BLASTX nr result

ID: Bupleurum21_contig00005093 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005093
         (1147 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM47465.1| AT5g09730/F17I14_80 [Arabidopsis thaliana]             509   e-142
ref|NP_178068.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Arab...   508   e-142
dbj|BAB41014.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Arabi...   506   e-141
ref|XP_002887789.1| predicted protein [Arabidopsis lyrata subsp....   506   e-141
ref|XP_003624281.1| 2-dehydro-3-deoxyphosphooctonate aldolase [M...   503   e-140

>gb|AAM47465.1| AT5g09730/F17I14_80 [Arabidopsis thaliana]
          Length = 290

 Score =  509 bits (1310), Expect = e-142
 Identities = 246/290 (84%), Positives = 275/290 (94%)
 Frame = -1

Query: 1090 MDSSSVLYNQLKSAEPFFVLAGPNVIESEEHVLRMAQHIKAITSKLGLPLIFKSSFDKAN 911
            M ++S+LYNQLK+AEPFF+LAGPNVIESEEH+LRMA+HIK I++K+GLPL+FKSSFDKAN
Sbjct: 1    MTATSLLYNQLKAAEPFFLLAGPNVIESEEHILRMAKHIKDISTKVGLPLVFKSSFDKAN 60

Query: 910  RTSSKSFRGPGLAEGLKILEKVKVAYDLPIVTDVHETNQLDAVGRVADIIQIPAFLCRQT 731
            RTSSKSFRGPG+AEGLKILEKVKVAYDLPIVTDVHE++Q +AVG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 120

Query: 730  DLLVAAAQTGRIINIKKGQFCAPSVMTHSAEKIRLAGNQNVMLCERGTMFGYNDLIVDPR 551
            DLLVAAAQTG+IINIKKGQFCAPSVM +SAEKIRLAGN NVM+CERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQFCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 550  NLEWMREANCPIVADVTHSLQQPAGKKLEGGGIASGGLRELIPCIARTAVAVGVDGLFME 371
            N EWMREANCP+VAD+THSLQQPAGKKL+GGG+ASGGLRELIPCIARTAVAVGVDG+FME
Sbjct: 181  NFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 370  VHDDPLNAPVDGPTQWPLRHXXXXXXXXVAIARVTKGKQQFKIDLTPFRD 221
            VHDDPL+APVDGPTQWPLRH        +AIARVTKGKQ+ +IDLTP+RD
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPYRD 290


>ref|NP_178068.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]
            gi|30699423|ref|NP_849906.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|42572171|ref|NP_974176.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|79321478|ref|NP_001031300.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|20532134|sp|Q9AV97.2|KDSA_ARATH RecName:
            Full=2-dehydro-3-deoxyphosphooctonate aldolase; AltName:
            Full=3-deoxy-D-manno-octulosonic acid 8-phosphate
            synthase; AltName: Full=KDO-8-phosphate synthase;
            Short=AtkdsA; Short=KDO 8-P synthase; Short=KDOPS;
            AltName: Full=Phospho-2-dehydro-3-deoxyoctonate aldolase
            gi|4835760|gb|AAD30227.1|AC007202_9 Strong similarity to
            gb|Y14272 3-deoxy-D-manno-2-octulosonate-8-phosphate
            synthase from Pisum sativum. ESTs gb|AA067485 and
            gb|AI100551 come from this gene [Arabidopsis thaliana]
            gi|13937187|gb|AAK50087.1|AF372947_1 At1g79500/T8K14_8
            [Arabidopsis thaliana] gi|222423484|dbj|BAH19712.1|
            AT1G79500 [Arabidopsis thaliana]
            gi|332198130|gb|AEE36251.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|332198131|gb|AEE36252.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|332198132|gb|AEE36253.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana] gi|332198133|gb|AEE36254.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis
            thaliana]
          Length = 290

 Score =  508 bits (1309), Expect = e-142
 Identities = 246/290 (84%), Positives = 275/290 (94%)
 Frame = -1

Query: 1090 MDSSSVLYNQLKSAEPFFVLAGPNVIESEEHVLRMAQHIKAITSKLGLPLIFKSSFDKAN 911
            M ++S+LYNQLK+AEPFF+LAGPNVIESEEH+LRMA+HIK I++K+GLPL+FKSSFDKAN
Sbjct: 1    MAATSLLYNQLKAAEPFFLLAGPNVIESEEHILRMAKHIKDISTKVGLPLVFKSSFDKAN 60

Query: 910  RTSSKSFRGPGLAEGLKILEKVKVAYDLPIVTDVHETNQLDAVGRVADIIQIPAFLCRQT 731
            RTSSKSFRGPG+AEGLKILEKVKVAYDLPIVTDVHE++Q +AVG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 120

Query: 730  DLLVAAAQTGRIINIKKGQFCAPSVMTHSAEKIRLAGNQNVMLCERGTMFGYNDLIVDPR 551
            DLLVAAAQTG+IINIKKGQFCAPSVM +SAEKIRLAGN NVM+CERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQFCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 550  NLEWMREANCPIVADVTHSLQQPAGKKLEGGGIASGGLRELIPCIARTAVAVGVDGLFME 371
            N EWMREANCP+VAD+THSLQQPAGKKL+GGG+ASGGLRELIPCIARTAVAVGVDG+FME
Sbjct: 181  NFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 370  VHDDPLNAPVDGPTQWPLRHXXXXXXXXVAIARVTKGKQQFKIDLTPFRD 221
            VHDDPL+APVDGPTQWPLRH        +AIARVTKGKQ+ +IDLTP+RD
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPYRD 290


>dbj|BAB41014.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Arabidopsis thaliana]
          Length = 290

 Score =  506 bits (1303), Expect = e-141
 Identities = 245/290 (84%), Positives = 274/290 (94%)
 Frame = -1

Query: 1090 MDSSSVLYNQLKSAEPFFVLAGPNVIESEEHVLRMAQHIKAITSKLGLPLIFKSSFDKAN 911
            M ++S+LYNQLK+AEPFF+LAGPNVIESEEH+LRMA+HIK I++K+GLPL+FKSSFDKAN
Sbjct: 1    MAATSLLYNQLKAAEPFFLLAGPNVIESEEHILRMAKHIKDISTKVGLPLVFKSSFDKAN 60

Query: 910  RTSSKSFRGPGLAEGLKILEKVKVAYDLPIVTDVHETNQLDAVGRVADIIQIPAFLCRQT 731
            RTSSKSFRGPG+AEGLKILEKVKVAYDLPIVTDVHE++Q +AVG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 120

Query: 730  DLLVAAAQTGRIINIKKGQFCAPSVMTHSAEKIRLAGNQNVMLCERGTMFGYNDLIVDPR 551
            DLLVAAAQTG+IINIKKGQ CAPSVM +SAEKIRLAGN NVM+CERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQLCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 550  NLEWMREANCPIVADVTHSLQQPAGKKLEGGGIASGGLRELIPCIARTAVAVGVDGLFME 371
            N EWMREANCP+VAD+THSLQQPAGKKL+GGG+ASGGLRELIPCIARTAVAVGVDG+FME
Sbjct: 181  NFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 370  VHDDPLNAPVDGPTQWPLRHXXXXXXXXVAIARVTKGKQQFKIDLTPFRD 221
            VHDDPL+APVDGPTQWPLRH        +AIARVTKGKQ+ +IDLTP+RD
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPYRD 290


>ref|XP_002887789.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297333630|gb|EFH64048.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 290

 Score =  506 bits (1302), Expect = e-141
 Identities = 246/290 (84%), Positives = 273/290 (94%)
 Frame = -1

Query: 1090 MDSSSVLYNQLKSAEPFFVLAGPNVIESEEHVLRMAQHIKAITSKLGLPLIFKSSFDKAN 911
            M ++S LYNQLK+AEPFF+LAGPNVIESEEH+LRMA+HIK I++K+GLPLIFKSSFDKAN
Sbjct: 1    MAATSPLYNQLKAAEPFFLLAGPNVIESEEHILRMAKHIKDISTKVGLPLIFKSSFDKAN 60

Query: 910  RTSSKSFRGPGLAEGLKILEKVKVAYDLPIVTDVHETNQLDAVGRVADIIQIPAFLCRQT 731
            RTSSKSFRGPG+AEGLKILEKVKVAYDLPIVTDVHE++Q +AVG+VADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMAEGLKILEKVKVAYDLPIVTDVHESSQCEAVGKVADIIQIPAFLCRQT 120

Query: 730  DLLVAAAQTGRIINIKKGQFCAPSVMTHSAEKIRLAGNQNVMLCERGTMFGYNDLIVDPR 551
            DLLVAAA TG+IINIKKGQFCAPSVM +SAEKIRLAGN NVM+CERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAHTGKIINIKKGQFCAPSVMENSAEKIRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 550  NLEWMREANCPIVADVTHSLQQPAGKKLEGGGIASGGLRELIPCIARTAVAVGVDGLFME 371
            N EWMREANCP+VAD+THSLQQPAGKKL+GGG+ASGGLRELIPCIARTAVAVGVDG+FME
Sbjct: 181  NFEWMREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTAVAVGVDGIFME 240

Query: 370  VHDDPLNAPVDGPTQWPLRHXXXXXXXXVAIARVTKGKQQFKIDLTPFRD 221
            VHDDPL+APVDGPTQWPLRH        +AIARVTKGKQ+ +IDLTP+RD
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAIARVTKGKQRLQIDLTPYRD 290


>ref|XP_003624281.1| 2-dehydro-3-deoxyphosphooctonate aldolase [Medicago truncatula]
            gi|355499296|gb|AES80499.1|
            2-dehydro-3-deoxyphosphooctonate aldolase [Medicago
            truncatula]
          Length = 290

 Score =  503 bits (1296), Expect = e-140
 Identities = 240/290 (82%), Positives = 272/290 (93%)
 Frame = -1

Query: 1090 MDSSSVLYNQLKSAEPFFVLAGPNVIESEEHVLRMAQHIKAITSKLGLPLIFKSSFDKAN 911
            MD S++LYNQLK+A PFF+LAGPNVIESEEH+++MA+HIKAI+SK G+PL+FKSSFDKAN
Sbjct: 1    MDPSALLYNQLKAAHPFFLLAGPNVIESEEHIMKMAKHIKAISSKFGIPLVFKSSFDKAN 60

Query: 910  RTSSKSFRGPGLAEGLKILEKVKVAYDLPIVTDVHETNQLDAVGRVADIIQIPAFLCRQT 731
            RTSSKSFRGPG+ EGLKILEKVKVAYD+PIVTDVHE +Q +AVGRVADIIQIPAFLCRQT
Sbjct: 61   RTSSKSFRGPGMVEGLKILEKVKVAYDIPIVTDVHEASQCEAVGRVADIIQIPAFLCRQT 120

Query: 730  DLLVAAAQTGRIINIKKGQFCAPSVMTHSAEKIRLAGNQNVMLCERGTMFGYNDLIVDPR 551
            DLLVAAAQTG+IINIKKGQFCAPSVM +SAEK+RLAGN NVM+CERGTMFGYNDLIVDPR
Sbjct: 121  DLLVAAAQTGKIINIKKGQFCAPSVMANSAEKVRLAGNPNVMVCERGTMFGYNDLIVDPR 180

Query: 550  NLEWMREANCPIVADVTHSLQQPAGKKLEGGGIASGGLRELIPCIARTAVAVGVDGLFME 371
            NLEW+REANCP+VAD+THSLQQPAGKKL+GGG+ASGGLRELIPCIART+VAVGVDG+FME
Sbjct: 181  NLEWLREANCPVVADITHSLQQPAGKKLDGGGVASGGLRELIPCIARTSVAVGVDGIFME 240

Query: 370  VHDDPLNAPVDGPTQWPLRHXXXXXXXXVAIARVTKGKQQFKIDLTPFRD 221
            VHDDPL+APVDGPTQWPLRH        +AI+RV+KGK+ F IDLTPFR+
Sbjct: 241  VHDDPLSAPVDGPTQWPLRHLEELLEELIAISRVSKGKKPFNIDLTPFRE 290


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