BLASTX nr result

ID: Bupleurum21_contig00004796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004796
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g0...   248   1e-63
gb|ACJ85012.1| unknown [Medicago truncatula]                          245   5e-63
ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|2...   242   4e-62
ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycin...   241   1e-61
gb|AFK43629.1| unknown [Lotus japonicus]                              239   5e-61

>ref|XP_002281596.1| PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Vitis vinifera]
           gi|298204451|emb|CBI16931.3| unnamed protein product
           [Vitis vinifera]
          Length = 225

 Score =  248 bits (632), Expect = 1e-63
 Identities = 126/192 (65%), Positives = 139/192 (72%), Gaps = 1/192 (0%)
 Frame = -1

Query: 679 FLCVYTALFRRGEEQTNSSAIQGTLXXXXXXXXXXXXXS-YRSPPRPLPYDAEARYFRLQ 503
           FL VYT+LFRRGE  +  S+IQG                 YRSPPRPLPYD + R FRLQ
Sbjct: 37  FLNVYTSLFRRGEVNSIPSSIQGAASLSSTTSLDDSLSDMYRSPPRPLPYDVDPRNFRLQ 96

Query: 502 RDGLVLRREKGSCHSQEEPDSIRSDTDADSEPLIISKKWNESTRDDGSKEPNSKSTIKLS 323
           RDGLV RREKGS HS EE + +RSDTD DSE LI   KWNES  DDGSKE   +S++K S
Sbjct: 97  RDGLVSRREKGSSHSHEESEPLRSDTDGDSESLITRDKWNES--DDGSKEQRPRSSVKHS 154

Query: 322 TGKSATGFAHIYSFSSDDEDVCPTCLEEYTSEDPKILTKCSHHFHLGCIYEWMERSENCP 143
             K+  G   IYS SS+DEDVCPTCLEEYT E+PKI+TKCSHHFHLGCIYEWMERSE CP
Sbjct: 155 MAKTTMGLGFIYS-SSEDEDVCPTCLEEYTPENPKIMTKCSHHFHLGCIYEWMERSETCP 213

Query: 142 VCGKEMAFDETT 107
           VCGK M FDETT
Sbjct: 214 VCGKVMMFDETT 225


>gb|ACJ85012.1| unknown [Medicago truncatula]
          Length = 229

 Score =  245 bits (626), Expect = 5e-63
 Identities = 121/191 (63%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = -1

Query: 676 LCVYTALFRRGEEQTNSSAIQGTLXXXXXXXXXXXXXS-YRSPPRPLPYDAEARYFRLQR 500
           L VY ++FRRGE  +  S++QGT                YRSPPRPLPYDAE R+FR QR
Sbjct: 38  LNVYASIFRRGEAHSVPSSLQGTASMTSAASLDNSLSDMYRSPPRPLPYDAEPRFFRSQR 97

Query: 499 DGLVLRREKGSCHSQEEPDSIRSDTDADSEPLIISKKWNESTRDDGSKEPNSKSTIKLST 320
           DGLV RREK S HS +E + +RSDTD D EPL  S+KWNE   +D SK   SKS +KLS+
Sbjct: 98  DGLVSRREKSSSHSNDETEPLRSDTDVDPEPLHSSEKWNECACEDESKIYRSKSALKLSS 157

Query: 319 GKSATGFAHIYSFSSDDEDVCPTCLEEYTSEDPKILTKCSHHFHLGCIYEWMERSENCPV 140
            K  TG   IY+ SS+DED+CPTCLEEYT E+PKI+TKCSHHFHLGCIYEWMERS+NCPV
Sbjct: 158 AKYTTGVGLIYA-SSEDEDICPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPV 216

Query: 139 CGKEMAFDETT 107
           CGKEM FDETT
Sbjct: 217 CGKEMDFDETT 227


>ref|XP_002330953.1| predicted protein [Populus trichocarpa] gi|222873147|gb|EEF10278.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  242 bits (618), Expect = 4e-62
 Identities = 117/191 (61%), Positives = 140/191 (73%)
 Frame = -1

Query: 679 FLCVYTALFRRGEEQTNSSAIQGTLXXXXXXXXXXXXXSYRSPPRPLPYDAEARYFRLQR 500
           FL VYT++FRRG+  +  S+IQG                YRSPPRPLPYDA+ R  RLQR
Sbjct: 37  FLHVYTSIFRRGQVHSVPSSIQGAASLTSSSLDNSLAEMYRSPPRPLPYDADPRCLRLQR 96

Query: 499 DGLVLRREKGSCHSQEEPDSIRSDTDADSEPLIISKKWNESTRDDGSKEPNSKSTIKLST 320
           DGLV RREKGS HS EE + +RSD DADSE      KWN S  + G KE +S+S++KLS+
Sbjct: 97  DGLVSRREKGSSHSHEESEPLRSDNDADSESFRTGDKWNASACE-GGKEQHSRSSLKLSS 155

Query: 319 GKSATGFAHIYSFSSDDEDVCPTCLEEYTSEDPKILTKCSHHFHLGCIYEWMERSENCPV 140
            K+  G  ++YS SS++EDVCPTCL+EYT EDPKI+TKCSHHFHLGCIYEWMERS++CPV
Sbjct: 156 AKATVGIGYVYS-SSEEEDVCPTCLDEYTPEDPKIMTKCSHHFHLGCIYEWMERSDSCPV 214

Query: 139 CGKEMAFDETT 107
           CGK M FDETT
Sbjct: 215 CGKVMVFDETT 225


>ref|NP_001240211.1| uncharacterized protein LOC100777068 [Glycine max]
           gi|255647555|gb|ACU24241.1| unknown [Glycine max]
          Length = 229

 Score =  241 bits (614), Expect = 1e-61
 Identities = 118/191 (61%), Positives = 140/191 (73%), Gaps = 1/191 (0%)
 Frame = -1

Query: 676 LCVYTALFRRGEEQTNSSAIQGTLXXXXXXXXXXXXXS-YRSPPRPLPYDAEARYFRLQR 500
           L VY+++FRRG+  +  S+IQG                 YRSPPRPLPYDAE RYFR QR
Sbjct: 38  LSVYSSIFRRGDAHSIPSSIQGAASITSAASLDNSLSDMYRSPPRPLPYDAEPRYFRSQR 97

Query: 499 DGLVLRREKGSCHSQEEPDSIRSDTDADSEPLIISKKWNESTRDDGSKEPNSKSTIKLST 320
           DGLV RREKGS HS EE + +RSD D D E L    KWNES  + GSKE +SKS+++L +
Sbjct: 98  DGLVSRREKGSSHSNEETEPLRSDADLDPESLNSGDKWNESACEAGSKEYHSKSSLRLQS 157

Query: 319 GKSATGFAHIYSFSSDDEDVCPTCLEEYTSEDPKILTKCSHHFHLGCIYEWMERSENCPV 140
            K +TG   +Y+ SS++EDVCPTCLEEYT E+PKI+TKCSHHFHLGCIYEWMERS+NCPV
Sbjct: 158 TKYSTGVGLVYA-SSEEEDVCPTCLEEYTKENPKIMTKCSHHFHLGCIYEWMERSDNCPV 216

Query: 139 CGKEMAFDETT 107
           CGK M FDETT
Sbjct: 217 CGKVMVFDETT 227


>gb|AFK43629.1| unknown [Lotus japonicus]
          Length = 229

 Score =  239 bits (609), Expect = 5e-61
 Identities = 118/191 (61%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
 Frame = -1

Query: 676 LCVYTALFRRGEEQTNSSAIQGTLXXXXXXXXXXXXXS-YRSPPRPLPYDAEARYFRLQR 500
           L VYT++FRRGE  +  S+IQGT                YRSPPRPLPYDAE RYFR QR
Sbjct: 38  LNVYTSIFRRGEVHSLPSSIQGTASMTSAASLDNSLSDLYRSPPRPLPYDAEPRYFRSQR 97

Query: 499 DGLVLRREKGSCHSQEEPDSIRSDTDADSEPLIISKKWNESTRDDGSKEPNSKSTIKLST 320
           DGLV RR+K S HS EE + +RSD + D E      KWN    DDGSKE  SKS +K+S+
Sbjct: 98  DGLVSRRDKSSSHSNEETEPLRSDVEVDPESFNSGDKWNGCAGDDGSKECRSKSALKISS 157

Query: 319 GKSATGFAHIYSFSSDDEDVCPTCLEEYTSEDPKILTKCSHHFHLGCIYEWMERSENCPV 140
            K  TG   IY+ SS++EDVCPTCLEEYT+E+PKI+TKCSHHFHLGCIYEWMERS+NCPV
Sbjct: 158 AKYTTGVGLIYA-SSEEEDVCPTCLEEYTTENPKIMTKCSHHFHLGCIYEWMERSDNCPV 216

Query: 139 CGKEMAFDETT 107
           CGK M FDE+T
Sbjct: 217 CGKVMLFDEST 227


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