BLASTX nr result

ID: Bupleurum21_contig00005026 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005026
         (574 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ38371.1| HMG-protein [Plantago major]                           93   3e-17
ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l...    90   3e-16
gb|AFK49192.1| unknown [Lotus japonicus]                               89   4e-16
ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycin...    89   7e-16
gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]               88   1e-15

>emb|CAJ38371.1| HMG-protein [Plantago major]
          Length = 212

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 46/68 (67%), Positives = 50/68 (73%)
 Frame = +3

Query: 72  SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251
           SAFFVFLEEFR+TFKKENP +KAVSAVGKAGGEKWKSLT                EY+KL
Sbjct: 104 SAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKL 163

Query: 252 ITAYNKKQ 275
           + AYNKKQ
Sbjct: 164 MNAYNKKQ 171


>ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera]
           gi|147815135|emb|CAN74566.1| hypothetical protein
           VITISV_023651 [Vitis vinifera]
           gi|297740214|emb|CBI30396.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 44/68 (64%), Positives = 49/68 (72%)
 Frame = +3

Query: 72  SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251
           SAFFVFLEEFRK FKKENP VKAVSAVGKAGGE+WKSL+                EY+K+
Sbjct: 61  SAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKI 120

Query: 252 ITAYNKKQ 275
           + AYNKKQ
Sbjct: 121 MNAYNKKQ 128


>gb|AFK49192.1| unknown [Lotus japonicus]
          Length = 173

 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 45/68 (66%), Positives = 47/68 (69%)
 Frame = +3

Query: 72  SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251
           SAFFVFLE+FRKTFK ENP VK VSAVGKAGGEKWKSLT                EY+KL
Sbjct: 55  SAFFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKL 114

Query: 252 ITAYNKKQ 275
           I AYN KQ
Sbjct: 115 INAYNNKQ 122


>ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max]
           gi|255625939|gb|ACU13314.1| unknown [Glycine max]
          Length = 166

 Score = 88.6 bits (218), Expect = 7e-16
 Identities = 45/68 (66%), Positives = 48/68 (70%)
 Frame = +3

Query: 72  SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251
           SAFFVFLEEFRKTFK ENP VKAVS VGKAGGEKWKSL+                EY+KL
Sbjct: 58  SAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKL 117

Query: 252 ITAYNKKQ 275
           I AY+KKQ
Sbjct: 118 IKAYDKKQ 125


>gb|AEV43366.1| group B HMG-box protein [Citrus sinensis]
          Length = 165

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 44/68 (64%), Positives = 50/68 (73%)
 Frame = +3

Query: 72  SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251
           SAFFVFLEEFRK +K+E+P VKAVSAVGKAGGEKWKSLT                +Y+KL
Sbjct: 61  SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120

Query: 252 ITAYNKKQ 275
           +TAYNKKQ
Sbjct: 121 MTAYNKKQ 128