BLASTX nr result

ID: Bupleurum21_contig00004959 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004959
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521976.1| transcription factor, putative [Ricinus comm...   254   2e-65
ref|XP_002266063.2| PREDICTED: probable lysine-specific demethyl...   237   3e-60
emb|CBI22382.3| unnamed protein product [Vitis vinifera]              237   3e-60
gb|AAF99757.1|AC003981_7 F22O13.10 [Arabidopsis thaliana]             233   8e-59
ref|NP_172338.4| transcription factor jumonji and C5HC2 type zin...   233   8e-59

>ref|XP_002521976.1| transcription factor, putative [Ricinus communis]
            gi|223538780|gb|EEF40380.1| transcription factor,
            putative [Ricinus communis]
          Length = 1202

 Score =  254 bits (650), Expect = 2e-65
 Identities = 139/255 (54%), Positives = 166/255 (65%), Gaps = 13/255 (5%)
 Frame = +2

Query: 338  QPCDSRKSNEEDRQITDSVSRLGDNXXXXXXXX---QNNLDRYFRQKGPRIAKVVRRINC 508
            Q   S K N+ED+   D+ S   DN           QNNLDRYFRQKGPRIAKVVRRINC
Sbjct: 903  QQIGSAKPNDEDKMGADATSNSVDNSRAMAGSPSCSQNNLDRYFRQKGPRIAKVVRRINC 962

Query: 509  NVEPLDYGVVQPGKFWCDTRGIYPKGFRSRVRYISILNPSTTCYYVSEILDIGRDQPLFM 688
            NVEPL++GVV  GK W +++ I+PKGFRSRVRYIS+L+P+  CYYVSEILD G+D+PLFM
Sbjct: 963  NVEPLEFGVVLSGKLWSNSQAIFPKGFRSRVRYISVLDPTNMCYYVSEILDAGQDRPLFM 1022

Query: 689  VSVEDAPREVFAHISAMRSWEMVRERVNQEITXXXXXXXXXXXXXXXXXXXDGIEMFGFS 868
            VS+E  P EVF +ISA R WEMVR+RVNQEIT                   DG+EMFGFS
Sbjct: 1023 VSLEHCPSEVFINISASRCWEMVRDRVNQEITKHHKLGRMNLPPLQPPGSLDGLEMFGFS 1082

Query: 869  SPAIIQVIQKMDHNRVCTEYWKSRPPTQIPEHAKPPPS----NNSG-----NLDPNNVDS 1021
            SPAI+QVI+ +D NRVCT+YW SRP ++ P+   P PS     N G     N + NN   
Sbjct: 1083 SPAIVQVIEALDRNRVCTDYWDSRPYSR-PQGQIPQPSQLIKGNGGYFHGINEEQNNDGG 1141

Query: 1022 CKGAR-LPAGVDAVL 1063
              G   LP  VD +L
Sbjct: 1142 NSGNHLLPNAVDTIL 1156


>ref|XP_002266063.2| PREDICTED: probable lysine-specific demethylase JMJ14-like [Vitis
            vinifera]
          Length = 1271

 Score =  237 bits (605), Expect = 3e-60
 Identities = 133/264 (50%), Positives = 159/264 (60%), Gaps = 13/264 (4%)
 Frame = +2

Query: 311  NAEGNLQTPQPCDSRKSNEEDR----------QITDSVSRLGDNXXXXXXXXQNNLDRYF 460
            NA   LQ P P    K N ED           ++ D+   +  N        QNNLDRYF
Sbjct: 969  NAGSYLQHPLPHVGGKPNGEDNNDKVGPAAGPKLIDNARTIAGNPSCS----QNNLDRYF 1024

Query: 461  RQKGPRIAKVVRRINCNVEPLDYGVVQPGKFWCDTRGIYPKGFRSRVRYISILNPSTTCY 640
            RQKGPRIAKVVRRINC VEPL++GVV  GK WC+ + I+PKGFRSRV+YIS+L+P+   Y
Sbjct: 1025 RQKGPRIAKVVRRINCIVEPLEFGVVISGKLWCNRQAIFPKGFRSRVKYISVLDPTNMSY 1084

Query: 641  YVSEILDIGRDQPLFMVSVEDAPREVFAHISAMRSWEMVRERVNQEITXXXXXXXXXXXX 820
            YVSEILD G   PLFMVS+E  P EVF H+SA R WEMVRERVNQEIT            
Sbjct: 1085 YVSEILDAGLAGPLFMVSLEHYPSEVFVHVSAARCWEMVRERVNQEITKQHKLGRMPLPP 1144

Query: 821  XXXXXXXDGIEMFGFSSPAIIQVIQKMDHNRVCTEYWKSRPPTQIPEHAKPPPSNNSGNL 1000
                   DG+EMFGFSSP I+Q ++ MD NRVCTEYW SRP   I +H++   S  + + 
Sbjct: 1145 LQPPGSLDGLEMFGFSSPTIMQAVEAMDRNRVCTEYWNSRP--LIAQHSQLEGSVGNLHR 1202

Query: 1001 DPNNVDSCKGAR---LPAGVDAVL 1063
             P   +   G      P GVD +L
Sbjct: 1203 MPEEQNYQYGQSNHPFPVGVDTIL 1226


>emb|CBI22382.3| unnamed protein product [Vitis vinifera]
          Length = 1178

 Score =  237 bits (605), Expect = 3e-60
 Identities = 133/264 (50%), Positives = 159/264 (60%), Gaps = 13/264 (4%)
 Frame = +2

Query: 311  NAEGNLQTPQPCDSRKSNEEDR----------QITDSVSRLGDNXXXXXXXXQNNLDRYF 460
            NA   LQ P P    K N ED           ++ D+   +  N        QNNLDRYF
Sbjct: 876  NAGSYLQHPLPHVGGKPNGEDNNDKVGPAAGPKLIDNARTIAGNPSCS----QNNLDRYF 931

Query: 461  RQKGPRIAKVVRRINCNVEPLDYGVVQPGKFWCDTRGIYPKGFRSRVRYISILNPSTTCY 640
            RQKGPRIAKVVRRINC VEPL++GVV  GK WC+ + I+PKGFRSRV+YIS+L+P+   Y
Sbjct: 932  RQKGPRIAKVVRRINCIVEPLEFGVVISGKLWCNRQAIFPKGFRSRVKYISVLDPTNMSY 991

Query: 641  YVSEILDIGRDQPLFMVSVEDAPREVFAHISAMRSWEMVRERVNQEITXXXXXXXXXXXX 820
            YVSEILD G   PLFMVS+E  P EVF H+SA R WEMVRERVNQEIT            
Sbjct: 992  YVSEILDAGLAGPLFMVSLEHYPSEVFVHVSAARCWEMVRERVNQEITKQHKLGRMPLPP 1051

Query: 821  XXXXXXXDGIEMFGFSSPAIIQVIQKMDHNRVCTEYWKSRPPTQIPEHAKPPPSNNSGNL 1000
                   DG+EMFGFSSP I+Q ++ MD NRVCTEYW SRP   I +H++   S  + + 
Sbjct: 1052 LQPPGSLDGLEMFGFSSPTIMQAVEAMDRNRVCTEYWNSRP--LIAQHSQLEGSVGNLHR 1109

Query: 1001 DPNNVDSCKGAR---LPAGVDAVL 1063
             P   +   G      P GVD +L
Sbjct: 1110 MPEEQNYQYGQSNHPFPVGVDTIL 1133


>gb|AAF99757.1|AC003981_7 F22O13.10 [Arabidopsis thaliana]
          Length = 1239

 Score =  233 bits (593), Expect = 8e-59
 Identities = 120/247 (48%), Positives = 149/247 (60%), Gaps = 5/247 (2%)
 Frame = +2

Query: 338  QPCDSRKSNEEDRQITDSVSRLGDNXXXXXXXXQNNLDRYFRQKGPRIAKVVRRINCNVE 517
            +P   +  N     I D V     +         N+ DR+ RQKGPRIAKVVRRINCNVE
Sbjct: 938  KPTSCKSKNSGGLAIVDVVDGTRSSSGTPSCSQNNSPDRFIRQKGPRIAKVVRRINCNVE 997

Query: 518  PLDYGVVQPGKFWCDTRGIYPKGFRSRVRYISILNPSTTCYYVSEILDIGRDQPLFMVSV 697
            PL YG V  GK WC  R I+PKGFRSRV+YI+IL+P+  C+Y+SEILD GR+ PLFMV +
Sbjct: 998  PLSYGCVLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILDAGRNSPLFMVYL 1057

Query: 698  EDAPREVFAHISAMRSWEMVRERVNQEITXXXXXXXXXXXXXXXXXXXDGIEMFGFSSPA 877
            E  P EVF H+S  R WEMVRERVNQEIT                   DG EMFG+SSPA
Sbjct: 1058 ESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPDGFEMFGYSSPA 1117

Query: 878  IIQVIQKMDHNRVCTEYWK----SRPPTQIPEHAKPPPSNNSGNLDPNNVDSCKGARL-P 1042
            I+Q I+ +D NRVCT+YW     SRP  Q P +     +N SG  +  N+    G  + P
Sbjct: 1118 IVQAIEALDVNRVCTDYWDSRPYSRPQVQFPANPLLREANTSGRSNVGNLQLNPGHHISP 1177

Query: 1043 AGVDAVL 1063
             G++++L
Sbjct: 1178 TGINSIL 1184


>ref|NP_172338.4| transcription factor jumonji and C5HC2 type zinc finger
            domain-containing protein [Arabidopsis thaliana]
            gi|334182398|ref|NP_001184940.1| transcription factor
            jumonji and C5HC2 type zinc finger domain-containing
            protein [Arabidopsis thaliana]
            gi|225897896|dbj|BAH30280.1| hypothetical protein
            [Arabidopsis thaliana] gi|332190197|gb|AEE28318.1|
            transcription factor jumonji and C5HC2 type zinc finger
            domain-containing protein [Arabidopsis thaliana]
            gi|332190198|gb|AEE28319.1| transcription factor jumonji
            and C5HC2 type zinc finger domain-containing protein
            [Arabidopsis thaliana]
          Length = 1209

 Score =  233 bits (593), Expect = 8e-59
 Identities = 120/247 (48%), Positives = 149/247 (60%), Gaps = 5/247 (2%)
 Frame = +2

Query: 338  QPCDSRKSNEEDRQITDSVSRLGDNXXXXXXXXQNNLDRYFRQKGPRIAKVVRRINCNVE 517
            +P   +  N     I D V     +         N+ DR+ RQKGPRIAKVVRRINCNVE
Sbjct: 924  KPTSCKSKNSGGLAIVDVVDGTRSSSGTPSCSQNNSPDRFIRQKGPRIAKVVRRINCNVE 983

Query: 518  PLDYGVVQPGKFWCDTRGIYPKGFRSRVRYISILNPSTTCYYVSEILDIGRDQPLFMVSV 697
            PL YG V  GK WC  R I+PKGFRSRV+YI+IL+P+  C+Y+SEILD GR+ PLFMV +
Sbjct: 984  PLSYGCVLSGKSWCSRRAIFPKGFRSRVKYINILDPTNMCFYISEILDAGRNSPLFMVYL 1043

Query: 698  EDAPREVFAHISAMRSWEMVRERVNQEITXXXXXXXXXXXXXXXXXXXDGIEMFGFSSPA 877
            E  P EVF H+S  R WEMVRERVNQEIT                   DG EMFG+SSPA
Sbjct: 1044 ESNPSEVFVHMSPTRCWEMVRERVNQEITKQHKAGKSDLPPLQPSGSPDGFEMFGYSSPA 1103

Query: 878  IIQVIQKMDHNRVCTEYWK----SRPPTQIPEHAKPPPSNNSGNLDPNNVDSCKGARL-P 1042
            I+Q I+ +D NRVCT+YW     SRP  Q P +     +N SG  +  N+    G  + P
Sbjct: 1104 IVQAIEALDVNRVCTDYWDSRPYSRPQVQFPANPLLREANTSGRSNVGNLQLNPGHHISP 1163

Query: 1043 AGVDAVL 1063
             G++++L
Sbjct: 1164 TGINSIL 1170


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