BLASTX nr result
ID: Bupleurum21_contig00005103
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00005103
(1300 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana... 325 1e-86
ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cuc... 303 8e-80
ref|XP_002301165.1| f-box family protein [Populus trichocarpa] g... 301 2e-79
ref|XP_002283593.1| PREDICTED: F-box protein At1g47056 isoform 2... 300 7e-79
emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera] 299 1e-78
>gb|AAP03878.1| Avr9/Cf-9 rapidly elicited protein 189 [Nicotiana tabacum]
Length = 550
Score = 325 bits (834), Expect = 1e-86
Identities = 167/308 (54%), Positives = 221/308 (71%), Gaps = 1/308 (0%)
Frame = -3
Query: 1154 DHISRLSDECLGIIFQLLNYGDRKSCSLVCRRWCLVEGESRKSLYIEAKASLISYLPALF 975
D+ L DECL +IFQ L+ GDRK CSLV RRW LVEG+SR L + AKA + ++P +F
Sbjct: 58 DYTYELPDECLALIFQCLSSGDRKKCSLVWRRWLLVEGQSRHRLSLNAKAEFLPHIPTIF 117
Query: 974 SRFTSVTKLVLRCFWRRESMNDEALKMISIDCCNLTTLKLRGCRNVTDVGMAALGMHAKR 795
SRF S TKL LRC + S+NDEAL +IS+ C NLT LKLRGCR+VTDVGM+A + K
Sbjct: 118 SRFDSGTKLALRCDRKSVSINDEALTLISLRCVNLTRLKLRGCRDVTDVGMSAFAKNCKS 177
Query: 794 LIKFSCRTCMFGTKGINALLNHSSSIEELSVKDLRR-TEKSGIEMLYPGVAASSLKSICL 618
L KFSC +CMFG KG+NALL+H S++EELSVK LR + + + PG AASSLKSICL
Sbjct: 178 LKKFSCGSCMFGAKGMNALLDHCSTLEELSVKRLRGINDGFAADPIGPGAAASSLKSICL 237
Query: 617 KDIYDFEFLATQLITGSKNLRSLTLLRCLGGADWDNVLTTIANEENSLSEVYLDKVKVGD 438
K++Y+ + LI GSKNLR+L LLRCLG DWD + TI + EN ++E++L++++V D
Sbjct: 238 KELYNGQCF-EPLIIGSKNLRTLKLLRCLG--DWDRLFETIGSRENHVAEIHLERLQVSD 294
Query: 437 AGITALSKCSKLEILRVTRILNCKNSSILSVVKQCKLLRKLHIDGWRTKRILGEEGLYTI 258
G+ A+S C LEIL + + C ++ +++V ++CKLLRKLHIDGWRT RI G+EGL I
Sbjct: 295 TGLNAISNCPNLEILHLVKTPECTDAGVVAVARKCKLLRKLHIDGWRTNRI-GDEGLVAI 353
Query: 257 RNHNAKLQ 234
++ L+
Sbjct: 354 AENSLNLK 361
>ref|XP_004141272.1| PREDICTED: F-box protein At1g47056-like [Cucumis sativus]
gi|449515093|ref|XP_004164584.1| PREDICTED: F-box protein
At1g47056-like [Cucumis sativus]
Length = 535
Score = 303 bits (775), Expect = 8e-80
Identities = 164/336 (48%), Positives = 225/336 (66%)
Frame = -3
Query: 1241 SSTPSVQMSPPINLYATPMKRIVLSIAAGDHISRLSDECLGIIFQLLNYGDRKSCSLVCR 1062
S S + P++L T + ++ A D IS L DECL IFQ L+ DRK CSLVCR
Sbjct: 22 SKIKSTALISPMHLDETDDVQEIIH-GASDFISDLPDECLACIFQSLSSVDRKGCSLVCR 80
Query: 1061 RWCLVEGESRKSLYIEAKASLISYLPALFSRFTSVTKLVLRCFWRRESMNDEALKMISID 882
RW VEG+SR L ++A+A L S +P+LF+RF +VTKL L+C R S+ D++L +IS+
Sbjct: 81 RWFKVEGQSRHRLSLKAEADLSSMIPSLFTRFDAVTKLALKCDRRSTSIRDDSLILISLR 140
Query: 881 CCNLTTLKLRGCRNVTDVGMAALGMHAKRLIKFSCRTCMFGTKGINALLNHSSSIEELSV 702
C NLT LKLR CR +TDVGMAA + K L K SC +C FG KG+NA+L++ S++EELSV
Sbjct: 141 CRNLTRLKLRACRELTDVGMAAFAKNCKGLKKLSCGSCTFGAKGMNAVLDNCSALEELSV 200
Query: 701 KDLRRTEKSGIEMLYPGVAASSLKSICLKDIYDFEFLATQLITGSKNLRSLTLLRCLGGA 522
K LR S E + PG+A SSLK+ICLKD+Y+ + LI G+K+LR+L L RC G
Sbjct: 201 KRLRGITDSTAEPIGPGIAGSSLKTICLKDLYNAQCFGPLLI-GAKSLRTLKLFRCSG-- 257
Query: 521 DWDNVLTTIANEENSLSEVYLDKVKVGDAGITALSKCSKLEILRVTRILNCKNSSILSVV 342
DWD +L IA+ L EV+L++++V D G++A+S C LEIL + + C N I+++
Sbjct: 258 DWDALLRVIADRVTGLVEVHLERLQVSDVGLSAISNCLDLEILHLVKTPECTNLGIVALA 317
Query: 341 KQCKLLRKLHIDGWRTKRILGEEGLYTIRNHNAKLQ 234
++CKLLRKLHIDGW+ RI G+EGL + + + LQ
Sbjct: 318 ERCKLLRKLHIDGWKANRI-GDEGLVAVARNCSNLQ 352
>ref|XP_002301165.1| f-box family protein [Populus trichocarpa]
gi|222842891|gb|EEE80438.1| f-box family protein [Populus
trichocarpa]
Length = 533
Score = 301 bits (772), Expect = 2e-79
Identities = 155/312 (49%), Positives = 217/312 (69%), Gaps = 1/312 (0%)
Frame = -3
Query: 1166 IAAGDHISRLSDECLGIIFQLLNYGDRKSCSLVCRRWCLVEGESRKSLYIEAKASLISYL 987
+ A D+IS L DECL IFQ L+ GDRKSCSLVCRRW +EG+SR L + A++ L+ ++
Sbjct: 45 VEAPDYISDLPDECLACIFQSLSSGDRKSCSLVCRRWLRIEGQSRHRLSLNAQSDLLPFV 104
Query: 986 PALFSRFTSVTKLVLRCFWRRESMNDEALKMISIDCCNLTTLKLRGCRNVTDVGMAALGM 807
+LFSRF +VTKL L+C R S+ DEAL ISI C NLT LKLR CR +TD GMAA
Sbjct: 105 TSLFSRFDAVTKLALKCDRRSVSIGDEALVAISIRCRNLTRLKLRACREITDAGMAAFAK 164
Query: 806 HAKRLIKFSCRTCMFGTKGINALLNHSSSIEELSVKDLRR-TEKSGIEMLYPGVAASSLK 630
+ K L KFSC +C FG KG+NA+L++ +S+E+LSVK LR T+ + E + PG+AA+SLK
Sbjct: 165 NCKALKKFSCGSCAFGAKGMNAMLDNCASLEDLSVKRLRGITDGATAEPIGPGLAAASLK 224
Query: 629 SICLKDIYDFEFLATQLITGSKNLRSLTLLRCLGGADWDNVLTTIANEENSLSEVYLDKV 450
+ICLK++Y+ + LI GSKNL++L L RC G DWD +L IA+ + E++L+++
Sbjct: 225 TICLKELYNGQCFG-PLIIGSKNLKTLKLFRCSG--DWDKLLQVIADRVTGMVEIHLERL 281
Query: 449 KVGDAGITALSKCSKLEILRVTRILNCKNSSILSVVKQCKLLRKLHIDGWRTKRILGEEG 270
+V D G+ A+S C LEIL + + C + ++S+ ++C+LLRKLHIDGW+ RI G++G
Sbjct: 282 QVSDTGLVAISNCLNLEILHLVKTPECTDIGLVSIAERCRLLRKLHIDGWKAHRI-GDDG 340
Query: 269 LYTIRNHNAKLQ 234
L + + LQ
Sbjct: 341 LMAVAKYCLNLQ 352
>ref|XP_002283593.1| PREDICTED: F-box protein At1g47056 isoform 2 [Vitis vinifera]
Length = 515
Score = 300 bits (767), Expect = 7e-79
Identities = 160/308 (51%), Positives = 211/308 (68%), Gaps = 1/308 (0%)
Frame = -3
Query: 1154 DHISRLSDECLGIIFQLLNYGDRKSCSLVCRRWCLVEGESRKSLYIEAKASLISYLPALF 975
D+ S L D+ L IFQ L+ GDRK CSLVC+RW LVEG SR L + A++ +I +P +F
Sbjct: 77 DYTSDLPDDILACIFQFLSTGDRKRCSLVCQRWLLVEGRSRHRLSLNAQSEIIPLIPCIF 136
Query: 974 SRFTSVTKLVLRCFWRRESMNDEALKMISIDCCNLTTLKLRGCRNVTDVGMAALGMHAKR 795
RF SV+KL L+C R S++D+AL +IS NLT LKLRGCR +TDVGMAAL + K
Sbjct: 137 FRFDSVSKLTLKCDRRSISISDDALILISNLSKNLTRLKLRGCRELTDVGMAALAKNCKG 196
Query: 794 LIKFSCRTCMFGTKGINALLNHSSSIEELSVKDLRRTEKSGI-EMLYPGVAASSLKSICL 618
L K SC +C FGTKGINA+L+H S++EELSVK LR G+ E + PGVAASSLKS+CL
Sbjct: 197 LKKLSCGSCTFGTKGINAVLDHCSALEELSVKRLRGMNDRGVAEPIGPGVAASSLKSLCL 256
Query: 617 KDIYDFEFLATQLITGSKNLRSLTLLRCLGGADWDNVLTTIANEENSLSEVYLDKVKVGD 438
K++Y+ + +L+ SK LR+L L C G DWD L T+ + ++L E++L++++V D
Sbjct: 257 KELYNGQCF-ERLVVASKKLRTLKLFGCFG--DWDRFLETVTDGNSNLVEIHLERLQVTD 313
Query: 437 AGITALSKCSKLEILRVTRILNCKNSSILSVVKQCKLLRKLHIDGWRTKRILGEEGLYTI 258
G++A+SKC LEIL + R C N ++SV CKLLRKLHIDGWRT RI G+EGL +
Sbjct: 314 MGLSAISKCLNLEILHILRTPECTNLGLVSVAGNCKLLRKLHIDGWRTNRI-GDEGLIAV 372
Query: 257 RNHNAKLQ 234
LQ
Sbjct: 373 AKQCTNLQ 380
>emb|CAN59800.1| hypothetical protein VITISV_038872 [Vitis vinifera]
Length = 1151
Score = 299 bits (765), Expect = 1e-78
Identities = 160/308 (51%), Positives = 211/308 (68%), Gaps = 1/308 (0%)
Frame = -3
Query: 1154 DHISRLSDECLGIIFQLLNYGDRKSCSLVCRRWCLVEGESRKSLYIEAKASLISYLPALF 975
D+ S L D+ L IFQ L+ GDRK CSLVC+RW LVEG SR L + A++ +I +P +F
Sbjct: 77 DYTSDLPDDILACIFQFLSTGDRKRCSLVCQRWLLVEGRSRHRLSLNAQSEIIPLIPXIF 136
Query: 974 SRFTSVTKLVLRCFWRRESMNDEALKMISIDCCNLTTLKLRGCRNVTDVGMAALGMHAKR 795
RF SV+KL L+C R S++D+AL +IS NLT LKLRGCR +TDVGMAAL + K
Sbjct: 137 FRFDSVSKLXLKCDRRSISISDDALILISNLSKNLTRLKLRGCRELTDVGMAALAKNCKG 196
Query: 794 LIKFSCRTCMFGTKGINALLNHSSSIEELSVKDLRRTEKSGI-EMLYPGVAASSLKSICL 618
L K SC +C FGTKGINA+L+H S++EELSVK LR G+ E + PGVAASSLKS+CL
Sbjct: 197 LKKLSCGSCTFGTKGINAVLDHCSALEELSVKRLRGMNDRGVAEPIGPGVAASSLKSLCL 256
Query: 617 KDIYDFEFLATQLITGSKNLRSLTLLRCLGGADWDNVLTTIANEENSLSEVYLDKVKVGD 438
K++Y+ + +L+ SK LR+L L C G DWD L T+ + ++L E++L++++V D
Sbjct: 257 KELYNGQCF-ERLVVASKKLRTLKLFGCFG--DWDRFLETVTDGNSNLVEIHLERLQVTD 313
Query: 437 AGITALSKCSKLEILRVTRILNCKNSSILSVVKQCKLLRKLHIDGWRTKRILGEEGLYTI 258
G++A+SKC LEIL + R C N ++SV CKLLRKLHIDGWRT RI G+EGL +
Sbjct: 314 MGLSAISKCLNLEILHILRTPECTNLGLVSVAGNCKLLRKLHIDGWRTNRI-GDEGLIAV 372
Query: 257 RNHNAKLQ 234
LQ
Sbjct: 373 AKQCTNLQ 380