BLASTX nr result
ID: Bupleurum21_contig00005051
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00005051
(1312 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera] 407 e-111
ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containi... 406 e-111
ref|XP_002521980.1| pentatricopeptide repeat-containing protein,... 380 e-103
dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana] 380 e-103
ref|NP_566237.1| pentatricopeptide repeat-containing protein [Ar... 380 e-103
>emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 407 bits (1045), Expect = e-111
Identities = 197/272 (72%), Positives = 236/272 (86%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
LV EMFS GC+PN VTYSILISSLCR G++DEAI++LK+M+EK + PDTY++DPLISA+C
Sbjct: 309 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 368
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
KEG+LDLAIGIMDYMISNGCLPDIVNYNTIL+A+ KNG A+QALEIF +L GCPP+VS
Sbjct: 369 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 428
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YNTMISALW+ GDR+RAL +V MI+K IDPDEITYNSLISCLCRDG+V+EA+ LL DM
Sbjct: 429 SYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDM 488
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
E S F PTVI+YNIVLLGLCK RIDDAI + +EM++K RPNETTYILL+EGIGFAGW
Sbjct: 489 EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWR 548
Query: 592 AEAMELANSLLAIGLISKQSFRKLSRMFPLPD 497
EAMELANSL + +IS+ SF++L++ FP+ D
Sbjct: 549 TEAMELANSLFSRDVISQDSFKRLNKTFPMLD 580
Score = 159 bits (402), Expect = 2e-36
Identities = 83/254 (32%), Positives = 143/254 (56%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
++ M + G P++VTY+I+I SLC K+ A+ +L +L P T+ LI A
Sbjct: 169 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATI 228
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
EG ++ A+ +++ M++ G LPD+ YN I+ M K G ++A E+ L + GC PDV
Sbjct: 229 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVI 288
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YN ++ A N G +LV +M ++ +P+++TY+ LIS LCR G +DEA+ +L+ M
Sbjct: 289 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 348
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
+ +P +Y+ ++ LCK R+D AI ++ M+ P+ Y ++ + G
Sbjct: 349 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 408
Query: 592 AEAMELANSLLAIG 551
+A+E+ N L +G
Sbjct: 409 NQALEIFNKLRGMG 422
Score = 153 bits (386), Expect = 1e-34
Identities = 73/233 (31%), Positives = 131/233 (56%)
Frame = -1
Query: 1309 VREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCK 1130
V E+ +P+V Y+ +IS C+ +++ A +L M +G PD T++ +I ++C
Sbjct: 135 VMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 194
Query: 1129 EGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVST 950
KL LA+ ++D ++ + C+P ++ Y ++ A G ++A+++ E++ A G PD+ T
Sbjct: 195 RRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 254
Query: 949 YNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDME 770
YN +I + G RA EL+ + +K +PD I+YN L+ G DE +L+ +M
Sbjct: 255 YNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMF 314
Query: 769 SSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGI 611
S P +TY+I++ LC+ RID+AI VL M++K P+ +Y L+ +
Sbjct: 315 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 367
Score = 138 bits (348), Expect = 3e-30
Identities = 72/243 (29%), Positives = 133/243 (54%)
Frame = -1
Query: 1288 GCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLA 1109
G P+V+ + LI +++A ++++ LE PD + ++ +IS CK +++ A
Sbjct: 108 GYTPDVILCTKLIKGFFNFKNIEKASRVMEI-LESHTEPDVFAYNAVISGFCKVNQIEAA 166
Query: 1108 IGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISA 929
+++ M + G LPDIV YN ++ ++ K AL + +QL C P V TY +I A
Sbjct: 167 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEA 226
Query: 928 LWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPT 749
G A++L+++M+ + + PD TYN++I +C++GMV+ A EL+ + S P
Sbjct: 227 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPD 286
Query: 748 VITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELAN 569
VI+YNI+L + D+ ++++EM + PN+ TY +L+ + G EA+ +
Sbjct: 287 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLK 346
Query: 568 SLL 560
++
Sbjct: 347 VMI 349
Score = 112 bits (281), Expect = 2e-22
Identities = 64/235 (27%), Positives = 119/235 (50%)
Frame = -1
Query: 1255 LISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGIMDYMISNG 1076
L++ C+ GK +E++ L+ ++ KG PD LI ++ A +M+ + S+
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 142
Query: 1075 CLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWNSGDRTRAL 896
PD+ YN ++S K + + A ++ ++ A G PD+ TYN MI +L N AL
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 895 ELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVITYNIVLLGL 716
++ ++ + P ITY LI +G ++EAM+LL +M + P + TYN ++ G+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 262
Query: 715 CKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLLAIG 551
CK ++ A ++++ + K P+ +Y +L+ G E +L + + G
Sbjct: 263 CKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 317
Score = 89.0 bits (219), Expect = 2e-15
Identities = 50/167 (29%), Positives = 87/167 (52%)
Frame = -1
Query: 1045 ILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWNSGDRTRALELVQDMINKS 866
+L+ K GK +++L E L G PDV +I +N + +A V +++
Sbjct: 84 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESH 142
Query: 865 IDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVITYNIVLLGLCKAHRIDDAI 686
+PD YN++IS C+ ++ A ++L M++ F P ++TYNI++ LC ++ A+
Sbjct: 143 TEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 202
Query: 685 QVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLLAIGLI 545
VL +++ P TY +L+E G EAM+L +LA GL+
Sbjct: 203 TVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLL 249
>ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 406 bits (1044), Expect = e-111
Identities = 196/272 (72%), Positives = 236/272 (86%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
LV EMFS GC+PN VTYSILISSLCR G++DEAI++LK+M+EK + PDTY++DPLISA+C
Sbjct: 299 LVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALC 358
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
KEG+LDLAIGIMDYMISNGCLPDIVNYNTIL+A+ KNG A+QALEIF +L GCPP+VS
Sbjct: 359 KEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVS 418
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YNTMISALW+ GDR+RAL +V MI+K +DPDEITYNSLISCLCRDG+V+EA+ LL DM
Sbjct: 419 SYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDM 478
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
E S F PTVI+YNIVLLGLCK RIDDAI + +EM++K RPNETTYILL+EGIGFAGW
Sbjct: 479 EQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWR 538
Query: 592 AEAMELANSLLAIGLISKQSFRKLSRMFPLPD 497
EAMELANSL + +IS+ SF++L++ FP+ D
Sbjct: 539 TEAMELANSLFSRDVISQDSFKRLNKTFPMLD 570
Score = 159 bits (402), Expect = 2e-36
Identities = 83/254 (32%), Positives = 143/254 (56%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
++ M + G P++VTY+I+I SLC K+ A+ +L +L P T+ LI A
Sbjct: 159 VLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATI 218
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
EG ++ A+ +++ M++ G LPD+ YN I+ M K G ++A E+ L + GC PDV
Sbjct: 219 VEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVI 278
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YN ++ A N G +LV +M ++ +P+++TY+ LIS LCR G +DEA+ +L+ M
Sbjct: 279 SYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVM 338
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
+ +P +Y+ ++ LCK R+D AI ++ M+ P+ Y ++ + G
Sbjct: 339 IEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNA 398
Query: 592 AEAMELANSLLAIG 551
+A+E+ N L +G
Sbjct: 399 NQALEIFNKLRGMG 412
Score = 152 bits (384), Expect = 2e-34
Identities = 73/233 (31%), Positives = 130/233 (55%)
Frame = -1
Query: 1309 VREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCK 1130
V E+ +P+V Y+ +IS C+ +++ A +L M +G PD T++ +I ++C
Sbjct: 125 VMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCN 184
Query: 1129 EGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVST 950
KL LA+ ++D ++ + C+P ++ Y ++ A G ++A+++ E++ A G PD+ T
Sbjct: 185 RRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYT 244
Query: 949 YNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDME 770
YN +I + G RA EL+ + +K PD I+YN L+ G DE +L+ +M
Sbjct: 245 YNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMF 304
Query: 769 SSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGI 611
S P +TY+I++ LC+ RID+AI VL M++K P+ +Y L+ +
Sbjct: 305 SRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISAL 357
Score = 139 bits (351), Expect = 1e-30
Identities = 72/243 (29%), Positives = 134/243 (55%)
Frame = -1
Query: 1288 GCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLA 1109
G P+V+ + LI +++A ++++ LE PD + ++ +IS CK +++ A
Sbjct: 98 GYTPDVILCTKLIKGFFNFKNIEKASRVMEI-LESHTEPDVFAYNAVISGFCKVNRIEAA 156
Query: 1108 IGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISA 929
+++ M + G LPDIV YN ++ ++ K AL++ +QL C P V TY +I A
Sbjct: 157 TQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEA 216
Query: 928 LWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPT 749
G A++L+++M+ + + PD TYN++I +C++GMV+ A EL+ + S P
Sbjct: 217 TIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPD 276
Query: 748 VITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELAN 569
VI+YNI+L + D+ ++++EM + PN+ TY +L+ + G EA+ +
Sbjct: 277 VISYNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLK 336
Query: 568 SLL 560
++
Sbjct: 337 VMI 339
Score = 114 bits (286), Expect = 4e-23
Identities = 64/235 (27%), Positives = 121/235 (51%)
Frame = -1
Query: 1255 LISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGIMDYMISNG 1076
L++ C+ GK +E++ L+ ++ KG PD LI ++ A +M+ + S+
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESH- 132
Query: 1075 CLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWNSGDRTRAL 896
PD+ YN ++S K + + A ++ ++ A G PD+ TYN MI +L N AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 895 ELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVITYNIVLLGL 716
+++ ++ + P ITY LI +G ++EAM+LL +M + P + TYN ++ G+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252
Query: 715 CKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLLAIG 551
CK ++ A ++++ + K +P+ +Y +L+ G E +L + + G
Sbjct: 253 CKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRG 307
Score = 89.4 bits (220), Expect = 2e-15
Identities = 50/167 (29%), Positives = 88/167 (52%)
Frame = -1
Query: 1045 ILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWNSGDRTRALELVQDMINKS 866
+L+ K GK +++L E L G PDV +I +N + +A V +++
Sbjct: 74 LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASR-VMEILESH 132
Query: 865 IDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVITYNIVLLGLCKAHRIDDAI 686
+PD YN++IS C+ ++ A ++L M++ F P ++TYNI++ LC ++ A+
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192
Query: 685 QVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLLAIGLI 545
+VL +++ P TY +L+E G EAM+L +LA GL+
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLL 239
>ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223538784|gb|EEF40384.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 584
Score = 380 bits (977), Expect = e-103
Identities = 178/272 (65%), Positives = 227/272 (83%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
L+ EM SIGC PNVVT+SILI +LCRDGKV+EA+NLL+ M EKG+ PD Y +DPLI+ C
Sbjct: 300 LISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFC 359
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
+EG+LDLA ++YMIS+GCLPDIVNYNTI++ + + GKADQALE+FE+L GCPP+VS
Sbjct: 360 REGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVS 419
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YNT+ SALW+SGDR RALE++ ++N+ IDPDEITYNSLISCLCRDGMVDEA+ELL DM
Sbjct: 420 SYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDM 479
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
+S ++ P V++YNI+LLGLCK +R +DAI+VL+ M +K +PNETTYILL+EGIGF+G
Sbjct: 480 QSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLR 539
Query: 592 AEAMELANSLLAIGLISKQSFRKLSRMFPLPD 497
AEAMELANSL + IS+ SF +L++ FPL D
Sbjct: 540 AEAMELANSLHGMNAISEDSFNRLNKTFPLLD 571
Score = 171 bits (433), Expect = 4e-40
Identities = 85/255 (33%), Positives = 141/255 (55%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
+ E+ C+P V+TY+ILI + DG +D A+ LL ML KG+ PDT T++ +I +C
Sbjct: 195 IFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMC 254
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
KE +D A ++ + S GC PDI+ YN +L + GK + ++ ++ + GC P+V
Sbjct: 255 KEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVV 314
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
T++ +I L G A+ L++ M K + PD Y+ LI+ CR+G +D A E L M
Sbjct: 315 THSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYM 374
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
S P ++ YN ++ GLC+ + D A++V ++ + PN ++Y L + +G
Sbjct: 375 ISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDR 434
Query: 592 AEAMELANSLLAIGL 548
A+E+ LL G+
Sbjct: 435 YRALEMILKLLNQGI 449
Score = 164 bits (415), Expect = 5e-38
Identities = 85/250 (34%), Positives = 139/250 (55%)
Frame = -1
Query: 1300 MFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGK 1121
M S G P+VVTY+I+I S C GK+D A+ + + +L+ P T+ LI A +G
Sbjct: 164 MKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGG 223
Query: 1120 LDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNT 941
+D+A+ ++D M+S G PD + YN I+ M K D+A E+ L++ GC PD+ TYN
Sbjct: 224 IDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNI 283
Query: 940 MISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSK 761
++ L + G + +L+ +MI+ P+ +T++ LI LCRDG V+EA+ LLR M+
Sbjct: 284 LLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG 343
Query: 760 FSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAM 581
P Y+ ++ G C+ R+D A + L M+ P+ Y ++ G+ G +A+
Sbjct: 344 LKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQAL 403
Query: 580 ELANSLLAIG 551
E+ L +G
Sbjct: 404 EVFEKLDEVG 413
Score = 155 bits (393), Expect = 2e-35
Identities = 87/251 (34%), Positives = 141/251 (56%)
Frame = -1
Query: 1300 MFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGK 1121
M G P+V+ + LI + +A ++++ LE+ PD + ++ LIS K +
Sbjct: 95 MVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEI-LERYGKPDVFAYNALISGFIKANQ 153
Query: 1120 LDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNT 941
L+ A ++D M S G LPD+V YN ++ + GK D ALEIFE+L C P V TY
Sbjct: 154 LENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTI 213
Query: 940 MISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSK 761
+I A G A++L+ +M++K ++PD +TYN++I +C++ MVD+A ELLR + S
Sbjct: 214 LIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRG 273
Query: 760 FSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAM 581
P +ITYNI+L L + + +++SEM+ +PN T+ +L+ + G EA+
Sbjct: 274 CKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAV 333
Query: 580 ELANSLLAIGL 548
L S+ GL
Sbjct: 334 NLLRSMKEKGL 344
>dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 380 bits (975), Expect = e-103
Identities = 181/270 (67%), Positives = 224/270 (82%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
L+ +MFS CDPNVVTYSILI++LCRDGK++EA+NLLKLM EKG+ PD Y++DPLI+A C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
+EG+LD+AI ++ MIS+GCLPDIVNYNT+L+ + KNGKADQALEIF +L GC P+ S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YNTM SALW+SGD+ RAL ++ +M++ IDPDEITYNS+ISCLCR+GMVDEA ELL DM
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
S +F P+V+TYNIVLLG CKAHRI+DAI VL MV RPNETTY +L+EGIGFAG+
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 592 AEAMELANSLLAIGLISKQSFRKLSRMFPL 503
AEAMELAN L+ I IS+ SF++L R FPL
Sbjct: 560 AEAMELANDLVRIDAISEYSFKRLHRTFPL 589
Score = 165 bits (417), Expect = 3e-38
Identities = 87/243 (35%), Positives = 135/243 (55%)
Frame = -1
Query: 1279 PNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGI 1100
P+ VTY+I+I SLC GK+D A+ +L +L P T+ LI A EG +D A+ +
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 1099 MDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWN 920
MD M+S G PD+ YNTI+ M K G D+A E+ L G PDV +YN ++ AL N
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLN 310
Query: 919 SGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVIT 740
G +L+ M ++ DP+ +TY+ LI+ LCRDG ++EAM LL+ M+ +P +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 739 YNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLL 560
Y+ ++ C+ R+D AI+ L M+ P+ Y ++ + G +A+E+ L
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 559 AIG 551
+G
Sbjct: 431 EVG 433
Score = 161 bits (407), Expect = 4e-37
Identities = 78/245 (31%), Positives = 143/245 (58%)
Frame = -1
Query: 1279 PNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGI 1100
P+V Y+ LI+ C+ ++D+A +L M K +PDT T++ +I ++C GKLDLA+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 1099 MDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWN 920
++ ++S+ C P ++ Y ++ A G D+AL++ +++ + G PD+ TYNT+I +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 919 SGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVIT 740
G RA E+V+++ K +PD I+YN L+ L G +E +L+ M S K P V+T
Sbjct: 276 EGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 739 YNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLL 560
Y+I++ LC+ +I++A+ +L M +K P+ +Y L+ G A+E +++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 559 AIGLI 545
+ G +
Sbjct: 396 SDGCL 400
Score = 152 bits (384), Expect = 2e-34
Identities = 82/255 (32%), Positives = 142/255 (55%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
L+ M G +P+V+ + LI + +A+ ++++ LEK PD + ++ LI+ C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEI-LEKFGQPDVFAYNALINGFC 169
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
K ++D A ++D M S PD V YN ++ ++ GK D AL++ QL + C P V
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
TY +I A G AL+L+ +M+++ + PD TYN++I +C++GMVD A E++R++
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
E P VI+YNI+L L + ++ +++++M ++ PN TY +L+ + G
Sbjct: 290 ELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 592 AEAMELANSLLAIGL 548
EAM L + GL
Sbjct: 350 EEAMNLLKLMKEKGL 364
>ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein
[Arabidopsis thaliana] gi|15810359|gb|AAL07067.1| unknown
protein [Arabidopsis thaliana] gi|22136960|gb|AAM91709.1|
unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 380 bits (975), Expect = e-103
Identities = 181/270 (67%), Positives = 224/270 (82%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
L+ +MFS CDPNVVTYSILI++LCRDGK++EA+NLLKLM EKG+ PD Y++DPLI+A C
Sbjct: 320 LMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFC 379
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
+EG+LD+AI ++ MIS+GCLPDIVNYNT+L+ + KNGKADQALEIF +L GC P+ S
Sbjct: 380 REGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSS 439
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
+YNTM SALW+SGD+ RAL ++ +M++ IDPDEITYNS+ISCLCR+GMVDEA ELL DM
Sbjct: 440 SYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDM 499
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
S +F P+V+TYNIVLLG CKAHRI+DAI VL MV RPNETTY +L+EGIGFAG+
Sbjct: 500 RSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYR 559
Query: 592 AEAMELANSLLAIGLISKQSFRKLSRMFPL 503
AEAMELAN L+ I IS+ SF++L R FPL
Sbjct: 560 AEAMELANDLVRIDAISEYSFKRLHRTFPL 589
Score = 169 bits (427), Expect = 2e-39
Identities = 88/243 (36%), Positives = 136/243 (55%)
Frame = -1
Query: 1279 PNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGI 1100
P+ VTY+I+I SLC GK+D A+ +L +L P T+ LI A EG +D A+ +
Sbjct: 191 PDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKL 250
Query: 1099 MDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWN 920
MD M+S G PD+ YNTI+ M K G D+A E+ L GC PDV +YN ++ AL N
Sbjct: 251 MDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLN 310
Query: 919 SGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVIT 740
G +L+ M ++ DP+ +TY+ LI+ LCRDG ++EAM LL+ M+ +P +
Sbjct: 311 QGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYS 370
Query: 739 YNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLL 560
Y+ ++ C+ R+D AI+ L M+ P+ Y ++ + G +A+E+ L
Sbjct: 371 YDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLG 430
Query: 559 AIG 551
+G
Sbjct: 431 EVG 433
Score = 161 bits (408), Expect = 3e-37
Identities = 78/245 (31%), Positives = 143/245 (58%)
Frame = -1
Query: 1279 PNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVCKEGKLDLAIGI 1100
P+V Y+ LI+ C+ ++D+A +L M K +PDT T++ +I ++C GKLDLA+ +
Sbjct: 156 PDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKV 215
Query: 1099 MDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVSTYNTMISALWN 920
++ ++S+ C P ++ Y ++ A G D+AL++ +++ + G PD+ TYNT+I +
Sbjct: 216 LNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCK 275
Query: 919 SGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDMESSKFSPTVIT 740
G RA E+V+++ K +PD I+YN L+ L G +E +L+ M S K P V+T
Sbjct: 276 EGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVT 335
Query: 739 YNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWHAEAMELANSLL 560
Y+I++ LC+ +I++A+ +L M +K P+ +Y L+ G A+E +++
Sbjct: 336 YSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMI 395
Query: 559 AIGLI 545
+ G +
Sbjct: 396 SDGCL 400
Score = 152 bits (384), Expect = 2e-34
Identities = 82/255 (32%), Positives = 142/255 (55%)
Frame = -1
Query: 1312 LVREMFSIGCDPNVVTYSILISSLCRDGKVDEAINLLKLMLEKGINPDTYTFDPLISAVC 1133
L+ M G +P+V+ + LI + +A+ ++++ LEK PD + ++ LI+ C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEI-LEKFGQPDVFAYNALINGFC 169
Query: 1132 KEGKLDLAIGIMDYMISNGCLPDIVNYNTILSAMSKNGKADQALEIFEQLAATGCPPDVS 953
K ++D A ++D M S PD V YN ++ ++ GK D AL++ QL + C P V
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229
Query: 952 TYNTMISALWNSGDRTRALELVQDMINKSIDPDEITYNSLISCLCRDGMVDEAMELLRDM 773
TY +I A G AL+L+ +M+++ + PD TYN++I +C++GMVD A E++R++
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289
Query: 772 ESSKFSPTVITYNIVLLGLCKAHRIDDAIQVLSEMVKKRYRPNETTYILLVEGIGFAGWH 593
E P VI+YNI+L L + ++ +++++M ++ PN TY +L+ + G
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKI 349
Query: 592 AEAMELANSLLAIGL 548
EAM L + GL
Sbjct: 350 EEAMNLLKLMKEKGL 364