BLASTX nr result

ID: Bupleurum21_contig00005042 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005042
         (1706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...   319   1e-84
emb|CBI20569.3| unnamed protein product [Vitis vinifera]              308   2e-81
ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vini...   305   2e-80
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...   304   4e-80
ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus c...   295   3e-77

>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
            predicted protein [Populus trichocarpa]
          Length = 542

 Score =  319 bits (818), Expect = 1e-84
 Identities = 182/373 (48%), Positives = 229/373 (61%), Gaps = 22/373 (5%)
 Frame = +1

Query: 16   DRILERERHQMXXXXXXXXXXXXXXXXXXXXXXXXTNYH-FGGASVSAEYAYDPCLASLH 192
            DRILE ERHQ+                         +     GA  S ++ ++ CLASLH
Sbjct: 5    DRILEAERHQIEQIRQLDFEELQVEEVDDDDSDSSLDDRDASGAGSSDDFTFNTCLASLH 64

Query: 193  TYLGEVEDTRSRMAFLDGGALLNLPLFYLEGVVLFPEATLPLRVIQPNFIAGLQRAIKQA 372
            TYLGEVEDT  R+AFLDGGA+LNLPLFYLEGVVLFPEATLPLRVIQPNFI+ ++RA+ Q 
Sbjct: 65   TYLGEVEDTHHRLAFLDGGAILNLPLFYLEGVVLFPEATLPLRVIQPNFISAVERALVQV 124

Query: 373  DAPYTLGVVRVYRDTDNGRLRFATTGTTAEIRQFRRLEDGSLNVVTXXXXXXXXXXXWID 552
            DAPYT+GVVR YRD+DN RLRFAT GTTAEIRQ+RRLEDGSLNVVT           WID
Sbjct: 125  DAPYTVGVVRAYRDSDNRRLRFATVGTTAEIRQYRRLEDGSLNVVTRGQQRFRLKRRWID 184

Query: 553  VEGAPCGEIQIIQEDSPLRTPKDAVGRLSTVRNL-----STICGLEARRHVHRNEGGDSD 717
            VEG PCGE+QIIQED PLRTPKDA G+L+ + NL     S++         + +   DS+
Sbjct: 185  VEGVPCGEVQIIQEDMPLRTPKDAFGKLAPLSNLRSHKFSSVLPSTFSSVGYGHSDNDSE 244

Query: 718  TLSEDSFSSEPFLTERRLSESTLASSYCGSV---STSGEDENFGSESDH---------QS 861
              SE+SF +E  L ERR+ +S L S Y   +   S S +D+ F S S+          ++
Sbjct: 245  ANSEESFETELSLAERRIHQSALNSCYGYDMMDESMSSDDDKFMSRSEEMRSRRSHLSET 304

Query: 862  GGSLHSDDNNKGENASMETGDVVVSDRQLRHNVG----WEKNSVSKLKEVSSAFWPNWVY 1029
             GSL+ D      N ++E G+   S   ++   G    W+   +++ + V   FWP WVY
Sbjct: 305  EGSLYLDTGKNLGNTTLEIGN---SSGLVKKGEGSKRCWKNTDLNQFRRVPRTFWPYWVY 361

Query: 1030 RMYDSYHLAQQVA 1068
             MYDSY LA++ A
Sbjct: 362  SMYDSYCLAEKAA 374


>emb|CBI20569.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  308 bits (790), Expect = 2e-81
 Identities = 181/378 (47%), Positives = 229/378 (60%), Gaps = 26/378 (6%)
 Frame = +1

Query: 16   DRILERERHQMXXXXXXXXXXXXXXXXXXXXXXXX---TNYHFGGASVSAEYAYDPCLAS 186
            D +LERER+Q+                           T++ + GA+ S+E+ +D CLAS
Sbjct: 4    DSLLERERYQIQQIRELEFEELQIEEVDDLNESDDDAATDHGYRGAASSSEFTFDTCLAS 63

Query: 187  LHTYLGEVEDTRSRMAFLDGGALLNLPLFYLEGVVLFPEATLPLRVIQPNFIAGLQRAIK 366
            LHTYLGEVEDT  R+AFLDGGA+  LPLFYLEG VLFPEATLPLRVI+ NF+A +++A+ 
Sbjct: 64   LHTYLGEVEDTHHRLAFLDGGAVWALPLFYLEGAVLFPEATLPLRVIKSNFVAAVEKALH 123

Query: 367  QADAPYTLGVVRVYRDTDNGRLRFATTGTTAEIRQFRRLEDGSLNVVTXXXXXXXXXXXW 546
            QADAPYT+GVV V RD D+GR+RF+T GTTAEIRQ+RRLED SLNVVT           W
Sbjct: 124  QADAPYTIGVVHVERDPDSGRIRFSTIGTTAEIRQYRRLEDHSLNVVTRGQQRFHLRRGW 183

Query: 547  IDVEGAPCGEIQIIQEDSPLRTPKDAVGRLSTVRNLSTICGLEARR----HVHRNEGGDS 714
            ID +G P GE+QIIQED PLRTP+DA G+L+ + NL +       +    H  R   GD 
Sbjct: 184  IDDDGVPYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHTSQSNTSHAKRPRYGDK 243

Query: 715  DTL----SEDSFSSEPFLTERRLSESTLASSYCGSV---STSGEDENFGSESDHQSG--- 864
            D+     SE+SF SE  L E R+  S + S Y       STS +D+ F  ES+ Q G   
Sbjct: 244  DSASESNSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSDDDKFVCESELQLGRSH 303

Query: 865  -----GSLHSDDNNKGENASMETGDVVVSDRQLRHNVGW-EKNSVSKLKE---VSSAFWP 1017
                 GS+H D   + + A++   +  +S  Q     G  E   V+KL +   V  AFWP
Sbjct: 304  LNEPIGSMHLDCERRNKKANLGIRNKSISGSQSCKGKGLKEGQMVTKLNQSYGVPRAFWP 363

Query: 1018 NWVYRMYDSYHLAQQVAG 1071
             WVYRMYDSYHLAQ+ AG
Sbjct: 364  YWVYRMYDSYHLAQRAAG 381


>ref|XP_002277719.2| PREDICTED: protein cereblon-like [Vitis vinifera]
          Length = 543

 Score =  305 bits (782), Expect = 2e-80
 Identities = 173/334 (51%), Positives = 215/334 (64%), Gaps = 23/334 (6%)
 Frame = +1

Query: 139  GASVSAEYAYDPCLASLHTYLGEVEDTRSRMAFLDGGALLNLPLFYLEGVVLFPEATLPL 318
            GA+ S+E+ +D CLASLHTYLGEVEDT  R+AFLDGGA+  LPLFYLEG VLFPEATLPL
Sbjct: 43   GAASSSEFTFDTCLASLHTYLGEVEDTHHRLAFLDGGAVWALPLFYLEGAVLFPEATLPL 102

Query: 319  RVIQPNFIAGLQRAIKQADAPYTLGVVRVYRDTDNGRLRFATTGTTAEIRQFRRLEDGSL 498
            RVI+ NF+A +++A+ QADAPYT+GVV V RD D+GR+RF+T GTTAEIRQ+RRLED SL
Sbjct: 103  RVIKSNFVAAVEKALHQADAPYTIGVVHVERDPDSGRIRFSTIGTTAEIRQYRRLEDHSL 162

Query: 499  NVVTXXXXXXXXXXXWIDVEGAPCGEIQIIQEDSPLRTPKDAVGRLSTVRNLSTICGLEA 678
            NVVT           WID +G P GE+QIIQED PLRTP+DA G+L+ + NL +      
Sbjct: 163  NVVTRGQQRFHLRRGWIDDDGVPYGEVQIIQEDLPLRTPRDAFGKLAPLSNLRSFSHPHT 222

Query: 679  RR----HVHRNEGGDSDTL----SEDSFSSEPFLTERRLSESTLASSYCGSV---STSGE 825
             +    H  R   GD D+     SE+SF SE  L E R+  S + S Y       STS +
Sbjct: 223  SQSNTSHAKRPRYGDKDSASESNSEESFDSELSLAEMRMHRSAIDSCYGYDTIDESTSSD 282

Query: 826  DENFGSESDHQSG--------GSLHSDDNNKGENASMETGDVVVSDRQLRHNVGW-EKNS 978
            D+ F  ES+ Q G        GS+H D   + + A++   +  +S  Q     G  E   
Sbjct: 283  DDKFVCESELQLGRSHLNEPIGSMHLDCERRNKKANLGIRNKSISGSQSCKGKGLKEGQM 342

Query: 979  VSKLKE---VSSAFWPNWVYRMYDSYHLAQQVAG 1071
            V+KL +   V  AFWP WVYRMYDSYHLAQ+ AG
Sbjct: 343  VTKLNQSYGVPRAFWPYWVYRMYDSYHLAQRAAG 376


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
            predicted protein [Populus trichocarpa]
          Length = 549

 Score =  304 bits (779), Expect = 4e-80
 Identities = 169/328 (51%), Positives = 214/328 (65%), Gaps = 18/328 (5%)
 Frame = +1

Query: 139  GASVSAEYAYDPCLASLHTYLGEVEDTRSRMAFLDGGALLNLPLFYLEGVVLFPEATLPL 318
            GA  S ++ ++PCLASLHTYLGEVEDT  R+AFLDGGA+LNLPLFYLEGVVLFPEATLPL
Sbjct: 35   GAGSSDDFTFNPCLASLHTYLGEVEDTHHRLAFLDGGAVLNLPLFYLEGVVLFPEATLPL 94

Query: 319  RVIQPNFIAGLQRAIKQADAPYTLGVVRVYR--DTDNGRLRFATTGTTAEIRQFRRLEDG 492
            RV+QPNFI+ ++RA+ Q D P+ +GVVR YR  D+DN +LRFAT GTTAEIRQ+RRLEDG
Sbjct: 95   RVVQPNFISAVERALVQVDNPFIVGVVRAYRGSDSDNRQLRFATVGTTAEIRQYRRLEDG 154

Query: 493  SLNVVTXXXXXXXXXXXWIDVEGAPCGEIQIIQEDSPLRTPKDAVGRLSTVRNL-STICG 669
            SLNVVT           WIDVEG PCGE+QIIQED PLRTPKDA G+L+ + NL S    
Sbjct: 155  SLNVVTRGQQRFHLKHRWIDVEGMPCGEVQIIQEDIPLRTPKDAFGKLAPLSNLRSHRLS 214

Query: 670  LEARRHVHRNEGGDSDTLSEDSFSSEPFLTERRLSESTLASSYCGSV---STSGEDENFG 840
                   + +   DS+  S+DSF +       R  +S L S Y   V   STS +D+ F 
Sbjct: 215  RVLPSLGYGHSDNDSEANSDDSFENALSSAGMRTHQSALDSCYGYDVMDESTSSDDDKFL 274

Query: 841  SESD--------HQSGGSLHSDDNNKGENASMETGDVVVSDRQLRHNVG----WEKNSVS 984
            S+++        ++S G L+SD     +N ++E G+   S    +   G    W+   ++
Sbjct: 275  SQTEMRSTRSHLNESKGPLYSDTGKNADNTTLEIGN---SSDLAKKGEGSKRCWKNTDLN 331

Query: 985  KLKEVSSAFWPNWVYRMYDSYHLAQQVA 1068
                V  AFWP+WVYRMYDSY LA++ A
Sbjct: 332  HFHRVPRAFWPHWVYRMYDSYCLAERAA 359


>ref|XP_002516527.1| ATP-dependent peptidase, putative [Ricinus communis]
            gi|223544347|gb|EEF45868.1| ATP-dependent peptidase,
            putative [Ricinus communis]
          Length = 550

 Score =  295 bits (754), Expect = 3e-77
 Identities = 163/338 (48%), Positives = 210/338 (62%), Gaps = 28/338 (8%)
 Frame = +1

Query: 139  GASVSAEYAYDPCLASLHTYLGEVEDTRSRMAFLDGGALLNLPLFYLEGVVLFPEATLPL 318
            GA+ S E+A++ CLA LHTYLGEVEDT  R +FL+GGA+L LPLFYLEGVVLFP A LPL
Sbjct: 46   GATSSGEFAFNTCLAPLHTYLGEVEDTHRRFSFLEGGAVLTLPLFYLEGVVLFPGAILPL 105

Query: 319  RVIQPNFIAGLQRAIKQADAPYTLGVVRVYRDTDNGRLRFATTGTTAEIRQFRRLEDGSL 498
            RVIQPNFI+ ++RA+ Q DAP+T+GVVR YRD DNGRLRFAT GTTAEIRQ+RRLEDGSL
Sbjct: 106  RVIQPNFISAVERALTQVDAPHTIGVVRAYRDRDNGRLRFATIGTTAEIRQYRRLEDGSL 165

Query: 499  NVVTXXXXXXXXXXXWIDVEGAPCGEIQIIQEDSPLRTPKDAVGRLSTVRNLSTICGLEA 678
            NVVT           WIDVEG PCG++QIIQED PLR+P+ A G++  +R L +    +A
Sbjct: 166  NVVTRGQQRFRLRRRWIDVEGVPCGKVQIIQEDLPLRSPQGAFGKIKPLRTLDSRNVSDA 225

Query: 679  -------------RRHVHRNEGGDSDTLSEDSFSSEPFLTERRLSESTLASSYCGSVS-- 813
                             H ++  DS+  SE+SF SE    ERR+ +S ++S     +   
Sbjct: 226  VPSSASYTVPSNISSDAHGDDDNDSEANSEESFESELSPAERRIHQSAISSCCSHDMMDD 285

Query: 814  -TSGEDENFGSE--------SDHQSGGSLHSDDNNKGENASMETGDVVVSDRQLRHNVG- 963
              S +D  F S+        +D  S  SLH +   + +   + T       +Q     G 
Sbjct: 286  LASSDDGKFDSQIKVTRSHLADSDSNESLHLNHEREMDKTVLAT-VYFTPKKQCHKGEGS 344

Query: 964  ---WEKNSVSKLKEVSSAFWPNWVYRMYDSYHLAQQVA 1068
               W+   +S+ + V +AFWP WVYRMYDSY LA++ A
Sbjct: 345  KSCWKNTDLSQFRRVPTAFWPFWVYRMYDSYCLAERAA 382


Top