BLASTX nr result

ID: Bupleurum21_contig00005065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005065
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004137430.1| PREDICTED: ATP synthase subunit gamma, mitoc...   108   5e-22
sp|P26360.2|ATPG3_IPOBA RecName: Full=ATP synthase subunit gamma...   107   1e-21
ref|XP_002318589.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_002328641.1| predicted protein [Populus trichocarpa] gi|1...   105   3e-21
ref|XP_002284053.1| PREDICTED: ATP synthase subunit gamma, mitoc...   104   9e-21

>ref|XP_004137430.1| PREDICTED: ATP synthase subunit gamma, mitochondrial-like [Cucumis
           sativus] gi|449519214|ref|XP_004166630.1| PREDICTED: ATP
           synthase subunit gamma, mitochondrial-like [Cucumis
           sativus]
          Length = 322

 Score =  108 bits (270), Expect = 5e-22
 Identities = 63/78 (80%), Positives = 65/78 (83%), Gaps = 2/78 (2%)
 Frame = +3

Query: 126 EGRRL--VASPNSFTVLRSSLLPPTEEKVPLGVRSISTQIVRNRMKSVKNIQKITKAMKM 299
           EGRRL  V SP   T LRSSLL   EE+ PLGVRSISTQ+VR RMKSVKNIQKITKAMKM
Sbjct: 9   EGRRLATVISPQPITALRSSLL--YEEQAPLGVRSISTQVVRTRMKSVKNIQKITKAMKM 66

Query: 300 VAASKLRAIQVRAENSRG 353
           VAASKLRAIQVR ENSRG
Sbjct: 67  VAASKLRAIQVRTENSRG 84


>sp|P26360.2|ATPG3_IPOBA RecName: Full=ATP synthase subunit gamma, mitochondrial; AltName:
           Full=F-ATPase gamma subunit; Flags: Precursor
           gi|303626|dbj|BAA03526.1| F1-ATPase gammma subunit
           [Ipomoea batatas]
          Length = 326

 Score =  107 bits (266), Expect = 1e-21
 Identities = 61/80 (76%), Positives = 64/80 (80%), Gaps = 4/80 (5%)
 Frame = +3

Query: 126 EGRRLVA----SPNSFTVLRSSLLPPTEEKVPLGVRSISTQIVRNRMKSVKNIQKITKAM 293
           EGRRL A    SP     LRSSL+ P+EE    GVRSISTQ+VRNRMKSVKNIQKITKAM
Sbjct: 9   EGRRLAAAPFTSPTPLNALRSSLVSPSEEIGLSGVRSISTQVVRNRMKSVKNIQKITKAM 68

Query: 294 KMVAASKLRAIQVRAENSRG 353
           KMVAASKLRAIQ RAENSRG
Sbjct: 69  KMVAASKLRAIQTRAENSRG 88


>ref|XP_002318589.1| predicted protein [Populus trichocarpa] gi|222859262|gb|EEE96809.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/76 (78%), Positives = 64/76 (84%)
 Frame = +3

Query: 126 EGRRLVASPNSFTVLRSSLLPPTEEKVPLGVRSISTQIVRNRMKSVKNIQKITKAMKMVA 305
           EGRR V SP   T +RSSL+P  E+  PLGVRSISTQ+VRNRMKSVKNIQKITKAMKMVA
Sbjct: 10  EGRRFV-SPQPITDVRSSLIP--EDHAPLGVRSISTQVVRNRMKSVKNIQKITKAMKMVA 66

Query: 306 ASKLRAIQVRAENSRG 353
           ASKLR IQ RAENSRG
Sbjct: 67  ASKLRLIQTRAENSRG 82


>ref|XP_002328641.1| predicted protein [Populus trichocarpa] gi|118483625|gb|ABK93707.1|
           unknown [Populus trichocarpa]
           gi|222838817|gb|EEE77168.1| predicted protein [Populus
           trichocarpa]
          Length = 324

 Score =  105 bits (263), Expect = 3e-21
 Identities = 60/79 (75%), Positives = 65/79 (82%), Gaps = 3/79 (3%)
 Frame = +3

Query: 126 EGRRLVA---SPNSFTVLRSSLLPPTEEKVPLGVRSISTQIVRNRMKSVKNIQKITKAMK 296
           EGRR  +   SP  FT +RS+L+P  EE VPLGVRSISTQ+VRNRMKSVKNIQKITKAMK
Sbjct: 10  EGRRFASPLISPQPFTPVRSALIP--EEHVPLGVRSISTQVVRNRMKSVKNIQKITKAMK 67

Query: 297 MVAASKLRAIQVRAENSRG 353
           MVAASKLR IQ RAE SRG
Sbjct: 68  MVAASKLRLIQSRAEKSRG 86


>ref|XP_002284053.1| PREDICTED: ATP synthase subunit gamma, mitochondrial [Vitis
           vinifera] gi|297733875|emb|CBI15122.3| unnamed protein
           product [Vitis vinifera]
          Length = 322

 Score =  104 bits (259), Expect = 9e-21
 Identities = 59/78 (75%), Positives = 64/78 (82%), Gaps = 2/78 (2%)
 Frame = +3

Query: 126 EGRRL--VASPNSFTVLRSSLLPPTEEKVPLGVRSISTQIVRNRMKSVKNIQKITKAMKM 299
           EGRR   + +P     +RSS +P  EE+ PLGVRSISTQIVRNRMKSVKNIQKITKAMKM
Sbjct: 9   EGRRFAPLITPRPIAAVRSSPIP--EEQAPLGVRSISTQIVRNRMKSVKNIQKITKAMKM 66

Query: 300 VAASKLRAIQVRAENSRG 353
           VAASKLRAIQ RAENSRG
Sbjct: 67  VAASKLRAIQTRAENSRG 84


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