BLASTX nr result

ID: Bupleurum21_contig00004897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004897
         (542 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADI80347.1| 3-hydroxy-3-methylglutaryl coenzyme A synthase [P...   161   5e-38
ref|XP_002298076.1| predicted protein [Populus trichocarpa] gi|2...   161   5e-38
gb|ABK93824.1| unknown [Populus trichocarpa]                          161   5e-38
gb|ACD87446.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camptoth...   161   7e-38
gb|ACJ76980.1| hydroxymethylglutaryl-CoA synthase [Linum usitati...   160   1e-37

>gb|ADI80347.1| 3-hydroxy-3-methylglutaryl coenzyme A synthase [Panax ginseng]
          Length = 468

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/78 (96%), Positives = 77/78 (98%)
 Frame = +1

Query: 1   SETVIDKSKSIKTFIMQAFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 180
           SETVIDKSKSIKTF+MQ FE+CGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG
Sbjct: 84  SETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 143

Query: 181 LVVCTDSAVYAEGPARPT 234
           LVVCTDSAVYAEGPARPT
Sbjct: 144 LVVCTDSAVYAEGPARPT 161



 Score = 89.7 bits (221), Expect = 3e-16
 Identities = 40/40 (100%), Positives = 40/40 (100%)
 Frame = +1

Query: 415 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSM 534
           SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSM
Sbjct: 201 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSM 240


>ref|XP_002298076.1| predicted protein [Populus trichocarpa] gi|222845334|gb|EEE82881.1|
           predicted protein [Populus trichocarpa]
          Length = 464

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/78 (96%), Positives = 77/78 (98%)
 Frame = +1

Query: 1   SETVIDKSKSIKTFIMQAFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 180
           SETVIDKSKSIKTF+MQ FE+CGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG
Sbjct: 82  SETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 141

Query: 181 LVVCTDSAVYAEGPARPT 234
           LVVCTDSAVYAEGPARPT
Sbjct: 142 LVVCTDSAVYAEGPARPT 159



 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +1

Query: 415 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSMDD 540
           SEYPVVDGKLSQTCYLMALDSCYK +C KYEK  GKQFS+ D
Sbjct: 199 SEYPVVDGKLSQTCYLMALDSCYKTFCAKYEKSTGKQFSLSD 240


>gb|ABK93824.1| unknown [Populus trichocarpa]
          Length = 464

 Score =  161 bits (408), Expect = 5e-38
 Identities = 75/78 (96%), Positives = 77/78 (98%)
 Frame = +1

Query: 1   SETVIDKSKSIKTFIMQAFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 180
           SETVIDKSKSIKTF+MQ FE+CGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG
Sbjct: 82  SETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 141

Query: 181 LVVCTDSAVYAEGPARPT 234
           LVVCTDSAVYAEGPARPT
Sbjct: 142 LVVCTDSAVYAEGPARPT 159



 Score = 78.6 bits (192), Expect = 6e-13
 Identities = 35/42 (83%), Positives = 37/42 (88%)
 Frame = +1

Query: 415 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSMDD 540
           SEYPVVDGKLSQTCYLMALDSCYK +C KYEK  GKQFS+ D
Sbjct: 199 SEYPVVDGKLSQTCYLMALDSCYKTFCAKYEKSTGKQFSLSD 240


>gb|ACD87446.1| 3-hydroxy-3-methylglutaryl-CoA synthase [Camptotheca acuminata]
          Length = 471

 Score =  161 bits (407), Expect = 7e-38
 Identities = 75/78 (96%), Positives = 76/78 (97%)
 Frame = +1

Query: 1   SETVIDKSKSIKTFIMQAFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 180
           SETVIDKSKS KTF+MQ FEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG
Sbjct: 85  SETVIDKSKSTKTFLMQIFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 144

Query: 181 LVVCTDSAVYAEGPARPT 234
           LVVCTDSAVYAEGPARPT
Sbjct: 145 LVVCTDSAVYAEGPARPT 162



 Score = 88.6 bits (218), Expect = 6e-16
 Identities = 39/42 (92%), Positives = 41/42 (97%)
 Frame = +1

Query: 415 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSMDD 540
           SEYPVVDGKLSQTCYLMALDSCYKRYCHKYE+LEGKQFS+ D
Sbjct: 202 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYERLEGKQFSIAD 243


>gb|ACJ76980.1| hydroxymethylglutaryl-CoA synthase [Linum usitatissimum]
          Length = 222

 Score =  160 bits (405), Expect = 1e-37
 Identities = 74/78 (94%), Positives = 77/78 (98%)
 Frame = +1

Query: 1   SETVIDKSKSIKTFIMQAFEECGNTDIEGVDSTNACYGGTAALFNCVNWVESSSWDGRYG 180
           SETVIDKSKSIKTF+MQ FE+CGNTDIEGVDSTNACYGGTAALFNCVNWVES+SWDGRYG
Sbjct: 50  SETVIDKSKSIKTFLMQIFEKCGNTDIEGVDSTNACYGGTAALFNCVNWVESNSWDGRYG 109

Query: 181 LVVCTDSAVYAEGPARPT 234
           LVVCTDSAVYAEGPARPT
Sbjct: 110 LVVCTDSAVYAEGPARPT 127



 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 35/42 (83%), Positives = 38/42 (90%)
 Frame = +1

Query: 415 SEYPVVDGKLSQTCYLMALDSCYKRYCHKYEKLEGKQFSMDD 540
           SEYPVVDGKLSQTCYLMALD+CYK +C KYEK EGKQFS+ D
Sbjct: 167 SEYPVVDGKLSQTCYLMALDACYKHFCAKYEKFEGKQFSISD 208


Top