BLASTX nr result

ID: Bupleurum21_contig00005087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005087
         (1270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK94146.1| unknown [Populus trichocarpa]                          331   2e-88
ref|XP_002306860.1| ABC transporter family protein [Populus tric...   324   3e-86
ref|XP_002529849.1| Adaptin ear-binding coat-associated protein,...   321   3e-85
ref|XP_002276998.1| PREDICTED: uncharacterized protein At1g03900...   313   8e-83
ref|XP_003632429.1| PREDICTED: uncharacterized protein At1g03900...   307   3e-81

>gb|ABK94146.1| unknown [Populus trichocarpa]
          Length = 282

 Score =  331 bits (849), Expect = 2e-88
 Identities = 178/265 (67%), Positives = 197/265 (74%), Gaps = 7/265 (2%)
 Frame = -2

Query: 1167 MSFEEDDDSFEHTLLVVREVSVFKIPPRSTSGGYKCSEWLQSDKIWSGRLRVVSCKTRCE 988
            MSFEEDD+SFEHTLLVVREVSV+KIPPRST+GGYKC EWLQSDKIWSGRLRVVSCK RCE
Sbjct: 1    MSFEEDDESFEHTLLVVREVSVYKIPPRSTAGGYKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 987  IRLEDPNSSDLFAACFVHPGQRENAVESVLDSSRYFVLKIEDGTGKHAFIGLGFAERNEA 808
            IRLEDPNS DLFAACFV+PGQREN+VE+VLDSSRYFVLKIEDG GKHAF+GLGFAERNEA
Sbjct: 61   IRLEDPNSGDLFAACFVNPGQRENSVETVLDSSRYFVLKIEDGGGKHAFVGLGFAERNEA 120

Query: 807  FDFNVALSDHDKYLKRESDKEVGETSD-DNHIDIHPVVNQRLKEGETIRINVKNKP---X 640
            FDFNVALSDH+KY++RE++KE GETS+ D HIDIHP VNQRLKEGETIRINVK KP    
Sbjct: 121  FDFNVALSDHEKYVRRENEKESGETSESDAHIDIHPAVNQRLKEGETIRINVKPKPSAGA 180

Query: 639  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVRLTSSSH-DVALK 463
                                                       PA  R+T+ +H  + LK
Sbjct: 181  GMLSAAGLSGGVSTTGKPKPLAIAPPPTGVGKLRSPLPPPPNDPAAARMTAGNHGGIGLK 240

Query: 462  GS--KETKHSTDSLSDLSQLERNLP 394
             S  + T+ STDSLSDLS LERNLP
Sbjct: 241  VSPKESTRWSTDSLSDLSPLERNLP 265


>ref|XP_002306860.1| ABC transporter family protein [Populus trichocarpa]
            gi|222856309|gb|EEE93856.1| ABC transporter family
            protein [Populus trichocarpa]
          Length = 288

 Score =  324 bits (830), Expect = 3e-86
 Identities = 174/263 (66%), Positives = 195/263 (74%), Gaps = 7/263 (2%)
 Frame = -2

Query: 1167 MSFEEDDDSFEHTLLVVREVSVFKIPPRSTSGGYKCSEWLQSDKIWSGRLRVVSCKTRCE 988
            MSFEEDD+SFEHTLLVVREVSV+KIPPRST+GGYKC EWLQSDKIWSGRLRVVSCK RCE
Sbjct: 1    MSFEEDDESFEHTLLVVREVSVYKIPPRSTAGGYKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 987  IRLEDPNSSDLFAACFVHPGQRENAVESVLDSSRYFVLKIEDGTGKHAFIGLGFAERNEA 808
            IRLEDPNS DLFAACFV+PGQREN+VE+VLDSSRYFVLKIEDG GKHAF+GLGFAERNEA
Sbjct: 61   IRLEDPNSGDLFAACFVNPGQRENSVETVLDSSRYFVLKIEDGGGKHAFVGLGFAERNEA 120

Query: 807  FDFNVALSDHDKYLKRESDKEVGETSD-DNHIDIHPVVNQRLKEGETIRINVKNKP---X 640
            FDFNVALSDH+KY++RE++KE GETS+ D HIDIHP VNQRLKEGETIRINVK KP    
Sbjct: 121  FDFNVALSDHEKYVRRENEKESGETSESDAHIDIHPAVNQRLKEGETIRINVKPKPSAGA 180

Query: 639  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVRLTSSSH-DVALK 463
                                                       PA  R+T+ +H  + LK
Sbjct: 181  GMLSAAGLSGGVSTTGKPKPLAIAPPPTGVGKLRSPLPPPPNDPAAARMTAGNHGGIGLK 240

Query: 462  GS--KETKHSTDSLSDLSQLERN 400
             S  + T+ STDSLSDLS LE++
Sbjct: 241  VSPKESTRWSTDSLSDLSPLEKS 263


>ref|XP_002529849.1| Adaptin ear-binding coat-associated protein, putative [Ricinus
            communis] gi|223530677|gb|EEF32550.1| Adaptin ear-binding
            coat-associated protein, putative [Ricinus communis]
          Length = 282

 Score =  321 bits (822), Expect = 3e-85
 Identities = 171/265 (64%), Positives = 191/265 (72%), Gaps = 7/265 (2%)
 Frame = -2

Query: 1167 MSFEEDDDSFEHTLLVVREVSVFKIPPRSTSGGYKCSEWLQSDKIWSGRLRVVSCKTRCE 988
            MSF++D++S EHTLLVVREVSV+KIPPRSTSGGYKC EWLQSDKIWSGRLRVVSCK RCE
Sbjct: 1    MSFDDDEESMEHTLLVVREVSVYKIPPRSTSGGYKCGEWLQSDKIWSGRLRVVSCKDRCE 60

Query: 987  IRLEDPNSSDLFAACFVHPGQRENAVESVLDSSRYFVLKIEDGTGKHAFIGLGFAERNEA 808
            IRLEDPNS +LFAACFV PGQREN+VE+VLDSSRYFVLKIEDG GKHAFIGLGF ERNEA
Sbjct: 61   IRLEDPNSGELFAACFVLPGQRENSVETVLDSSRYFVLKIEDGRGKHAFIGLGFGERNEA 120

Query: 807  FDFNVALSDHDKYLKRESDKEVGETSD-DNHIDIHPVVNQRLKEGETIRINVKNKP---- 643
            FDFNVALSDH+KY++RE++K+  ETS+ D HIDIHP VN RLKEGETIRINVK+KP    
Sbjct: 121  FDFNVALSDHEKYVRRENEKDSAETSESDTHIDIHPAVNHRLKEGETIRINVKHKPSSGT 180

Query: 642  -XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVRLTSSSHDVAL 466
                                                         PA  R T+++H V L
Sbjct: 181  GMLSAAGLSGSVSGTTKPKPLALGIAPPPSGGGKIRSPLPPPPNDPAAARRTATNHSVGL 240

Query: 465  KGSKE-TKHSTDSLSDLSQLERNLP 394
            +  KE T  STD LSDLS LERNLP
Sbjct: 241  REQKENTNCSTDPLSDLSPLERNLP 265


>ref|XP_002276998.1| PREDICTED: uncharacterized protein At1g03900 isoform 1 [Vitis
            vinifera] gi|147765951|emb|CAN67814.1| hypothetical
            protein VITISV_002501 [Vitis vinifera]
            gi|297744166|emb|CBI37136.3| unnamed protein product
            [Vitis vinifera]
          Length = 278

 Score =  313 bits (801), Expect = 8e-83
 Identities = 170/263 (64%), Positives = 192/263 (73%), Gaps = 5/263 (1%)
 Frame = -2

Query: 1167 MSFEEDDDSFEHTLLVVREVSVFKIPPRSTSGGYKCSEWLQSDKIWSGRLRVVSCKTRCE 988
            MSF+ED+ +FEHTLLVVREVSV+KIPPRSTSGGYKC EWLQSD IW+GRLRVVSCK RCE
Sbjct: 1    MSFDEDE-AFEHTLLVVREVSVYKIPPRSTSGGYKCGEWLQSDLIWTGRLRVVSCKDRCE 59

Query: 987  IRLEDPNSSDLFAACFVHPGQRENAVESVLDSSRYFVLKIEDGTGKHAFIGLGFAERNEA 808
            IRLEDPNS +LFAACFV PGQRE++VE+VLDSSRYFVLKIEDG GKHAFIGLGFAERNEA
Sbjct: 60   IRLEDPNSGELFAACFVLPGQRESSVETVLDSSRYFVLKIEDGAGKHAFIGLGFAERNEA 119

Query: 807  FDFNVALSDHDKYLKRESDKEVGETSDD-NHIDIHPVVNQRLKEGETIRINVKNKP---X 640
            FDFNVALSDH+KY++RE +KE GE SDD +HIDIHP VN RLK+GETIRINVKNK     
Sbjct: 120  FDFNVALSDHEKYVRREQEKETGEASDDGSHIDIHPAVNHRLKDGETIRINVKNKATSGT 179

Query: 639  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVRLTSSSHDVALKG 460
                                                       PA  R+TSS  D  LKG
Sbjct: 180  GMLSAAGLSGTQSGTGKPKTLGLAPPPTGAGKIRSPLPPPPNDPAAARMTSSGVD--LKG 237

Query: 459  SKE-TKHSTDSLSDLSQLERNLP 394
            S+E  +H+TD+ S LSQLE++LP
Sbjct: 238  SEEDMRHTTDAFSGLSQLEKSLP 260


>ref|XP_003632429.1| PREDICTED: uncharacterized protein At1g03900 isoform 2 [Vitis
            vinifera]
          Length = 284

 Score =  307 bits (787), Expect = 3e-81
 Identities = 168/259 (64%), Positives = 188/259 (72%), Gaps = 5/259 (1%)
 Frame = -2

Query: 1167 MSFEEDDDSFEHTLLVVREVSVFKIPPRSTSGGYKCSEWLQSDKIWSGRLRVVSCKTRCE 988
            MSF+ED+ +FEHTLLVVREVSV+KIPPRSTSGGYKC EWLQSD IW+GRLRVVSCK RCE
Sbjct: 1    MSFDEDE-AFEHTLLVVREVSVYKIPPRSTSGGYKCGEWLQSDLIWTGRLRVVSCKDRCE 59

Query: 987  IRLEDPNSSDLFAACFVHPGQRENAVESVLDSSRYFVLKIEDGTGKHAFIGLGFAERNEA 808
            IRLEDPNS +LFAACFV PGQRE++VE+VLDSSRYFVLKIEDG GKHAFIGLGFAERNEA
Sbjct: 60   IRLEDPNSGELFAACFVLPGQRESSVETVLDSSRYFVLKIEDGAGKHAFIGLGFAERNEA 119

Query: 807  FDFNVALSDHDKYLKRESDKEVGETSDD-NHIDIHPVVNQRLKEGETIRINVKNKP---X 640
            FDFNVALSDH+KY++RE +KE GE SDD +HIDIHP VN RLK+GETIRINVKNK     
Sbjct: 120  FDFNVALSDHEKYVRREQEKETGEASDDGSHIDIHPAVNHRLKDGETIRINVKNKATSGT 179

Query: 639  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVRLTSSSHDVALKG 460
                                                       PA  R+TSS  D  LKG
Sbjct: 180  GMLSAAGLSGTQSGTGKPKTLGLAPPPTGAGKIRSPLPPPPNDPAAARMTSSGVD--LKG 237

Query: 459  SKE-TKHSTDSLSDLSQLE 406
            S+E  +H+TD+ S LSQLE
Sbjct: 238  SEEDMRHTTDAFSGLSQLE 256


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