BLASTX nr result

ID: Bupleurum21_contig00005081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005081
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280167.1| PREDICTED: origin recognition complex subuni...   399   e-109
emb|CBI26946.3| unnamed protein product [Vitis vinifera]              396   e-108
ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|2...   387   e-105
ref|XP_003536655.1| PREDICTED: origin recognition complex subuni...   360   2e-97
gb|ACU18384.1| unknown [Glycine max]                                  360   2e-97

>ref|XP_002280167.1| PREDICTED: origin recognition complex subunit 4-like [Vitis vinifera]
          Length = 418

 Score =  399 bits (1025), Expect = e-109
 Identities = 201/302 (66%), Positives = 230/302 (76%)
 Frame = +3

Query: 144  GWENPAEKALILLRTRLCNPNFIFTHFSHSPDSNYSKLKFIISSSVTEACNNSVLLLGPR 323
            G ENPAE ALILLR+R+CNPNF+FT FS SPDSNYSKLKFIISSSVTEACNNS+LLLGPR
Sbjct: 3    GRENPAEDALILLRSRICNPNFVFTPFSDSPDSNYSKLKFIISSSVTEACNNSILLLGPR 62

Query: 324  GCGKFAXXXXXXXXXXKEFPDMITAIKLNGLLHSDDKCALKEIARQLCVEHQLSFSKAAS 503
            G GK A           E  DMI+ I+LNGLLHSDD CA+KEIARQLCVEHQL FSK AS
Sbjct: 63   GSGKTAVLELVIRDLLAEHADMISVIRLNGLLHSDDNCAVKEIARQLCVEHQLLFSKMAS 122

Query: 504  FDDNNQFMIEILRECGLAHKTVIFILDEFDIFAQGKQRLLYSLLDAMXXXXXXXXXXXXX 683
            FDDN+QFMI +LRECGLAHKT+IF+LDEFD F QGKQRLLYSLLDAM             
Sbjct: 123  FDDNSQFMIAMLRECGLAHKTIIFVLDEFDFFTQGKQRLLYSLLDAMQSVTSQAVVIGVS 182

Query: 684  CRLDADQLLEKRVRSRFSHRKLLFLSPLKEDLQGLMKHMXXXXXXXXXXXXYTAEFNARL 863
            CRLDADQLLEKRVRSRFSHRK+LFL P KEDLQ    H+            Y  EFN +L
Sbjct: 183  CRLDADQLLEKRVRSRFSHRKVLFLPPSKEDLQRYFLHIFSLPVDTSLPNDYAVEFNMKL 242

Query: 864  VKLFDDGRFRGIMDTLSDSDSTFNHLIRFLFIAVCHMDMKTGFLSLENFKVALTGVQRQP 1043
              +  D RF+ I++TL +SDST  HL+RFLF AVCHMD+++GFLSL+NF+ A++ +QRQP
Sbjct: 243  HHILADERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAMSSIQRQP 302

Query: 1044 KL 1049
            K+
Sbjct: 303  KM 304


>emb|CBI26946.3| unnamed protein product [Vitis vinifera]
          Length = 425

 Score =  396 bits (1017), Expect = e-108
 Identities = 202/309 (65%), Positives = 233/309 (75%), Gaps = 7/309 (2%)
 Frame = +3

Query: 144  GWENPAEKALILLRTRLCNPNFIFTHFSHSPDSNYSKLKFIISSSVTEACNNSVLLLGPR 323
            G ENPAE ALILLR+R+CNPNF+FT FS SPDSNYSKLKFIISSSVTEACNNS+LLLGPR
Sbjct: 3    GRENPAEDALILLRSRICNPNFVFTPFSDSPDSNYSKLKFIISSSVTEACNNSILLLGPR 62

Query: 324  GCGKFAXXXXXXXXXXKEFPDMITAIKLNGLLHSDDKCALKEIARQLCVEHQLSFSKAAS 503
            G GK A           E  DMI+ I+LNGLLHSDD CA+KEIARQLCVEHQL FSK AS
Sbjct: 63   GSGKTAVLELVIRDLLAEHADMISVIRLNGLLHSDDNCAVKEIARQLCVEHQLLFSKMAS 122

Query: 504  FDDNNQFMIEILRECGLAHKTVIFILDEFDIFAQ-------GKQRLLYSLLDAMXXXXXX 662
            FDDN+QFMI +LRECGLAHKT+IF+LDEFD F Q       GKQRLLYSLLDAM      
Sbjct: 123  FDDNSQFMIAMLRECGLAHKTIIFVLDEFDFFTQARLPLSHGKQRLLYSLLDAMQSVTSQ 182

Query: 663  XXXXXXXCRLDADQLLEKRVRSRFSHRKLLFLSPLKEDLQGLMKHMXXXXXXXXXXXXYT 842
                   CRLDADQLLEKRVRSRFSHRK+LFL P KEDLQ L++H+            Y 
Sbjct: 183  AVVIGVSCRLDADQLLEKRVRSRFSHRKVLFLPPSKEDLQRLLEHIFSLPVDTSLPNDYA 242

Query: 843  AEFNARLVKLFDDGRFRGIMDTLSDSDSTFNHLIRFLFIAVCHMDMKTGFLSLENFKVAL 1022
             EFN +L  +  D RF+ I++TL +SDST  HL+RFLF AVCHMD+++GFLSL+NF+ A+
Sbjct: 243  VEFNMKLHHILADERFKEIINTLLNSDSTVKHLLRFLFYAVCHMDLESGFLSLDNFRTAM 302

Query: 1023 TGVQRQPKL 1049
            + +QRQPK+
Sbjct: 303  SSIQRQPKM 311


>ref|XP_002312422.1| predicted protein [Populus trichocarpa] gi|222852242|gb|EEE89789.1|
            predicted protein [Populus trichocarpa]
          Length = 431

 Score =  387 bits (993), Expect = e-105
 Identities = 198/302 (65%), Positives = 228/302 (75%)
 Frame = +3

Query: 141  MGWENPAEKALILLRTRLCNPNFIFTHFSHSPDSNYSKLKFIISSSVTEACNNSVLLLGP 320
            MG EN AEKA IL+R+RLCNPNFIF   S SPDSNYSKLKFIISSS+ EACNNS+LLLGP
Sbjct: 1    MGIENLAEKAQILIRSRLCNPNFIFKPLSDSPDSNYSKLKFIISSSIMEACNNSILLLGP 60

Query: 321  RGCGKFAXXXXXXXXXXKEFPDMITAIKLNGLLHSDDKCALKEIARQLCVEHQLSFSKAA 500
            RG GK A          +E+PD IT I+LNGLLHS+D  A KEIARQLC+EH L FSK A
Sbjct: 61   RGSGKVAVLELVLSDLLEEYPDTITVIRLNGLLHSEDNSAFKEIARQLCMEHHLLFSKMA 120

Query: 501  SFDDNNQFMIEILRECGLAHKTVIFILDEFDIFAQGKQRLLYSLLDAMXXXXXXXXXXXX 680
            SFDDN+QFMI +LRECGLAHKTVIF LDEFD+FAQGKQRLLYSLLDAM            
Sbjct: 121  SFDDNSQFMIAMLRECGLAHKTVIFALDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVVGV 180

Query: 681  XCRLDADQLLEKRVRSRFSHRKLLFLSPLKEDLQGLMKHMXXXXXXXXXXXXYTAEFNAR 860
             CRLDADQLLEKRVRSRFSHRKLLFL P KED+Q L++H+            Y AEFN +
Sbjct: 181  SCRLDADQLLEKRVRSRFSHRKLLFLPPSKEDVQRLLEHILSLPMDSSLAHDYAAEFNEK 240

Query: 861  LVKLFDDGRFRGIMDTLSDSDSTFNHLIRFLFIAVCHMDMKTGFLSLENFKVALTGVQRQ 1040
            L  +  D RF+ I+    +S+ST NHL+RFLFIA+ +M++K+GFLSLENFK AL+ +QRQ
Sbjct: 241  LQSILADERFKEIISNYLNSNSTTNHLLRFLFIAISNMELKSGFLSLENFKAALSSIQRQ 300

Query: 1041 PK 1046
            PK
Sbjct: 301  PK 302


>ref|XP_003536655.1| PREDICTED: origin recognition complex subunit 4-like [Glycine max]
          Length = 413

 Score =  360 bits (925), Expect = 2e-97
 Identities = 186/303 (61%), Positives = 221/303 (72%)
 Frame = +3

Query: 141  MGWENPAEKALILLRTRLCNPNFIFTHFSHSPDSNYSKLKFIISSSVTEACNNSVLLLGP 320
            M  EN   KA+ LLR+R+C+P FIF   S SP+SNYSKLKF+ISSSVTEACNNS+LLLGP
Sbjct: 1    MEQENHKIKAVSLLRSRICDPKFIF--ISESPESNYSKLKFMISSSVTEACNNSILLLGP 58

Query: 321  RGCGKFAXXXXXXXXXXKEFPDMITAIKLNGLLHSDDKCALKEIARQLCVEHQLSFSKAA 500
            RG GK A          +E+PD ++ I+LNGLLHSDD  A KEIARQLC+EHQL FSKAA
Sbjct: 59   RGSGKNAVLELVIQDLLQEYPDSVSVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAA 118

Query: 501  SFDDNNQFMIEILRECGLAHKTVIFILDEFDIFAQGKQRLLYSLLDAMXXXXXXXXXXXX 680
            SFDDN+QFM+ IL+ECGLAHKTVIF+LDEF +FAQGKQRLLYSLLDAM            
Sbjct: 119  SFDDNSQFMVAILKECGLAHKTVIFVLDEFHLFAQGKQRLLYSLLDAMQSITSQAVVLGI 178

Query: 681  XCRLDADQLLEKRVRSRFSHRKLLFLSPLKEDLQGLMKHMXXXXXXXXXXXXYTAEFNAR 860
             CRLDADQLLEKRVRSRFSHRKLLFL P  ED Q L+ H+            Y  EFN +
Sbjct: 179  SCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHILTLPIDSSFPHAYAVEFNRK 238

Query: 861  LVKLFDDGRFRGIMDTLSDSDSTFNHLIRFLFIAVCHMDMKTGFLSLENFKVALTGVQRQ 1040
            +  + +D RF+  ++   + DS+  HL+RFLF AV HMD++TGFLS ENF++A T +QRQ
Sbjct: 239  VQNIIEDRRFKETLNKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSRENFEIAFTSIQRQ 298

Query: 1041 PKL 1049
            PKL
Sbjct: 299  PKL 301


>gb|ACU18384.1| unknown [Glycine max]
          Length = 372

 Score =  360 bits (925), Expect = 2e-97
 Identities = 186/303 (61%), Positives = 221/303 (72%)
 Frame = +3

Query: 141  MGWENPAEKALILLRTRLCNPNFIFTHFSHSPDSNYSKLKFIISSSVTEACNNSVLLLGP 320
            M  EN   KA+ LLR+R+C+P FIF   S SP+SNYSKLKF+ISSSVTEACNNS+LLLGP
Sbjct: 1    MEQENHKIKAVSLLRSRICDPKFIF--ISESPESNYSKLKFMISSSVTEACNNSILLLGP 58

Query: 321  RGCGKFAXXXXXXXXXXKEFPDMITAIKLNGLLHSDDKCALKEIARQLCVEHQLSFSKAA 500
            RG GK A          +E+PD ++ I+LNGLLHSDD  A KEIARQLC+EHQL FSKAA
Sbjct: 59   RGSGKNAVLELVIQDLLQEYPDSVSVIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAA 118

Query: 501  SFDDNNQFMIEILRECGLAHKTVIFILDEFDIFAQGKQRLLYSLLDAMXXXXXXXXXXXX 680
            SFDDN+QFM+ IL+ECGLAHKTVIF+LDEF +FAQGKQRLLYSLLDAM            
Sbjct: 119  SFDDNSQFMVAILKECGLAHKTVIFVLDEFHLFAQGKQRLLYSLLDAMQSITSQAVVLGI 178

Query: 681  XCRLDADQLLEKRVRSRFSHRKLLFLSPLKEDLQGLMKHMXXXXXXXXXXXXYTAEFNAR 860
             CRLDADQLLEKRVRSRFSHRKLLFL P  ED Q L+ H+            Y  EFN +
Sbjct: 179  SCRLDADQLLEKRVRSRFSHRKLLFLPPSIEDSQKLLMHILTLPIDSSFPHAYAVEFNRK 238

Query: 861  LVKLFDDGRFRGIMDTLSDSDSTFNHLIRFLFIAVCHMDMKTGFLSLENFKVALTGVQRQ 1040
            +  + +D RF+  ++   + DS+  HL+RFLF AV HMD++TGFLS ENF++A T +QRQ
Sbjct: 239  VQNIIEDRRFKETLNKYLNVDSSVKHLLRFLFCAVSHMDLQTGFLSRENFEIAFTSIQRQ 298

Query: 1041 PKL 1049
            PKL
Sbjct: 299  PKL 301


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