BLASTX nr result

ID: Bupleurum21_contig00004815 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004815
         (1238 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532039.1| Polysialic acid capsule expression protein k...   576   e-162
ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|1...   572   e-161
ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|2...   571   e-160
ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate is...   551   e-154
ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate is...   535   e-150

>ref|XP_002532039.1| Polysialic acid capsule expression protein kpsF, putative [Ricinus
            communis] gi|223528309|gb|EEF30355.1| Polysialic acid
            capsule expression protein kpsF, putative [Ricinus
            communis]
          Length = 340

 Score =  576 bits (1484), Expect = e-162
 Identities = 287/343 (83%), Positives = 317/343 (92%)
 Frame = -2

Query: 1162 MGSLPHSDLLLPTSNQETQINIDRNNLLNLFKSQQNYLNYFFQNLDLSQTLIFTQTLLNS 983
            MGSL   DL  P  + ++Q  ID+N LLNLFKSQQN+LNYFFQNLD+SQTL FTQTLLNS
Sbjct: 1    MGSL---DLPSPIPDPKSQSQIDQNTLLNLFKSQQNHLNYFFQNLDISQTLSFTQTLLNS 57

Query: 982  SGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILRNIDILVLFSKSGN 803
             GTI FTG+GKSGFVA KISQTLVSLGIRAGFLSPVDALHGDIGIL   DILV+FSKSGN
Sbjct: 58   RGTILFTGVGKSGFVANKISQTLVSLGIRAGFLSPVDALHGDIGILTPRDILVMFSKSGN 117

Query: 802  TEELLKLVPCVKAKGVYLISVTSLEGNALMSVCDLNVFLPLERELCPFDLAPVTSTAIQM 623
            T+ELL+LVPC KAKG +L+SVTS+EGNAL  V D+NV+LPLERELCPFDLAPVTSTAIQM
Sbjct: 118  TDELLRLVPCAKAKGAFLVSVTSVEGNALAMVSDMNVYLPLERELCPFDLAPVTSTAIQM 177

Query: 622  VFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQ 443
            VFGDT+AIA+MGARNLS+DEYAANHPAGRIGKSLIFKVKDVMKKQDELP+CKEGDLIMDQ
Sbjct: 178  VFGDTIAIALMGARNLSKDEYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQ 237

Query: 442  LVELTSKGCGCLLVVTDDYHLIGTFTDGDLRRTLKASGEGIFKMTVGEMCNRNPRTIGPD 263
            LVELTS+GCGCLLV+ ++YHLIGTFTDGDLRRTLKASGE IFK+TVGEMCNRNPRTIGPD
Sbjct: 238  LVELTSRGCGCLLVIDEEYHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPD 297

Query: 262  FMAVEAMQKMESPPSPVQFLPVVNQQNILIGIITLHGLVSAGL 134
             MAVEAM+KMESPPSPVQFLPV++Q+NI+IGI+TLHGLVSAGL
Sbjct: 298  AMAVEAMKKMESPPSPVQFLPVIDQKNIVIGIVTLHGLVSAGL 340


>ref|XP_002302040.1| predicted protein [Populus trichocarpa] gi|118483855|gb|ABK93818.1|
            unknown [Populus trichocarpa] gi|222843766|gb|EEE81313.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  572 bits (1474), Expect = e-161
 Identities = 289/343 (84%), Positives = 317/343 (92%)
 Frame = -2

Query: 1162 MGSLPHSDLLLPTSNQETQINIDRNNLLNLFKSQQNYLNYFFQNLDLSQTLIFTQTLLNS 983
            MGSLP S L LP+ N ++Q  ID+  LLNLFKSQQN+LNYFF+NLDLSQTL FTQTLL+ 
Sbjct: 1    MGSLPPS-LDLPSPNAKSQ-QIDQTTLLNLFKSQQNHLNYFFRNLDLSQTLTFTQTLLHC 58

Query: 982  SGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILRNIDILVLFSKSGN 803
            +GTIFF+G+GKSGFVA KISQTL+SLGIRAGFLSP+DALHGDIG L   DILVLFSKSGN
Sbjct: 59   NGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPLDALHGDIGALSASDILVLFSKSGN 118

Query: 802  TEELLKLVPCVKAKGVYLISVTSLEGNALMSVCDLNVFLPLERELCPFDLAPVTSTAIQM 623
            TEELL+LVPC KAKG YL+SVTS+EGNAL +VCDLNV LPLERELCPFDLAPVTSTAIQM
Sbjct: 119  TEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDLNVRLPLERELCPFDLAPVTSTAIQM 178

Query: 622  VFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQ 443
            VFGDTVAIA+MGARNLS++EYAANHPAGRIGKSLIFKVKDVMKKQ+ELPICKEGDLIMDQ
Sbjct: 179  VFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQ 238

Query: 442  LVELTSKGCGCLLVVTDDYHLIGTFTDGDLRRTLKASGEGIFKMTVGEMCNRNPRTIGPD 263
            LVELTSKGCGCLLV+ +++HLIGTFTDGDLRRTLKASGE IFK+TVGEMCNRNPRTIGPD
Sbjct: 239  LVELTSKGCGCLLVIDEEHHLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRNPRTIGPD 298

Query: 262  FMAVEAMQKMESPPSPVQFLPVVNQQNILIGIITLHGLVSAGL 134
             MAVEAM+KMESPPSPVQFLPV+   NILIGI+TLHGLVSAGL
Sbjct: 299  AMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>ref|XP_002306858.1| predicted protein [Populus trichocarpa] gi|222856307|gb|EEE93854.1|
            predicted protein [Populus trichocarpa]
          Length = 341

 Score =  571 bits (1471), Expect = e-160
 Identities = 289/343 (84%), Positives = 315/343 (91%)
 Frame = -2

Query: 1162 MGSLPHSDLLLPTSNQETQINIDRNNLLNLFKSQQNYLNYFFQNLDLSQTLIFTQTLLNS 983
            MGSLP   L LP+ + + Q  ID+  LLNLFKSQQN+LNYFFQNL+LSQ L FTQTLLN 
Sbjct: 1    MGSLPPF-LDLPSPDAKFQ-QIDQTTLLNLFKSQQNHLNYFFQNLNLSQALTFTQTLLNC 58

Query: 982  SGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILRNIDILVLFSKSGN 803
            +GTIFF+G+GKSGFVA KISQTL+SLGIRAGFLSPVDALHGDIG L + DILVLFSKSGN
Sbjct: 59   NGTIFFSGVGKSGFVANKISQTLISLGIRAGFLSPVDALHGDIGALSSSDILVLFSKSGN 118

Query: 802  TEELLKLVPCVKAKGVYLISVTSLEGNALMSVCDLNVFLPLERELCPFDLAPVTSTAIQM 623
            TEELL+LVPC KAKG YL+SVTS+EGNAL +VCD+NV LPLERELCPFDLAPVTSTAIQM
Sbjct: 119  TEELLRLVPCAKAKGAYLVSVTSVEGNALTAVCDMNVHLPLERELCPFDLAPVTSTAIQM 178

Query: 622  VFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQ 443
            VFGDTVAIA+MGARNLS++EYAANHPAGRIGKSLIFKVKDVMKKQ+ELPICKEGDLIMDQ
Sbjct: 179  VFGDTVAIALMGARNLSKEEYAANHPAGRIGKSLIFKVKDVMKKQNELPICKEGDLIMDQ 238

Query: 442  LVELTSKGCGCLLVVTDDYHLIGTFTDGDLRRTLKASGEGIFKMTVGEMCNRNPRTIGPD 263
            LVELTSKGCGCLLV+ +D HLIGTFTDGDLRRTLKASGEGIFK+TVGEMCNRNPRTIGPD
Sbjct: 239  LVELTSKGCGCLLVIDEDSHLIGTFTDGDLRRTLKASGEGIFKLTVGEMCNRNPRTIGPD 298

Query: 262  FMAVEAMQKMESPPSPVQFLPVVNQQNILIGIITLHGLVSAGL 134
             MAVEAM+KMESPPSPVQFLPV+   NILIGI+TLHGLVSAGL
Sbjct: 299  AMAVEAMKKMESPPSPVQFLPVIKDDNILIGIVTLHGLVSAGL 341


>ref|XP_004151988.1| PREDICTED: probable arabinose 5-phosphate isomerase-like [Cucumis
            sativus] gi|449524494|ref|XP_004169257.1| PREDICTED:
            probable arabinose 5-phosphate isomerase-like [Cucumis
            sativus]
          Length = 348

 Score =  551 bits (1420), Expect = e-154
 Identities = 276/348 (79%), Positives = 313/348 (89%), Gaps = 5/348 (1%)
 Frame = -2

Query: 1162 MGSLPHS-DLLLPTS----NQETQINIDRNNLLNLFKSQQNYLNYFFQNLDLSQTLIFTQ 998
            MGSLP S D+ L +S        Q +I+ + LLNLFKSQQN+LN+FFQNLDLSQTL FT 
Sbjct: 1    MGSLPSSSDISLSSSLFPEKSPNQTSINESTLLNLFKSQQNHLNFFFQNLDLSQTLKFTA 60

Query: 997  TLLNSSGTIFFTGIGKSGFVAQKISQTLVSLGIRAGFLSPVDALHGDIGILRNIDILVLF 818
            TLLNS GTIFF+G+GKSGFVA+KISQTLVSLGIR+ FLSP+DALHGDIGIL + D+LV+F
Sbjct: 61   TLLNSPGTIFFSGVGKSGFVARKISQTLVSLGIRSAFLSPLDALHGDIGILNSGDVLVMF 120

Query: 817  SKSGNTEELLKLVPCVKAKGVYLISVTSLEGNALMSVCDLNVFLPLERELCPFDLAPVTS 638
            SKSGNTEELL+LVPC +AKG +LI+VTS+EGN L  VCD+NV LPLERELCPFDLAPVTS
Sbjct: 121  SKSGNTEELLRLVPCARAKGAFLIAVTSVEGNVLGGVCDMNVHLPLERELCPFDLAPVTS 180

Query: 637  TAIQMVFGDTVAIAMMGARNLSRDEYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGD 458
            TAIQMVFGDTVAIA+MGARNL+++EYA NHPAGRIGKSLIF+VKDVMKKQ+ELP+CKEGD
Sbjct: 181  TAIQMVFGDTVAIALMGARNLTKEEYATNHPAGRIGKSLIFRVKDVMKKQNELPVCKEGD 240

Query: 457  LIMDQLVELTSKGCGCLLVVTDDYHLIGTFTDGDLRRTLKASGEGIFKMTVGEMCNRNPR 278
            LIMDQLVELTSKGCGCLLV+ D+Y LIGTFTDGDLRRTLKASGE IFK+TVGEMCNR PR
Sbjct: 241  LIMDQLVELTSKGCGCLLVIDDEYRLIGTFTDGDLRRTLKASGEAIFKLTVGEMCNRKPR 300

Query: 277  TIGPDFMAVEAMQKMESPPSPVQFLPVVNQQNILIGIITLHGLVSAGL 134
            TI P+ MAV+AM+KME+PPSPVQFLPV+NQQ ILIGI+TLHGLVSAGL
Sbjct: 301  TIDPEAMAVDAMKKMEAPPSPVQFLPVINQQTILIGIVTLHGLVSAGL 348


>ref|XP_002277616.1| PREDICTED: probable arabinose 5-phosphate isomerase [Vitis vinifera]
          Length = 340

 Score =  535 bits (1379), Expect = e-150
 Identities = 266/324 (82%), Positives = 293/324 (90%), Gaps = 2/324 (0%)
 Frame = -2

Query: 1099 IDRNNLLNLFKSQQNYLNYFFQNLDLSQTLIFTQTLLNSSGTIFFTGIGKSGFVAQKISQ 920
            I+   L+NLFK+QQ YLN+FF NLDL+QTLIFTQTLL   GTIFFTG+GKSGFVAQKISQ
Sbjct: 17   INTTELMNLFKTQQKYLNFFFHNLDLNQTLIFTQTLLKIEGTIFFTGVGKSGFVAQKISQ 76

Query: 919  TLVSLGIRAGFLSPVDALHGDIGILRN--IDILVLFSKSGNTEELLKLVPCVKAKGVYLI 746
            TLVSLGIRA FLSPVDALHGDIGIL     + +V FSKSGN+EELLKL PC KAKG YLI
Sbjct: 77   TLVSLGIRASFLSPVDALHGDIGILSGGTSNAVVFFSKSGNSEELLKLAPCAKAKGAYLI 136

Query: 745  SVTSLEGNALMSVCDLNVFLPLERELCPFDLAPVTSTAIQMVFGDTVAIAMMGARNLSRD 566
            SVTS E N L +VCDLNV LPLERELCPFDLAPVTST IQMVFGDTVA+A+MGARNL+RD
Sbjct: 137  SVTSTEDNLLRAVCDLNVHLPLERELCPFDLAPVTSTTIQMVFGDTVAVALMGARNLTRD 196

Query: 565  EYAANHPAGRIGKSLIFKVKDVMKKQDELPICKEGDLIMDQLVELTSKGCGCLLVVTDDY 386
            EYAANHPAGRIGKSLIFKVKDVMKKQDELP+CKEGDLIMDQLVELTSKGCGCLLV+ D+Y
Sbjct: 197  EYAANHPAGRIGKSLIFKVKDVMKKQDELPVCKEGDLIMDQLVELTSKGCGCLLVIDDEY 256

Query: 385  HLIGTFTDGDLRRTLKASGEGIFKMTVGEMCNRNPRTIGPDFMAVEAMQKMESPPSPVQF 206
             LIGTFTDGDLRRTLKASGEGIFK+TVG+MCNRNPRTI  + MAV+AM++ME+PPSPVQF
Sbjct: 257  RLIGTFTDGDLRRTLKASGEGIFKLTVGQMCNRNPRTISSNVMAVDAMRRMEAPPSPVQF 316

Query: 205  LPVVNQQNILIGIITLHGLVSAGL 134
            LPV++ QN+LIGI+TLHGLVSAGL
Sbjct: 317  LPVLDDQNVLIGIVTLHGLVSAGL 340


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