BLASTX nr result

ID: Bupleurum21_contig00005011 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00005011
         (615 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319745.1| chromodomain protein [Populus trichocarpa] g...    94   2e-17
ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus c...    93   3e-17
ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis...    91   1e-16
ref|XP_002325456.1| chromo domain protein [Populus trichocarpa] ...    91   2e-16
ref|NP_197271.1| chromo domain-containing protein LHP1 [Arabidop...    89   5e-16

>ref|XP_002319745.1| chromodomain protein [Populus trichocarpa]
           gi|222858121|gb|EEE95668.1| chromodomain protein
           [Populus trichocarpa]
          Length = 438

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 46/86 (53%), Positives = 52/86 (60%)
 Frame = +1

Query: 334 RPKLAEGFYEIEAXXXXXXXKGQVQYLIKWRDWPETANTWEPYDNLVSCSDVIEAFEEXX 513
           R KL EGF+EIEA       KGQ+QYLIKWR WPETANTWEP +NL SCSDVI+AFEE  
Sbjct: 86  RTKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCSDVIDAFEESL 145

Query: 514 XXXXXXXXXXXXXXXXXIPQAKKKPQ 591
                             P  KK+P+
Sbjct: 146 RSGRSSRKRKRKHGAPHTPSKKKQPR 171


>ref|XP_002523971.1| Heterochromatin protein, putative [Ricinus communis]
           gi|223536698|gb|EEF38339.1| Heterochromatin protein,
           putative [Ricinus communis]
          Length = 462

 Score = 93.2 bits (230), Expect = 3e-17
 Identities = 42/58 (72%), Positives = 46/58 (79%)
 Frame = +1

Query: 334 RPKLAEGFYEIEAXXXXXXXKGQVQYLIKWRDWPETANTWEPYDNLVSCSDVIEAFEE 507
           RPKL EGF+EIEA       KGQ+QYLIKWR WPE ANTWEP +NL SCSDVI+AFEE
Sbjct: 111 RPKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPEAANTWEPLENLQSCSDVIDAFEE 168


>ref|XP_002273726.1| PREDICTED: chromo domain protein LHP1 [Vitis vinifera]
           gi|296090196|emb|CBI40015.3| unnamed protein product
           [Vitis vinifera]
          Length = 424

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 40/58 (68%), Positives = 46/58 (79%)
 Frame = +1

Query: 334 RPKLAEGFYEIEAXXXXXXXKGQVQYLIKWRDWPETANTWEPYDNLVSCSDVIEAFEE 507
           RPKL +GFYEIEA       KGQ+QYLIKWR WPE ANTWEP +NL +CSDVI+AFE+
Sbjct: 88  RPKLDDGFYEIEAIRRRRVRKGQLQYLIKWRGWPENANTWEPLENLQACSDVIDAFED 145


>ref|XP_002325456.1| chromo domain protein [Populus trichocarpa]
           gi|222862331|gb|EEE99837.1| chromo domain protein
           [Populus trichocarpa]
          Length = 435

 Score = 90.9 bits (224), Expect = 2e-16
 Identities = 41/58 (70%), Positives = 46/58 (79%)
 Frame = +1

Query: 334 RPKLAEGFYEIEAXXXXXXXKGQVQYLIKWRDWPETANTWEPYDNLVSCSDVIEAFEE 507
           R KL EGF+EIEA       KGQ+QYLIKWR WPETANTWEP +NL SC+DVI+AFEE
Sbjct: 86  RTKLDEGFFEIEAIRRKRVRKGQLQYLIKWRGWPETANTWEPLENLQSCADVIDAFEE 143


>ref|NP_197271.1| chromo domain-containing protein LHP1 [Arabidopsis thaliana]
           gi|110810410|sp|Q946J8.2|LHP1_ARATH RecName: Full=Chromo
           domain-containing protein LHP1; AltName: Full=Protein
           LIKE HETEROCHROMATIN PROTEIN 1; AltName: Full=Protein
           TERMINAL FLOWER 2 gi|9759046|dbj|BAB09568.1| unnamed
           protein product [Arabidopsis thaliana]
           gi|16444951|dbj|BAB70689.1| TERMINAL FLOWER 2
           [Arabidopsis thaliana] gi|115646754|gb|ABJ17106.1|
           At5g17690 [Arabidopsis thaliana]
           gi|332005073|gb|AED92456.1| chromo domain-containing
           protein LHP1 [Arabidopsis thaliana]
          Length = 445

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 41/57 (71%), Positives = 45/57 (78%)
 Frame = +1

Query: 334 RPKLAEGFYEIEAXXXXXXXKGQVQYLIKWRDWPETANTWEPYDNLVSCSDVIEAFE 504
           RPKL EGFYEIEA       KG+VQYLIKWR WPETANTWEP +NL S +DVI+AFE
Sbjct: 100 RPKLDEGFYEIEAIRRKRVRKGKVQYLIKWRGWPETANTWEPLENLQSIADVIDAFE 156


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