BLASTX nr result

ID: Bupleurum21_contig00005082 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005082
         (653 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304122.1| predicted protein [Populus trichocarpa] gi|2...   217   1e-54
gb|AEH57631.1| nucleoside diphosphate kinase [Solanum tuberosum]      216   3e-54
ref|XP_002272468.2| PREDICTED: nucleoside diphosphate kinase-lik...   216   3e-54
ref|XP_002892950.1| nucleoside diphosphate kinase family protein...   210   2e-52
emb|CBI35849.3| unnamed protein product [Vitis vinifera]              208   6e-52

>ref|XP_002304122.1| predicted protein [Populus trichocarpa] gi|222841554|gb|EEE79101.1|
           predicted protein [Populus trichocarpa]
          Length = 174

 Score =  217 bits (553), Expect = 1e-54
 Identities = 102/153 (66%), Positives = 127/153 (83%)
 Frame = -2

Query: 643 GKSKEECTLAMIKPDGIVGNYTNVIKKIILGAGFSIHKEMTLQLDEDKAKGFYAEHSSRS 464
           G  ++E TLAMIKPDG++GNYT  IK++I+  GFSI +E+T QLD+D A  FYAEHSSRS
Sbjct: 22  GSEEKEKTLAMIKPDGLLGNYTERIKEVIVDYGFSILREITAQLDQDSASSFYAEHSSRS 81

Query: 463 FFPSLVQYMTSGPVLIMVLEKVDAVSDWRALIGPTDPSTAKVTHPDSIRAMCGVSLQRNC 284
           FFPSL++YMTSGPVL+MVLEK +A++DWR LIGPTD   AK+THP+SIRAMCG   ++NC
Sbjct: 82  FFPSLIKYMTSGPVLVMVLEKENAIADWRTLIGPTDACKAKITHPNSIRAMCGQDSEKNC 141

Query: 283 VHGSDSTVSAAREISFFFKETNSGENVSGHDEL 185
           VHGSDS +SA REISFFF++ +SGE  + HDEL
Sbjct: 142 VHGSDSLLSAQREISFFFEDVSSGETNTTHDEL 174


>gb|AEH57631.1| nucleoside diphosphate kinase [Solanum tuberosum]
          Length = 157

 Score =  216 bits (550), Expect = 3e-54
 Identities = 106/154 (68%), Positives = 126/154 (81%)
 Frame = -2

Query: 646 DGKSKEECTLAMIKPDGIVGNYTNVIKKIILGAGFSIHKEMTLQLDEDKAKGFYAEHSSR 467
           D  ++ E TLA+IKPDG+ GN+TN +K+ IL  GF I +E  +QLDED  K FYAEHSSR
Sbjct: 5   DSSTETERTLAIIKPDGVSGNHTNSVKETILNHGFKIKEESFIQLDEDHVKSFYAEHSSR 64

Query: 466 SFFPSLVQYMTSGPVLIMVLEKVDAVSDWRALIGPTDPSTAKVTHPDSIRAMCGVSLQRN 287
           SFFPSLV+YMTSGPVLIMVLEK +A++DWR LIGPTDP  AKVTHP S+RA+CG++LQ N
Sbjct: 65  SFFPSLVEYMTSGPVLIMVLEKGNAIADWRTLIGPTDPLKAKVTHPHSVRAICGLNLQNN 124

Query: 286 CVHGSDSTVSAAREISFFFKETNSGENVSGHDEL 185
           CVHGSDS  SA+REISFFFK T+SG + S HDEL
Sbjct: 125 CVHGSDSPQSASREISFFFKTTSSG-HASQHDEL 157


>ref|XP_002272468.2| PREDICTED: nucleoside diphosphate kinase-like [Vitis vinifera]
          Length = 183

 Score =  216 bits (550), Expect = 3e-54
 Identities = 108/153 (70%), Positives = 126/153 (82%)
 Frame = -2

Query: 643 GKSKEECTLAMIKPDGIVGNYTNVIKKIILGAGFSIHKEMTLQLDEDKAKGFYAEHSSRS 464
           G +++E T AMIKPDG+ GNYT+ IK  IL +GF I +EMT++LDED A  FYAEHSSRS
Sbjct: 31  GSAEKEKTFAMIKPDGLSGNYTDEIKNAILESGFIILREMTVRLDEDTAGKFYAEHSSRS 90

Query: 463 FFPSLVQYMTSGPVLIMVLEKVDAVSDWRALIGPTDPSTAKVTHPDSIRAMCGVSLQRNC 284
           FFP+LV+YMTSGPVL+MVLEKV+AV+DWRALIGPTD   AKVTHP SIRAMCG  L++NC
Sbjct: 91  FFPALVKYMTSGPVLVMVLEKVNAVADWRALIGPTDAQKAKVTHPHSIRAMCGQDLEKNC 150

Query: 283 VHGSDSTVSAAREISFFFKETNSGENVSGHDEL 185
           VHGSDS  SA REISFFF+E +SG   S HDEL
Sbjct: 151 VHGSDSPQSAEREISFFFEEFSSGAVGSKHDEL 183


>ref|XP_002892950.1| nucleoside diphosphate kinase family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338792|gb|EFH69209.1| nucleoside
           diphosphate kinase family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 181

 Score =  210 bits (534), Expect = 2e-52
 Identities = 105/156 (67%), Positives = 122/156 (78%), Gaps = 1/156 (0%)
 Frame = -2

Query: 649 GDGKSKEECTLAMIKPDGIVGNYTNVIKKIILGAGFSIHKEMTLQLDEDKAKGFYAEHSS 470
           G+G S EE TLAMIKPDG+ GNYT+ IK+I++ A F+I KEM  QLD+D A  FY EHSS
Sbjct: 26  GNGASSEERTLAMIKPDGVSGNYTDEIKRIVVEASFNIVKEMLTQLDKDTASAFYDEHSS 85

Query: 469 RSFFPSLVQYMTSGPVLIMVLEKVDAVSDWRALIGPTDPSTAKVTHPDSIRAMCGVSLQR 290
           RSFFP LV YMTSGPV +MVLEK +AVSDWR LIGPTD   AK++HP SIRA+CG + Q+
Sbjct: 86  RSFFPDLVTYMTSGPVFVMVLEKQNAVSDWRGLIGPTDAQRAKISHPHSIRALCGKNSQK 145

Query: 289 NCVHGSDSTVSAAREISFFFKETNSGENVS-GHDEL 185
           NCVHGSDST SA REI FFFK+  SG+  S  HDEL
Sbjct: 146 NCVHGSDSTSSAEREIKFFFKDVVSGDIASQHHDEL 181


>emb|CBI35849.3| unnamed protein product [Vitis vinifera]
          Length = 143

 Score =  208 bits (530), Expect = 6e-52
 Identities = 104/143 (72%), Positives = 119/143 (83%)
 Frame = -2

Query: 613 MIKPDGIVGNYTNVIKKIILGAGFSIHKEMTLQLDEDKAKGFYAEHSSRSFFPSLVQYMT 434
           MIKPDG+ GNYT+ IK  IL +GF I +EMT++LDED A  FYAEHSSRSFFP+LV+YMT
Sbjct: 1   MIKPDGLSGNYTDEIKNAILESGFIILREMTVRLDEDTAGKFYAEHSSRSFFPALVKYMT 60

Query: 433 SGPVLIMVLEKVDAVSDWRALIGPTDPSTAKVTHPDSIRAMCGVSLQRNCVHGSDSTVSA 254
           SGPVL+MVLEKV+AV+DWRALIGPTD   AKVTHP SIRAMCG  L++NCVHGSDS  SA
Sbjct: 61  SGPVLVMVLEKVNAVADWRALIGPTDAQKAKVTHPHSIRAMCGQDLEKNCVHGSDSPQSA 120

Query: 253 AREISFFFKETNSGENVSGHDEL 185
            REISFFF+E +SG   S HDEL
Sbjct: 121 EREISFFFEEFSSGAVGSKHDEL 143


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