +1

Query: 166 AATAAFPCIKI-TKXXXXXXXXXXXXLFRFSATKASIITIRSSQADGPLRRXXXXXXXXX 342
           + T++ PCIKI T              FRFS++K   +TIR++Q DGPLRR         
Sbjct: 2   SVTSSIPCIKIPTTHSSSSSCSTSSYSFRFSSSKLYAVTIRNAQNDGPLRRPAAPSVKEP 61

Query: 343 XXXXXXXXXXXXXXXXXXXXXES-----EKKSVVTLEFQRQKAKELQDYFKKKKLEEA-N 504
                                ++     + KSVV+LEFQRQKAKELQ+YFKKKKLE+A N
Sbjct: 62  SNLPQPLKPSPPSQPPPPQPQKTSSFVGDDKSVVSLEFQRQKAKELQEYFKKKKLEQAAN 121

Query: 505 QGPFFGFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVEQVKILLSNFGIVDLD 666
           QGPFFGFIAKNEISNGRWAMFGFAVG+LTE+ATGSDFV+QVKILLSNFGIVDLD
Sbjct: 122 QGPFFGFIAKNEISNGRWAMFGFAVGLLTEFATGSDFVDQVKILLSNFGIVDLD 175


>ref|XP_003634524.1| PREDICTED: uncharacterized protein LOC100854878 [Vitis vinifera]
          Length = 175

 Score =  174 bits (441), Expect = 3e-41
 Identities = 99/175 (56%), Positives = 110/175 (62%), Gaps = 8/175 (4%)
 Frame = +1

Query: 166 AATAAFPCIKITKXXXXXXXXXXXXLFRFSATKASIITIRSSQADGPLRRXXXXXXXXXX 345
           +  ++ PCIKI                RFSATK +I TIRSSQ +GPLRR          
Sbjct: 2   SVASSIPCIKIPTSSSSSSSSSSSYC-RFSATKPAIFTIRSSQTEGPLRRPVAPLREPAP 60

Query: 346 XXXXXXXXXXXXXXXXXXXXESEK--------KSVVTLEFQRQKAKELQDYFKKKKLEEA 501
                                S          K+VVTLEFQRQ AKELQDYFK++KLEEA
Sbjct: 61  PPLPPKPIPPSPSPSSASPPPSPPPPPSASVDKNVVTLEFQRQVAKELQDYFKQRKLEEA 120

Query: 502 NQGPFFGFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVEQVKILLSNFGIVDLD 666
           NQGPFFGFI KNEISNGRWAMFGFAVGMLTEYATGSDFV+QVKILLSNFGI+DL+
Sbjct: 121 NQGPFFGFIGKNEISNGRWAMFGFAVGMLTEYATGSDFVDQVKILLSNFGIIDLE 175


>ref|XP_003592060.1| One-helix protein [Medicago truncatula] gi|355481108|gb|AES62311.1|
           One-helix protein [Medicago truncatula]
           gi|388511839|gb|AFK43981.1| unknown [Medicago
           truncatula]
          Length = 175

 Score =  171 bits (434), Expect = 2e-40
 Identities = 98/174 (56%), Positives = 115/174 (66%), Gaps = 7/174 (4%)
 Frame = +1

Query: 166 AATAAFPCIKI-TKXXXXXXXXXXXXLFRFSATKASIITIRSSQADGPLRRXXXXXXXXX 342
           + T++ PCIKI T              FRFS++K   +TIR+ Q DGPLRR         
Sbjct: 2   SVTSSIPCIKIPTTHSSSSSCSTSSYSFRFSSSKLYAVTIRNVQNDGPLRRPAAPSVKEP 61

Query: 343 XXXXXXXXXXXXXXXXXXXXXES-----EKKSVVTLEFQRQKAKELQDYFKKKKLEEA-N 504
                                ++     + KSVV+LEFQRQKAKELQ+YFKKKKLE+A +
Sbjct: 62  SNLPQPLKPSPPSQPPPPQPQKTSSFVGDDKSVVSLEFQRQKAKELQEYFKKKKLEQAAD 121

Query: 505 QGPFFGFIAKNEISNGRWAMFGFAVGMLTEYATGSDFVEQVKILLSNFGIVDLD 666
           QGPFFGFIAKNEISNGRWAMFGFAVG+LTE+ATGSDFV+QVKILLSNFGIVDLD
Sbjct: 122 QGPFFGFIAKNEISNGRWAMFGFAVGLLTEFATGSDFVDQVKILLSNFGIVDLD 175


>gb|ACV60362.1| putative one-helix protein [Camellia sinensis]
          Length = 174

 Score =  170 bits (431), Expect = 4e-40
 Identities = 95/143 (66%), Positives = 102/143 (71%), Gaps = 2/143 (1%)
 Frame = +1

Query: 244 FRFSATKASIITIRSSQADGPLRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE--SEK 417
           FRF   K SI TIR SQ+DGPLRR                                  E 
Sbjct: 35  FRF---KPSIPTIRCSQSDGPLRRPLAPTPPTTLKPVPPSRPPPPQPQSPAKPAAVVEEG 91

Query: 418 KSVVTLEFQRQKAKELQDYFKKKKLEEANQGPFFGFIAKNEISNGRWAMFGFAVGMLTEY 597
           KSV+TLEFQRQKAKELQDYFK+KKL+EA+QGPFFGFIAKNEISNGRWAMFGFAVGMLTEY
Sbjct: 92  KSVITLEFQRQKAKELQDYFKQKKLDEADQGPFFGFIAKNEISNGRWAMFGFAVGMLTEY 151

Query: 598 ATGSDFVEQVKILLSNFGIVDLD 666
           ATGSDFV+QVKILLSNFGIVDL+
Sbjct: 152 ATGSDFVDQVKILLSNFGIVDLE 174


Top