BLASTX nr result

ID: Bupleurum21_contig00004886 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004886
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera] gi...   328   1e-87
ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativ...   321   2e-85
ref|XP_002510410.1| rer1 protein, putative [Ricinus communis] gi...   311   2e-82
ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|2...   307   3e-81
gb|ABK25873.1| unknown [Picea sitchensis]                             307   3e-81

>ref|XP_002282050.1| PREDICTED: protein RER1B [Vitis vinifera]
           gi|302142515|emb|CBI19718.3| unnamed protein product
           [Vitis vinifera]
          Length = 194

 Score =  328 bits (841), Expect = 1e-87
 Identities = 157/194 (80%), Positives = 173/194 (89%), Gaps = 3/194 (1%)
 Frame = -2

Query: 909 MEGVLGEGATPLAPLANLKNDFSKLFQFYLDKSTPLPVHRWLGTLAVVMIYVLRVYLLQG 730
           ME V G+ A+ +APLA  KNDFS+ FQ YLDKSTP PVHRWLGTLAV  IYVLRVY +QG
Sbjct: 1   MERVEGDAASTVAPLAKWKNDFSRAFQHYLDKSTPHPVHRWLGTLAVAAIYVLRVYYVQG 60

Query: 729 FYIVTYGLGIYVLNLLIGFLSPKVDPELEALDGAELPTKESDEFRPFIRRLPEFKFWYAI 550
           FYIV+YGLGIY+LNLLIGFLSPKVDPELE LDGA LPTK SDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 549 TKAFCVAFLMTFFSLFDIPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPLNIGKQTYT 370
           TKAFCVAFLMTFFS+FD+PVFWPILLCYW+VLFVLTMKRQIMHMIKYKYVP +IGKQ YT
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYVPFSIGKQRYT 180

Query: 369 GRRSAS---GSPRD 337
           G++SA+   G PRD
Sbjct: 181 GKKSAASSRGLPRD 194


>ref|XP_004152693.1| PREDICTED: protein RER1B-like [Cucumis sativus]
           gi|449496096|ref|XP_004160038.1| PREDICTED: protein
           RER1B-like [Cucumis sativus]
          Length = 194

 Score =  321 bits (823), Expect = 2e-85
 Identities = 148/188 (78%), Positives = 170/188 (90%)
 Frame = -2

Query: 909 MEGVLGEGATPLAPLANLKNDFSKLFQFYLDKSTPLPVHRWLGTLAVVMIYVLRVYLLQG 730
           MEGV G+ A+ +APLA  +NDFS+ FQ+YLD+STP PV RWLGTL V  IYVLRV+ +QG
Sbjct: 1   MEGVGGDTASAVAPLAKWRNDFSRAFQYYLDRSTPHPVQRWLGTLLVAAIYVLRVFYVQG 60

Query: 729 FYIVTYGLGIYVLNLLIGFLSPKVDPELEALDGAELPTKESDEFRPFIRRLPEFKFWYAI 550
           FY+V+YGLGIY+LNLLIGFLSPKVDPEL+ LDGA LPTK SDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYVVSYGLGIYILNLLIGFLSPKVDPELDVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 549 TKAFCVAFLMTFFSLFDIPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPLNIGKQTYT 370
           TKAFC+AFLMTFFSLFD+PVFWPILLCYW+VLFVLTMKRQIMHMIKYKY+P +IGKQ YT
Sbjct: 121 TKAFCIAFLMTFFSLFDVPVFWPILLCYWIVLFVLTMKRQIMHMIKYKYIPFSIGKQRYT 180

Query: 369 GRRSASGS 346
           G+RS++ S
Sbjct: 181 GKRSSASS 188


>ref|XP_002510410.1| rer1 protein, putative [Ricinus communis]
           gi|223551111|gb|EEF52597.1| rer1 protein, putative
           [Ricinus communis]
          Length = 194

 Score =  311 bits (796), Expect = 2e-82
 Identities = 144/188 (76%), Positives = 166/188 (88%)
 Frame = -2

Query: 909 MEGVLGEGATPLAPLANLKNDFSKLFQFYLDKSTPLPVHRWLGTLAVVMIYVLRVYLLQG 730
           MEG  G+  + +AP A  +N+FS+ FQ+YLD+STP P+ RWLGTLA   IY+LRVY  QG
Sbjct: 1   MEGAGGDTDSIVAPFAKWRNEFSRTFQYYLDRSTPYPMERWLGTLAASAIYMLRVYYAQG 60

Query: 729 FYIVTYGLGIYVLNLLIGFLSPKVDPELEALDGAELPTKESDEFRPFIRRLPEFKFWYAI 550
           FYIV+YGLGIY+LNLLIGFLSPKVDPELE LDGA LPTK SDEF+PFIRRLPEFKFWY+I
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYSI 120

Query: 549 TKAFCVAFLMTFFSLFDIPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPLNIGKQTYT 370
           TKAFCVAFLMTFFS+FD+PVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVP ++GKQ Y+
Sbjct: 121 TKAFCVAFLMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPFSVGKQRYS 180

Query: 369 GRRSASGS 346
           G++SA+ S
Sbjct: 181 GKKSAASS 188


>ref|XP_002300762.1| predicted protein [Populus trichocarpa] gi|222842488|gb|EEE80035.1|
           predicted protein [Populus trichocarpa]
          Length = 194

 Score =  307 bits (786), Expect = 3e-81
 Identities = 145/194 (74%), Positives = 167/194 (86%), Gaps = 3/194 (1%)
 Frame = -2

Query: 909 MEGVLGEGATPLAPLANLKNDFSKLFQFYLDKSTPLPVHRWLGTLAVVMIYVLRVYLLQG 730
           MEG  G+ A  + P+A  +NDFS+ FQ+YLD+STP P+ RWLGTLAV  IYVLRV+  QG
Sbjct: 1   MEGNGGDAANVVGPVAKWRNDFSRAFQYYLDRSTPHPMQRWLGTLAVAAIYVLRVFYAQG 60

Query: 729 FYIVTYGLGIYVLNLLIGFLSPKVDPELEALDGAELPTKESDEFRPFIRRLPEFKFWYAI 550
           FYIV+YGLGIY+LNLLIGFLSPKVDPELE LDGA LPTK SDEF+PFIRRLPEFKFWYAI
Sbjct: 61  FYIVSYGLGIYILNLLIGFLSPKVDPELEVLDGASLPTKGSDEFKPFIRRLPEFKFWYAI 120

Query: 549 TKAFCVAFLMTFFSLFDIPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPLNIGKQTYT 370
           TKAFCVAFLMTFFS+FD+PVFWPILLCYW+VLFVLTMKRQ+MHM+KYKYVP ++GKQ Y 
Sbjct: 121 TKAFCVAFLMTFFSIFDVPVFWPILLCYWIVLFVLTMKRQLMHMMKYKYVPFSLGKQRYG 180

Query: 369 GRR---SASGSPRD 337
            ++   S+SG  RD
Sbjct: 181 KKKSDASSSGLMRD 194


>gb|ABK25873.1| unknown [Picea sitchensis]
          Length = 192

 Score =  307 bits (786), Expect = 3e-81
 Identities = 144/193 (74%), Positives = 170/193 (88%), Gaps = 2/193 (1%)
 Frame = -2

Query: 909 MEGVLGEGATPLAPLANLKNDFSKLFQFYLDKSTPLPVHRWLGTLAVVMIYVLRVYLLQG 730
           MEGV  +G +P+  LA  +NDFS+ FQ+YLDKSTP PV RWLG+LA   IY+LRVY +QG
Sbjct: 1   MEGVTVDGGSPVG-LARWRNDFSRRFQYYLDKSTPHPVGRWLGSLAAATIYILRVYYVQG 59

Query: 729 FYIVTYGLGIYVLNLLIGFLSPKVDPELEALDGAELPTKESDEFRPFIRRLPEFKFWYAI 550
           FYIV+YGLGIYVLNLLIGFLSP+VDPE+E +DGA LPTK SDEF+PFIRRLPEFKFWY+I
Sbjct: 60  FYIVSYGLGIYVLNLLIGFLSPQVDPEMEGMDGASLPTKGSDEFKPFIRRLPEFKFWYSI 119

Query: 549 TKAFCVAFLMTFFSLFDIPVFWPILLCYWVVLFVLTMKRQIMHMIKYKYVPLNIGKQTYT 370
           TKAFC++F+MTFFS+FD+PVFWPILLCYWVVLFVLTMKRQI+HMIKYKYVP ++GKQ Y+
Sbjct: 120 TKAFCISFVMTFFSVFDVPVFWPILLCYWVVLFVLTMKRQILHMIKYKYVPFSLGKQRYS 179

Query: 369 GRRSA--SGSPRD 337
           G+RS   +GS RD
Sbjct: 180 GKRSTDKAGSSRD 192


Top