BLASTX nr result

ID: Bupleurum21_contig00005032 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005032
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q41228.1|PSAEA_NICSY RecName: Full=Photosystem I reaction cen...    64   1e-08
gb|AEC11063.1| photosystem I reaction center subunit iv b [Camel...    64   1e-08
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...    64   1e-08
gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK...    64   1e-08
gb|ABK94240.1| unknown [Populus trichocarpa]                           64   1e-08

>sp|Q41228.1|PSAEA_NICSY RecName: Full=Photosystem I reaction center subunit IV A,
           chloroplastic; Short=PSI-E A; Contains: RecName:
           Full=Photosystem I reaction center subunit IV A isoform
           2; Flags: Precursor gi|632722|gb|AAB31704.1| photosystem
           I subunit PSI-E [Nicotiana sylvestris]
          Length = 141

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 506 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 417
           RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct: 112 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 141


>gb|AEC11063.1| photosystem I reaction center subunit iv b [Camellia sinensis]
          Length = 99

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 506 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 417
           RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct: 57  RYPVVVRFNKVNYANVSTNNYALDEIEEVK 86


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 506 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 417
           RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct: 111 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 140


>gb|ACJ84185.1| unknown [Medicago truncatula] gi|388516619|gb|AFK46371.1| unknown
           [Medicago truncatula]
          Length = 138

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 506 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 417
           RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct: 109 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 138


>gb|ABK94240.1| unknown [Populus trichocarpa]
          Length = 110

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 30/30 (100%), Positives = 30/30 (100%)
 Frame = -3

Query: 506 RYPVVVRFNKVNYANVSTNNYALDEIEEVK 417
           RYPVVVRFNKVNYANVSTNNYALDEIEEVK
Sbjct: 81  RYPVVVRFNKVNYANVSTNNYALDEIEEVK 110


Top