BLASTX nr result

ID: Bupleurum21_contig00004925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004925
         (1175 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like...   422   e-115
emb|CBI40723.3| unnamed protein product [Vitis vinifera]              422   e-115
ref|XP_002510683.1| conserved hypothetical protein [Ricinus comm...   416   e-114
ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [C...   392   e-107
ref|XP_002868989.1| hypothetical protein ARALYDRAFT_912599 [Arab...   374   e-101

>ref|XP_002272531.1| PREDICTED: UPF0392 protein RCOM_0530710-like [Vitis vinifera]
          Length = 595

 Score =  422 bits (1084), Expect = e-115
 Identities = 204/391 (52%), Positives = 260/391 (66%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1165 RSTYTCELPVRLRRRTPFPEPVLVNSPVGSLPATANPPADMLRWDYLVYDAMFTEDDVVV 986
            R T+ C +P R+RR  P+ +P L  +         +   ++ RW +L Y+++ T++DVV+
Sbjct: 161  RRTFKCVIPRRIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAYESLSTQNDVVL 220

Query: 985  FAKGVNKRQGKNWDPWEFNCVFGDDVANGVRTAVTSSAQEVFRCQLPDLTGVIPSQ---S 815
            F KGVN RQG N  P +  CVFG+D    VRTAVT+S+QEVFRC+ PDL  +   +    
Sbjct: 221  FVKGVNNRQGVNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPDLRALSHGEIENE 280

Query: 814  LIKVSLEVSASKRVIPSIAYASPARKIAKHEPKALLCACTMVFNVAKFLREWIIYHSSIG 635
             IK+SLE+S   RV+PS+AY +P R +A  EPK+ LCA TM++N AKFL+EW++YHS IG
Sbjct: 281  RIKISLEISDENRVVPSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYHSRIG 340

Query: 634  VDRFMLYDNVSEDEFNQVVSELVNEGYNISTKFWQWPKTQEAGFSHCAIDNKDSCTWMMY 455
            V++F+LYDN S+DE   +V EL  +G+N+ T  W WPKTQEAGFSH AI  KD+C WMMY
Sbjct: 341  VEKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDTCKWMMY 400

Query: 454  IDVDEFVYXXXXXXXXXXXXSMLQSLLPXXXXXXXXXXXXVAHEVGEIMIACREFGPSNQ 275
            +DVDEFV+             ML SLLP                VG+I+I C EFGPSNQ
Sbjct: 401  VDVDEFVFSPTWLNSSTPSTKMLFSLLP----------NKPTSNVGQILIRCNEFGPSNQ 450

Query: 274  KSHPVEGVMQGYNCRKKMPNRHKSIVLLDAIHDSLVNVVHHFHLKEGYMMKRIDTYNAVV 95
             SHPV GV QGY CR++   RHKS+VLL+A+  SLVN VHHF LKEG+  KR+     VV
Sbjct: 451  HSHPVHGVTQGYTCRRRAEQRHKSVVLLEAVDSSLVNAVHHFGLKEGFNGKRLSLSQGVV 510

Query: 94   NHYKFQAWPEFKAKFRRRVSAYVADWTQTVN 2
            NHYK+QAW EFKAKFRRRVSAYV DWT   N
Sbjct: 511  NHYKYQAWSEFKAKFRRRVSAYVVDWTDEAN 541


>emb|CBI40723.3| unnamed protein product [Vitis vinifera]
          Length = 565

 Score =  422 bits (1084), Expect = e-115
 Identities = 204/391 (52%), Positives = 260/391 (66%), Gaps = 3/391 (0%)
 Frame = -2

Query: 1165 RSTYTCELPVRLRRRTPFPEPVLVNSPVGSLPATANPPADMLRWDYLVYDAMFTEDDVVV 986
            R T+ C +P R+RR  P+ +P L  +         +   ++ RW +L Y+++ T++DVV+
Sbjct: 131  RRTFKCVIPRRIRRFRPYFQPALTRAAPAKQREIHSFTRELFRWTFLAYESLSTQNDVVL 190

Query: 985  FAKGVNKRQGKNWDPWEFNCVFGDDVANGVRTAVTSSAQEVFRCQLPDLTGVIPSQ---S 815
            F KGVN RQG N  P +  CVFG+D    VRTAVT+S+QEVFRC+ PDL  +   +    
Sbjct: 191  FVKGVNNRQGVNRSPSQLRCVFGNDATIAVRTAVTTSSQEVFRCRHPDLRALSHGEIENE 250

Query: 814  LIKVSLEVSASKRVIPSIAYASPARKIAKHEPKALLCACTMVFNVAKFLREWIIYHSSIG 635
             IK+SLE+S   RV+PS+AY +P R +A  EPK+ LCA TM++N AKFL+EW++YHS IG
Sbjct: 251  RIKISLEISDENRVVPSVAYYTPMRTVATLEPKSQLCASTMIYNAAKFLKEWVVYHSRIG 310

Query: 634  VDRFMLYDNVSEDEFNQVVSELVNEGYNISTKFWQWPKTQEAGFSHCAIDNKDSCTWMMY 455
            V++F+LYDN S+DE   +V EL  +G+N+ T  W WPKTQEAGFSH AI  KD+C WMMY
Sbjct: 311  VEKFILYDNGSDDELQTIVEELNQDGFNVKTVLWPWPKTQEAGFSHSAIYAKDTCKWMMY 370

Query: 454  IDVDEFVYXXXXXXXXXXXXSMLQSLLPXXXXXXXXXXXXVAHEVGEIMIACREFGPSNQ 275
            +DVDEFV+             ML SLLP                VG+I+I C EFGPSNQ
Sbjct: 371  VDVDEFVFSPTWLNSSTPSTKMLFSLLP----------NKPTSNVGQILIRCNEFGPSNQ 420

Query: 274  KSHPVEGVMQGYNCRKKMPNRHKSIVLLDAIHDSLVNVVHHFHLKEGYMMKRIDTYNAVV 95
             SHPV GV QGY CR++   RHKS+VLL+A+  SLVN VHHF LKEG+  KR+     VV
Sbjct: 421  HSHPVHGVTQGYTCRRRAEQRHKSVVLLEAVDSSLVNAVHHFGLKEGFNGKRLSLSQGVV 480

Query: 94   NHYKFQAWPEFKAKFRRRVSAYVADWTQTVN 2
            NHYK+QAW EFKAKFRRRVSAYV DWT   N
Sbjct: 481  NHYKYQAWSEFKAKFRRRVSAYVVDWTDEAN 511


>ref|XP_002510683.1| conserved hypothetical protein [Ricinus communis]
            gi|223551384|gb|EEF52870.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 604

 Score =  416 bits (1068), Expect = e-114
 Identities = 214/403 (53%), Positives = 271/403 (67%), Gaps = 12/403 (2%)
 Frame = -2

Query: 1174 SPARSTYTCELPVRLRRRTPFPEPVLVNSPVGSLPAT---ANPPADMLRWDYLVYDAMFT 1004
            S  ++T+ C LP   RRR PF  PVL+      LP     ++PP ++LRW  LVY++   
Sbjct: 159  STNQTTFKCLLPRSSRRRLPFVAPVLMRLLEKELPIPRPLSSPPEEILRWSKLVYESFSA 218

Query: 1003 EDDVVVFAKGVNKRQGKNWDPWEFNCVFGDDVANG--VRTAVTSSAQEVFRCQLPDLTGV 830
            E+DVV+FAKG+N RQG N  P E  CVF  +  N   V+TAVTSS QEVFRC  PDLT +
Sbjct: 219  ENDVVLFAKGLNNRQGINRSPSELRCVFIHESDNNIIVKTAVTSSIQEVFRCDHPDLTAL 278

Query: 829  IPSQS------LIKVSLEVSASKRVIPSIAYASPARKIAKHEPK-ALLCACTMVFNVAKF 671
            +           +KVSLEV   K+V+P+++Y +P RKIA  E K + LCA TMV+NV K+
Sbjct: 279  VSGVEEGEDPIKLKVSLEVLEVKKVMPTVSYYNPWRKIANPETKKSQLCATTMVYNVGKY 338

Query: 670  LREWIIYHSSIGVDRFMLYDNVSEDEFNQVVSELVNEGYNISTKFWQWPKTQEAGFSHCA 491
            LREW++YHS IG+++F+LYDN S+D+ + VV EL  +GYN+ T  W WPKTQEA FSH A
Sbjct: 339  LREWVMYHSKIGIEKFILYDNDSDDDLSIVVKELNQQGYNVETLLWFWPKTQEAVFSHAA 398

Query: 490  IDNKDSCTWMMYIDVDEFVYXXXXXXXXXXXXSMLQSLLPXXXXXXXXXXXXVAHEVGEI 311
            +  +DSC WMMY+DVDEFV+             +L+SLLP                +G++
Sbjct: 399  LHARDSCKWMMYVDVDEFVFAPSWDNSSQPFDRLLKSLLPSS-----------GEMIGQV 447

Query: 310  MIACREFGPSNQKSHPVEGVMQGYNCRKKMPNRHKSIVLLDAIHDSLVNVVHHFHLKEGY 131
             I C EFGPSNQKS+PVEGV QGYNCR+++ NRHKSIVLL+AIH SL NV+HHF LKE Y
Sbjct: 448  SIKCNEFGPSNQKSNPVEGVTQGYNCRRRVENRHKSIVLLEAIHRSLHNVIHHFSLKEEY 507

Query: 130  MMKRIDTYNAVVNHYKFQAWPEFKAKFRRRVSAYVADWTQTVN 2
              K++    AVVNHYK+QAW EFKAKFRRRVSAYV DW Q +N
Sbjct: 508  RTKQLSLERAVVNHYKYQAWSEFKAKFRRRVSAYVVDWMQAMN 550


>ref|XP_004144291.1| PREDICTED: UPF0392 protein At1g27200-like [Cucumis sativus]
            gi|449489430|ref|XP_004158309.1| PREDICTED: UPF0392
            protein At1g27200-like [Cucumis sativus]
          Length = 577

 Score =  392 bits (1007), Expect = e-107
 Identities = 193/399 (48%), Positives = 265/399 (66%), Gaps = 11/399 (2%)
 Frame = -2

Query: 1165 RSTYTCELPVRLRRRTPFPEPVLVNSP---VGSLPATANPPADMLRWDYLVYDAMFTEDD 995
            R T+ C +P  +RR  PF +P+L  SP     S  ++++P  +++RW +  Y+A  TE+D
Sbjct: 137  RVTFKCLMPESVRRLRPFFQPLLTKSPDKEFSSSLSSSSPAPELMRWTFFAYEAFETEED 196

Query: 994  VVVFAKGVNKRQGKNWDPWEFNCVFGDDVANGVRTAVTSSAQEVFRCQLPDLTGVIPSQS 815
            VV+F KGVN RQG N  P + NCVFGD   + +RTAVTSS QEVFRC+ P+LT       
Sbjct: 197  VVLFVKGVNNRQGSNRQPTDLNCVFGDG-DDAIRTAVTSSVQEVFRCRHPNLT-TSEDHD 254

Query: 814  LIKVSLEVSASKR---VIPSIAYASPARK-----IAKHEPKALLCACTMVFNVAKFLREW 659
              K++LE+  ++    ++PS+AY SP R      + + E ++++CACTMV+NV KFLREW
Sbjct: 255  KFKITLEILDARGKNILVPSVAYYSPRRSGDGGGLVETEAQSMICACTMVYNVGKFLREW 314

Query: 658  IIYHSSIGVDRFMLYDNVSEDEFNQVVSELVNEGYNISTKFWQWPKTQEAGFSHCAIDNK 479
            ++Y+S IGV++F+LYDN SEDE + V+ EL  EGYNI   FW WPKTQEAGFSH    +K
Sbjct: 315  VMYYSRIGVEKFILYDNGSEDEISAVLKELKQEGYNIEIVFWIWPKTQEAGFSHSVEYSK 374

Query: 478  DSCTWMMYIDVDEFVYXXXXXXXXXXXXSMLQSLLPXXXXXXXXXXXXVAHEVGEIMIAC 299
             SC WMM++D+DEFV+            +ML SLLP                +G + + C
Sbjct: 375  KSCKWMMFVDIDEFVFSPSWLNSLKPSKNMLNSLLPTKNSG-----------IGMVTVMC 423

Query: 298  REFGPSNQKSHPVEGVMQGYNCRKKMPNRHKSIVLLDAIHDSLVNVVHHFHLKEGYMMKR 119
             ++GPS++ SHP EGV QGYNCR+K+  RHKSIVLL+A+  SL+NV+HHF L++ +  ++
Sbjct: 424  NDYGPSDRISHPAEGVTQGYNCRRKVEERHKSIVLLEAVDRSLLNVIHHFKLRKEFQSRQ 483

Query: 118  IDTYNAVVNHYKFQAWPEFKAKFRRRVSAYVADWTQTVN 2
            +    AVVNHYK+QAWPEF+ KFRRRVSAYV DW  + N
Sbjct: 484  MRVEEAVVNHYKYQAWPEFRMKFRRRVSAYVVDWKNSAN 522


>ref|XP_002868989.1| hypothetical protein ARALYDRAFT_912599 [Arabidopsis lyrata subsp.
            lyrata] gi|297314825|gb|EFH45248.1| hypothetical protein
            ARALYDRAFT_912599 [Arabidopsis lyrata subsp. lyrata]
          Length = 588

 Score =  374 bits (960), Expect = e-101
 Identities = 188/392 (47%), Positives = 245/392 (62%), Gaps = 4/392 (1%)
 Frame = -2

Query: 1165 RSTYTCELPVRLRRRTPFPEPVLVNSPVGSLPATANPPADMLRWDYLVYDAMFTEDDVVV 986
            R+++ C LP   R   P P P+L +S    L      P D+  W+++V++A+ TE+DVV+
Sbjct: 159  RTSFRCSLPGIYRHHHPIPTPILASSKTFQLSPETRWP-DLPLWNFVVFEAISTENDVVL 217

Query: 985  FAKGVNKRQGKNWDPWEFNCVFGDDVANGVRTAVTSSAQEVFRCQLPDLTGVIPSQSLIK 806
            F KG N+  G N  P  F CVFG++    +RTAVTSS QEVFRC LPD+T   P    IK
Sbjct: 218  FVKGPNRGLGSNKPPESFRCVFGEESDTAIRTAVTSSVQEVFRCSLPDITIDTP----IK 273

Query: 805  VSLEVSASKR----VIPSIAYASPARKIAKHEPKALLCACTMVFNVAKFLREWIIYHSSI 638
            + LE  A+ +     IPS+AY +P   +A+   K LLCA TMV+NVAK+LREW++YH++I
Sbjct: 274  IYLEAVATDKEETKTIPSVAYYTPKHTLAEPREKVLLCATTMVYNVAKYLREWVMYHAAI 333

Query: 637  GVDRFMLYDNVSEDEFNQVVSELVNEGYNISTKFWQWPKTQEAGFSHCAIDNKDSCTWMM 458
            G+ RF++YDN S+DE N VV  L +E Y++    W WPKTQEAGFSH A+   D+CTWMM
Sbjct: 334  GIQRFIIYDNGSDDELNDVVEVLNSEKYDVIKVLWIWPKTQEAGFSHAAVYGNDTCTWMM 393

Query: 457  YIDVDEFVYXXXXXXXXXXXXSMLQSLLPXXXXXXXXXXXXVAHEVGEIMIACREFGPSN 278
            Y+DVDEF++             M++SLLP                +G++     EFGPSN
Sbjct: 394  YLDVDEFLFSPAWDKQSQPSDRMIRSLLPSNHSM-----------IGQVSFKSHEFGPSN 442

Query: 277  QKSHPVEGVMQGYNCRKKMPNRHKSIVLLDAIHDSLVNVVHHFHLKEGYMMKRIDTYNAV 98
            Q  HP EGV QGY CR++   RHKSIV L  +  SL   +HHF LK  Y  +  DT   V
Sbjct: 443  QTKHPREGVTQGYTCRREEDQRHKSIVRLSVVEHSLYTAIHHFGLKGEYEWRVADTEEGV 502

Query: 97   VNHYKFQAWPEFKAKFRRRVSAYVADWTQTVN 2
            VNHYK+QAW EFKAKF+RRVSAYV DWT+  N
Sbjct: 503  VNHYKYQAWREFKAKFKRRVSAYVVDWTRVSN 534


Top