BLASTX nr result
ID: Bupleurum21_contig00005026
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00005026 (574 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAJ38371.1| HMG-protein [Plantago major] 93 3e-17 ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-l... 90 3e-16 gb|AFK49192.1| unknown [Lotus japonicus] 89 4e-16 ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycin... 89 7e-16 gb|AEV43366.1| group B HMG-box protein [Citrus sinensis] 88 1e-15 >emb|CAJ38371.1| HMG-protein [Plantago major] Length = 212 Score = 93.2 bits (230), Expect = 3e-17 Identities = 46/68 (67%), Positives = 50/68 (73%) Frame = +3 Query: 72 SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251 SAFFVFLEEFR+TFKKENP +KAVSAVGKAGGEKWKSLT EY+KL Sbjct: 104 SAFFVFLEEFRQTFKKENPNIKAVSAVGKAGGEKWKSLTDAEKAPYEAKAAKRKSEYEKL 163 Query: 252 ITAYNKKQ 275 + AYNKKQ Sbjct: 164 MNAYNKKQ 171 >ref|XP_002279947.2| PREDICTED: high mobility group B protein 1-like [Vitis vinifera] gi|147815135|emb|CAN74566.1| hypothetical protein VITISV_023651 [Vitis vinifera] gi|297740214|emb|CBI30396.3| unnamed protein product [Vitis vinifera] Length = 168 Score = 89.7 bits (221), Expect = 3e-16 Identities = 44/68 (64%), Positives = 49/68 (72%) Frame = +3 Query: 72 SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251 SAFFVFLEEFRK FKKENP VKAVSAVGKAGGE+WKSL+ EY+K+ Sbjct: 61 SAFFVFLEEFRKVFKKENPNVKAVSAVGKAGGERWKSLSEAEKAPYEAKAAKKKAEYEKI 120 Query: 252 ITAYNKKQ 275 + AYNKKQ Sbjct: 121 MNAYNKKQ 128 >gb|AFK49192.1| unknown [Lotus japonicus] Length = 173 Score = 89.4 bits (220), Expect = 4e-16 Identities = 45/68 (66%), Positives = 47/68 (69%) Frame = +3 Query: 72 SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251 SAFFVFLE+FRKTFK ENP VK VSAVGKAGGEKWKSLT EY+KL Sbjct: 55 SAFFVFLEDFRKTFKAENPNVKGVSAVGKAGGEKWKSLTKAEKAPYEAKAAKRKAEYEKL 114 Query: 252 ITAYNKKQ 275 I AYN KQ Sbjct: 115 INAYNNKQ 122 >ref|NP_001238631.1| uncharacterized protein LOC100499704 [Glycine max] gi|255625939|gb|ACU13314.1| unknown [Glycine max] Length = 166 Score = 88.6 bits (218), Expect = 7e-16 Identities = 45/68 (66%), Positives = 48/68 (70%) Frame = +3 Query: 72 SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251 SAFFVFLEEFRKTFK ENP VKAVS VGKAGGEKWKSL+ EY+KL Sbjct: 58 SAFFVFLEEFRKTFKAENPNVKAVSVVGKAGGEKWKSLSSAEKAPYESKAAKRKAEYEKL 117 Query: 252 ITAYNKKQ 275 I AY+KKQ Sbjct: 118 IKAYDKKQ 125 >gb|AEV43366.1| group B HMG-box protein [Citrus sinensis] Length = 165 Score = 87.8 bits (216), Expect = 1e-15 Identities = 44/68 (64%), Positives = 50/68 (73%) Frame = +3 Query: 72 SAFFVFLEEFRKTFKKENPTVKAVSAVGKAGGEKWKSLTXXXXXXXXXXXXXXXGEYQKL 251 SAFFVFLEEFRK +K+E+P VKAVSAVGKAGGEKWKSLT +Y+KL Sbjct: 61 SAFFVFLEEFRKVYKQEHPNVKAVSAVGKAGGEKWKSLTDAEKAPFEAKAAKRKLDYEKL 120 Query: 252 ITAYNKKQ 275 +TAYNKKQ Sbjct: 121 MTAYNKKQ 128