BLASTX nr result

ID: Bupleurum21_contig00005056 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005056
         (1946 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release ...   771   0.0  
emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]   771   0.0  
ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release ...   768   0.0  
ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release ...   766   0.0  
gb|ADN33689.1| eukaryotic peptide chain release factor subunit [...   766   0.0  

>ref|XP_002271656.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Vitis
            vinifera]
          Length = 437

 Score =  771 bits (1990), Expect = 0.0
 Identities = 384/423 (90%), Positives = 403/423 (95%)
 Frame = -3

Query: 1869 MADAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 1690
            MAD HETDKN               ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1    MADGHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1689 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1510
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1509 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG 1330
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1329 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS 1150
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INP+TSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1149 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEELSQDTG 970
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILS+VKFIQEKRLIGKYFEE+SQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 969  KYVFGVDDTLKALEMGAVEILIVWENLDMSRYVLKNNTTGEIIVKHLNKDQDAVQSHFRD 790
            KYVFGVDDTLKALEMGAVE LIVWENLD+SRYVLKNN TGEI++KHLNK+Q++ QSHFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 789  AATNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 610
             AT+AELEVQEKMSLLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 609  RTF 601
            R+F
Sbjct: 421  RSF 423


>emb|CAN63440.1| hypothetical protein VITISV_020937 [Vitis vinifera]
          Length = 437

 Score =  771 bits (1990), Expect = 0.0
 Identities = 384/423 (90%), Positives = 403/423 (95%)
 Frame = -3

Query: 1869 MADAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 1690
            MAD HETDKN               ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1    MADGHETDKNIEIWNIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1689 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1510
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1509 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG 1330
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKF+VDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFTVDLPKKHG 180

Query: 1329 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS 1150
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INP+TSQPNVSGLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVSGLILAGSADFKTELSQS 240

Query: 1149 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEELSQDTG 970
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILS+VKFIQEKRLIGKYFEE+SQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 969  KYVFGVDDTLKALEMGAVEILIVWENLDMSRYVLKNNTTGEIIVKHLNKDQDAVQSHFRD 790
            KYVFGVDDTLKALEMGAVE LIVWENLD+SRYVLKNN TGEI++KHLNK+Q++ QSHFRD
Sbjct: 301  KYVFGVDDTLKALEMGAVETLIVWENLDISRYVLKNNITGEIVIKHLNKEQESNQSHFRD 360

Query: 789  AATNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 610
             AT+AELEVQEKMSLLEWFANEYK+FGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
Sbjct: 361  TATSAELEVQEKMSLLEWFANEYKRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 420

Query: 609  RTF 601
            R+F
Sbjct: 421  RSF 423


>ref|XP_004142086.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus]
          Length = 436

 Score =  768 bits (1983), Expect = 0.0
 Identities = 384/423 (90%), Positives = 405/423 (95%)
 Frame = -3

Query: 1869 MADAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 1690
            MADAHETDKN               ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1689 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1510
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1509 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG 1330
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1329 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS 1150
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INP+TSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1149 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEELSQDTG 970
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILS+VKFIQEKRLIGKYFEE+SQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 969  KYVFGVDDTLKALEMGAVEILIVWENLDMSRYVLKNNTTGEIIVKHLNKDQDAVQSHFRD 790
            KYVFGVDDTLKALEMGAVEILIVWENLD++RYVLKN  TGEII+KHLNK+Q+A QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNAATGEIIIKHLNKEQEANQSNFRD 360

Query: 789  AATNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 610
            +AT+AELEVQEKM+LLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  SATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 609  RTF 601
            R+F
Sbjct: 421  RSF 423


>ref|XP_004140563.1| PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like
            [Cucumis sativus] gi|449487371|ref|XP_004157593.1|
            PREDICTED: eukaryotic peptide chain release factor
            subunit 1-3-like [Cucumis sativus]
          Length = 436

 Score =  766 bits (1979), Expect = 0.0
 Identities = 383/423 (90%), Positives = 405/423 (95%)
 Frame = -3

Query: 1869 MADAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 1690
            MADAHETDKN               ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1689 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1510
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1509 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG 1330
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1329 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS 1150
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INP+TSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1149 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEELSQDTG 970
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILS+VKFIQEKRLIGKYFEE+SQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 969  KYVFGVDDTLKALEMGAVEILIVWENLDMSRYVLKNNTTGEIIVKHLNKDQDAVQSHFRD 790
            KYVFGVDDTLKALEMGAVEILIVWENLD++RYVLKN +TGEII+KHLNK+Q+A QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTGEIIIKHLNKEQEANQSNFRD 360

Query: 789  AATNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 610
             AT++ELEVQEKM+LLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  PATSSELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 609  RTF 601
            R+F
Sbjct: 421  RSF 423


>gb|ADN33689.1| eukaryotic peptide chain release factor subunit [Cucumis melo subsp.
            melo]
          Length = 436

 Score =  766 bits (1977), Expect = 0.0
 Identities = 382/423 (90%), Positives = 405/423 (95%)
 Frame = -3

Query: 1869 MADAHETDKNXXXXXXXXXXXXXXXARGNGTSMISLIMPPRDQISRVTKMLGDEYGTASN 1690
            MADAHETDKN               ARGNGTSMISLIMPPRDQISRVTKMLGDE+GTASN
Sbjct: 1    MADAHETDKNIEIWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASN 60

Query: 1689 IKSRVNRQSVLGAITSAQQRLKLYNRVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 1510
            IKSRVNRQSVLGAITSAQQRLKLYN+VPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN
Sbjct: 61   IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPIN 120

Query: 1509 ASLYLCDNKFHTEALNELLESDDKFGFIIMDGNGTLFGTLSGNTREILHKFSVDLPKKHG 1330
            ASLYLCDNKFHTEALNELLESDDKFGFI+MDGNGTLFGTLSGNTRE+LHKFSVDLPKKHG
Sbjct: 121  ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG 180

Query: 1329 RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPSTSQPNVSGLILAGSADFKTELSQS 1150
            RGGQSALRFARLRMEKRHNYVRKTAELATQF+INP+TSQPNV+GLILAGSADFKTELSQS
Sbjct: 181  RGGQSALRFARLRMEKRHNYVRKTAELATQFFINPATSQPNVAGLILAGSADFKTELSQS 240

Query: 1149 DMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSSVKFIQEKRLIGKYFEELSQDTG 970
            DMFDPRLQAKILNVVDVSYGGENGFNQAIELS+EILS+VKFIQEKRLIGKYFEE+SQDTG
Sbjct: 241  DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG 300

Query: 969  KYVFGVDDTLKALEMGAVEILIVWENLDMSRYVLKNNTTGEIIVKHLNKDQDAVQSHFRD 790
            KYVFGVDDTLKALEMGAVEILIVWENLD++RYVLKN +T EI++KHLNK+Q+A QS+FRD
Sbjct: 301  KYVFGVDDTLKALEMGAVEILIVWENLDINRYVLKNASTAEIVIKHLNKEQEANQSNFRD 360

Query: 789  AATNAELEVQEKMSLLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM 610
            +AT+AELEVQEKM+LLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLD+
Sbjct: 361  SATSAELEVQEKMALLEWFANEYKKFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDI 420

Query: 609  RTF 601
            R+F
Sbjct: 421  RSF 423


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