BLASTX nr result

ID: Bupleurum21_contig00004912 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004912
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-intera...   219   3e-55
ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-typ...   219   3e-55
gb|ABK24159.1| unknown [Picea sitchensis]                             219   5e-55
ref|XP_003527091.1| PREDICTED: peptidyl-prolyl cis-trans isomera...   218   8e-55
ref|XP_002514732.1| rotamase, putative [Ricinus communis] gi|223...   217   1e-54

>ref|NP_564250.1| peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [Arabidopsis
           thaliana] gi|9797744|gb|AAF98562.1|AC013427_5 Contains
           similarity to peptidyl-prolyl cis-trans isomerase EPVH
           from Homo sapiens gb|AF143096 and contains a Rotamase
           (PPIC-type PPIASE) PF|00639 domain. ESTs gb|T45176,
           gb|F14479, gb|AA586142, gb|F14459, gb|AI997648 come from
           this gene [Arabidopsis thaliana]
           gi|12083236|gb|AAG48777.1|AF332414_1 unknown protein
           [Arabidopsis thaliana] gi|21553425|gb|AAM62518.1|
           unknown [Arabidopsis thaliana]
           gi|332192582|gb|AEE30703.1| peptidyl-prolyl cis-trans
           isomerase NIMA-interacting 4 [Arabidopsis thaliana]
          Length = 142

 Score =  219 bits (559), Expect = 3e-55
 Identities = 101/104 (97%), Positives = 103/104 (99%)
 Frame = +2

Query: 293 TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 472
           TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL
Sbjct: 39  TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 98

Query: 473 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 604
           GWFPRGKMAGPFQ+VAFNTPVG TSAPFKSTHGYHIIL+EGRKN
Sbjct: 99  GWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 142


>ref|XP_002893399.1| peptidyl-prolyl cis-trans isomerase PPIC-type family protein
           [Arabidopsis lyrata subsp. lyrata]
           gi|297339241|gb|EFH69658.1| peptidyl-prolyl cis-trans
           isomerase PPIC-type family protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 142

 Score =  219 bits (559), Expect = 3e-55
 Identities = 101/104 (97%), Positives = 103/104 (99%)
 Frame = +2

Query: 293 TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 472
           TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL
Sbjct: 39  TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 98

Query: 473 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 604
           GWFPRGKMAGPFQ+VAFNTPVG TSAPFKSTHGYHIIL+EGRKN
Sbjct: 99  GWFPRGKMAGPFQDVAFNTPVGVTSAPFKSTHGYHIILSEGRKN 142


>gb|ABK24159.1| unknown [Picea sitchensis]
          Length = 142

 Score =  219 bits (557), Expect = 5e-55
 Identities = 101/104 (97%), Positives = 104/104 (100%)
 Frame = +2

Query: 293 TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 472
           TCTYVKARH+LCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAK+AAEYSECPSGKKGGDL
Sbjct: 39  TCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKVAAEYSECPSGKKGGDL 98

Query: 473 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 604
           G+FPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN
Sbjct: 99  GFFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 142


>ref|XP_003527091.1| PREDICTED: peptidyl-prolyl cis-trans isomerase NIMA-interacting
           4-like [Glycine max]
          Length = 146

 Score =  218 bits (555), Expect = 8e-55
 Identities = 99/104 (95%), Positives = 102/104 (98%)
 Frame = +2

Query: 293 TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 472
           TCTYVKARH+LCEKQGKINEAYKKLQDGWL NGDKVPPAEFAK+A EYSECPSGKKGGDL
Sbjct: 43  TCTYVKARHILCEKQGKINEAYKKLQDGWLGNGDKVPPAEFAKVAQEYSECPSGKKGGDL 102

Query: 473 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 604
           GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIIL+EGRKN
Sbjct: 103 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILSEGRKN 146


>ref|XP_002514732.1| rotamase, putative [Ricinus communis] gi|223546336|gb|EEF47838.1|
           rotamase, putative [Ricinus communis]
          Length = 145

 Score =  217 bits (553), Expect = 1e-54
 Identities = 100/104 (96%), Positives = 102/104 (98%)
 Frame = +2

Query: 293 TCTYVKARHVLCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKIAAEYSECPSGKKGGDL 472
           TCTYVKARH+LCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAK+AAEYSECPSGKKGGDL
Sbjct: 42  TCTYVKARHILCEKQGKINEAYKKLQDGWLSNGDKVPPAEFAKLAAEYSECPSGKKGGDL 101

Query: 473 GWFPRGKMAGPFQEVAFNTPVGATSAPFKSTHGYHIILAEGRKN 604
           GWFPRGKMAGPFQEVAFNT VGATSAPFKSTHGYHIIL EGRKN
Sbjct: 102 GWFPRGKMAGPFQEVAFNTVVGATSAPFKSTHGYHIILCEGRKN 145


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