BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004652
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit ...   508   e-141
ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_002529210.1| signalosome subunit, putative [Ricinus commu...   489   e-136
gb|AFK36185.1| unknown [Lotus japonicus]                              487   e-135
gb|AFK46238.1| unknown [Medicago truncatula]                          484   e-134

>ref|XP_002267156.1| PREDICTED: COP9 signalosome complex subunit 6a [Vitis vinifera]
            gi|296090054|emb|CBI39873.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  508 bits (1307), Expect = e-141
 Identities = 256/309 (82%), Positives = 273/309 (88%), Gaps = 8/309 (2%)
 Frame = +2

Query: 134  LTFKLHPLVIVNISDHYTRVKSQSLGPSPPANGDASA--------PPPRVFGCVIGVQRG 289
            LTFKLHPLVIVNISDHYTRVKSQ+  P   +NG   A        PPPRVFGCVIGVQRG
Sbjct: 9    LTFKLHPLVIVNISDHYTRVKSQTQPPHLSSNGGEGAAAAASPPPPPPRVFGCVIGVQRG 68

Query: 290  RTVEIFNSFELLYDESTQSLDRAFLLKKQELYKKVFPNFYILGWYSTGSDAQESDMIIHK 469
            RTVEIFNSFELLYD ST SLDR+FL KKQELYKKVFPNFYILGWYSTGSDAQESDM IHK
Sbjct: 69   RTVEIFNSFELLYDPSTHSLDRSFLEKKQELYKKVFPNFYILGWYSTGSDAQESDMHIHK 128

Query: 470  SLMDINESPVFVLLNPSIIHAQKDLPVTIFESELHIIDAIPQLIFVRSSYSIETVEAERI 649
            +LMDINESPV+VLLNPSI HAQKDLPVTI+ESELH+ID IPQLIFVR++Y+IETVEAERI
Sbjct: 129  ALMDINESPVYVLLNPSINHAQKDLPVTIYESELHVIDGIPQLIFVRANYTIETVEAERI 188

Query: 650  SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMEKGEMPCENXXX 829
            SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAM+KG++PCEN   
Sbjct: 189  SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMQKGDIPCENSLL 248

Query: 830  XXXXXXXXXXPAVESIKFQDDFLMDYNDTLLVSYLAMFTNCSSTMNELVDKFNTAYDRHS 1009
                      PA+ES KFQDDFLM+YNDTLL+SYLAMFTNCSSTMNELVDKFNTAYDRHS
Sbjct: 249  RQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMFTNCSSTMNELVDKFNTAYDRHS 308

Query: 1010 RRGGRSAFI 1036
            RRGGR+AFI
Sbjct: 309  RRGGRTAFI 317


>ref|XP_002330530.1| predicted protein [Populus trichocarpa] gi|222872088|gb|EEF09219.1|
            predicted protein [Populus trichocarpa]
          Length = 306

 Score =  498 bits (1282), Expect = e-138
 Identities = 250/301 (83%), Positives = 272/301 (90%)
 Frame = +2

Query: 134  LTFKLHPLVIVNISDHYTRVKSQSLGPSPPANGDASAPPPRVFGCVIGVQRGRTVEIFNS 313
            LTFKLHPLVIVNISDHYTRVKSQ+ G S   +G +++PPPRV+GCVIGVQRGRTVEIFNS
Sbjct: 9    LTFKLHPLVIVNISDHYTRVKSQTNGCS---DGGSASPPPRVYGCVIGVQRGRTVEIFNS 65

Query: 314  FELLYDESTQSLDRAFLLKKQELYKKVFPNFYILGWYSTGSDAQESDMIIHKSLMDINES 493
            FELLYD  T SLDRAF+ KKQELYKKVFP+FYILGWYSTGSDA+ESDM IHK+LMDINES
Sbjct: 66   FELLYDPVTHSLDRAFIEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIHKALMDINES 125

Query: 494  PVFVLLNPSIIHAQKDLPVTIFESELHIIDAIPQLIFVRSSYSIETVEAERISVDHVAHL 673
            PV+VLLNPSI  AQKDLPVTI+ESELH+ID IPQLIFV SSY+IETVEAERISVDHVAHL
Sbjct: 126  PVYVLLNPSINPAQKDLPVTIYESELHVIDGIPQLIFVCSSYTIETVEAERISVDHVAHL 185

Query: 674  KPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMEKGEMPCENXXXXXXXXXXX 853
            KPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYL+AM+KGE+PCEN           
Sbjct: 186  KPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLVAMQKGEIPCENSLLRQVSSLLR 245

Query: 854  XXPAVESIKFQDDFLMDYNDTLLVSYLAMFTNCSSTMNELVDKFNTAYDRHSRRGGRSAF 1033
              PA+ES KFQDDFLM+YNDTLL++YLAMFTNCSSTMNELVDKFNTAYDRHSRRGGR+AF
Sbjct: 246  RLPAIESEKFQDDFLMEYNDTLLIAYLAMFTNCSSTMNELVDKFNTAYDRHSRRGGRTAF 305

Query: 1034 I 1036
            I
Sbjct: 306  I 306


>ref|XP_002529210.1| signalosome subunit, putative [Ricinus communis]
            gi|223531328|gb|EEF33166.1| signalosome subunit, putative
            [Ricinus communis]
          Length = 318

 Score =  489 bits (1260), Expect = e-136
 Identities = 251/310 (80%), Positives = 268/310 (86%), Gaps = 9/310 (2%)
 Frame = +2

Query: 134  LTFKLHPLVIVNISDHYTRVKSQSLGP-SPPANGDA--------SAPPPRVFGCVIGVQR 286
            LTFKLHPLVIVNISDHYTRVKSQ   P +   NG +        S  PPRV+GCVIGVQR
Sbjct: 9    LTFKLHPLVIVNISDHYTRVKSQMNPPVTTTTNGGSDGGGENTVSLAPPRVYGCVIGVQR 68

Query: 287  GRTVEIFNSFELLYDESTQSLDRAFLLKKQELYKKVFPNFYILGWYSTGSDAQESDMIIH 466
            GRTVEIFNSFELLYD  T SLDRAFL KKQELYKKVFP+FYILGWYSTGSDA+ESDM IH
Sbjct: 69   GRTVEIFNSFELLYDPITHSLDRAFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIH 128

Query: 467  KSLMDINESPVFVLLNPSIIHAQKDLPVTIFESELHIIDAIPQLIFVRSSYSIETVEAER 646
            K+LMDINESPV+VLLNPSI  AQKDLPV I+ESELH+ID IPQLIFVRSSY+IETVEAER
Sbjct: 129  KALMDINESPVYVLLNPSINPAQKDLPVIIYESELHVIDGIPQLIFVRSSYTIETVEAER 188

Query: 647  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMEKGEMPCENXX 826
            ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYL AM+KGE+PCEN  
Sbjct: 189  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLAAMQKGEIPCENSL 248

Query: 827  XXXXXXXXXXXPAVESIKFQDDFLMDYNDTLLVSYLAMFTNCSSTMNELVDKFNTAYDRH 1006
                       PA+ES KFQDDFLM+YNDTLL++YLAMFTNCSSTMNELVDKFNTAYDRH
Sbjct: 249  LRQVSSLLRRLPAIESEKFQDDFLMEYNDTLLITYLAMFTNCSSTMNELVDKFNTAYDRH 308

Query: 1007 SRRGGRSAFI 1036
            SRRGGR+AFI
Sbjct: 309  SRRGGRTAFI 318


>gb|AFK36185.1| unknown [Lotus japonicus]
          Length = 317

 Score =  487 bits (1254), Expect = e-135
 Identities = 246/309 (79%), Positives = 269/309 (87%), Gaps = 8/309 (2%)
 Frame = +2

Query: 134  LTFKLHPLVIVNISDHYTRVKSQ--------SLGPSPPANGDASAPPPRVFGCVIGVQRG 289
            LTFKLHPLVIVNISDHYTRVKSQ        +  PS  A+G  S+ PPRV+GCVIGVQ+G
Sbjct: 9    LTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNSVPSNGADGVVSSVPPRVYGCVIGVQKG 68

Query: 290  RTVEIFNSFELLYDESTQSLDRAFLLKKQELYKKVFPNFYILGWYSTGSDAQESDMIIHK 469
            RTVEIFNSFELLYD ST SLDR FL KKQELYKKVFP+FYILGWYSTGSDA+ESDM IH+
Sbjct: 69   RTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMNIHR 128

Query: 470  SLMDINESPVFVLLNPSIIHAQKDLPVTIFESELHIIDAIPQLIFVRSSYSIETVEAERI 649
            +LMDINESPV+VLLNPSI H+QKDLPV+IFESELH+ID IPQLIFVRSSY+IETVEAERI
Sbjct: 129  ALMDINESPVYVLLNPSINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERI 188

Query: 650  SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMEKGEMPCENXXX 829
            SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKML+SRI+VLHHYLLAM+KG++PCEN   
Sbjct: 189  SVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLHSRIKVLHHYLLAMQKGDVPCENSLL 248

Query: 830  XXXXXXXXXXPAVESIKFQDDFLMDYNDTLLVSYLAMFTNCSSTMNELVDKFNTAYDRHS 1009
                      PA+ES KFQDDFLM YNDTLL+SYL M TNCSS MNELVDKFNTAYDRHS
Sbjct: 249  RQVSSLLRRLPAIESGKFQDDFLMGYNDTLLISYLTMLTNCSSAMNELVDKFNTAYDRHS 308

Query: 1010 RRGGRSAFI 1036
            RRGGR+AF+
Sbjct: 309  RRGGRTAFM 317


>gb|AFK46238.1| unknown [Medicago truncatula]
          Length = 318

 Score =  484 bits (1247), Expect = e-134
 Identities = 246/310 (79%), Positives = 270/310 (87%), Gaps = 9/310 (2%)
 Frame = +2

Query: 134  LTFKLHPLVIVNISDHYTRVKSQSLGPSPPAN------GD---ASAPPPRVFGCVIGVQR 286
            LTFKLHPLVIVNISDHYTRVKSQ      P N      GD   +S PPPRVFGCVIGVQ+
Sbjct: 9    LTFKLHPLVIVNISDHYTRVKSQMNPTLAPHNNATNNGGDGVVSSLPPPRVFGCVIGVQK 68

Query: 287  GRTVEIFNSFELLYDESTQSLDRAFLLKKQELYKKVFPNFYILGWYSTGSDAQESDMIIH 466
            GRTVEIFNSFELLYD ST SLDR FL KKQELYKKVFP+FYILGWYSTGSDA+ESDM IH
Sbjct: 69   GRTVEIFNSFELLYDPSTHSLDRPFLEKKQELYKKVFPHFYILGWYSTGSDAEESDMHIH 128

Query: 467  KSLMDINESPVFVLLNPSIIHAQKDLPVTIFESELHIIDAIPQLIFVRSSYSIETVEAER 646
            K+LMDINESPV+VLLNP+I H+QKDLPV+IFESELH+ID IPQLIFVRSSY+IETVEAER
Sbjct: 129  KALMDINESPVYVLLNPAINHSQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAER 188

Query: 647  ISVDHVAHLKPSDGGSAATQLAAHLTGIHSAIKMLNSRIRVLHHYLLAMEKGEMPCENXX 826
            ISVDHVAHLKPSDGGSAATQLAA+LTGIHSAIKML+SRI+VLHHYLLAMEKG++PCEN  
Sbjct: 189  ISVDHVAHLKPSDGGSAATQLAANLTGIHSAIKMLHSRIKVLHHYLLAMEKGDVPCENSL 248

Query: 827  XXXXXXXXXXXPAVESIKFQDDFLMDYNDTLLVSYLAMFTNCSSTMNELVDKFNTAYDRH 1006
                       PA+ES KFQDDFLM+YNDTLL+SYLAM TNCSS MN+LVDKF+TAYDRH
Sbjct: 249  LRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLISYLAMLTNCSSAMNDLVDKFSTAYDRH 308

Query: 1007 SRRGGRSAFI 1036
            +RRGGR+AF+
Sbjct: 309  TRRGGRTAFM 318