BLASTX nr result

ID: Bupleurum21_contig00004500 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004500
         (775 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZO...   129   7e-28
ref|XP_002327330.1| predicted protein [Populus trichocarpa] gi|2...   119   9e-25
ref|XP_002526844.1| hypothetical protein RCOM_0686820 [Ricinus c...   116   6e-24
gb|ADL36633.1| C2H2L domain class transcription factor [Malus x ...   109   6e-22
ref|XP_004139705.1| PREDICTED: protein SENSITIVE TO PROTON RHIZO...   103   5e-20

>ref|XP_002270196.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 1
           [Vitis vinifera] gi|359493099|ref|XP_003634509.1|
           PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1
           isoform 2 [Vitis vinifera]
           gi|359493101|ref|XP_003634510.1| PREDICTED: protein
           SENSITIVE TO PROTON RHIZOTOXICITY 1 isoform 3 [Vitis
           vinifera] gi|147859485|emb|CAN81435.1| hypothetical
           protein VITISV_010700 [Vitis vinifera]
          Length = 527

 Score =  129 bits (324), Expect = 7e-28
 Identities = 71/151 (47%), Positives = 98/151 (64%), Gaps = 2/151 (1%)
 Frame = -3

Query: 449 MDRQKRLCAAETWTKLPTPTQLELQKKVPPDQQFFINFS--SQRNMQKWDDPSIIDYSRR 276
           MD + RL + +TWT+  +        ++P DQQ F NFS   Q++  KW+DPS++DYS R
Sbjct: 1   MDLKDRL-SVDTWTQSSSSGN-----ELPKDQQSFTNFSLQQQQHQHKWEDPSVLDYSVR 54

Query: 275 IGEQFPEFSQPSRTPCTFTQENDNQMRIFGQLDGQMNGIRDAIRNSDWDPRVMLTNLSIM 96
           I   F EF+Q S T  +     ++Q++   + D QMN + +  R  DWDPRVML+NLS +
Sbjct: 55  IEPAFQEFNQTSATSSSLPCNPNSQIKNLNREDCQMNEMLEPNRIQDWDPRVMLSNLSFL 114

Query: 95  EQKIHQLQNLVHLIVGRRSEAVNGSEELAAQ 3
           EQKIHQLQ+LVHLIVGRRS+ +  + EL AQ
Sbjct: 115 EQKIHQLQDLVHLIVGRRSQVLGRTNELVAQ 145


>ref|XP_002327330.1| predicted protein [Populus trichocarpa] gi|222835700|gb|EEE74135.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  119 bits (297), Expect = 9e-25
 Identities = 60/139 (43%), Positives = 83/139 (59%)
 Frame = -3

Query: 419 ETWTKLPTPTQLELQKKVPPDQQFFINFSSQRNMQKWDDPSIIDYSRRIGEQFPEFSQPS 240
           + W   P+ +   L +K+  +   F NF+ Q+  QKWDD SI+DY  RI   F EF+Q S
Sbjct: 10  DAWAN-PSSSSNGLPRKMALENPSFTNFNLQQQEQKWDDTSILDYGIRIEPPFREFNQAS 68

Query: 239 RTPCTFTQENDNQMRIFGQLDGQMNGIRDAIRNSDWDPRVMLTNLSIMEQKIHQLQNLVH 60
            +    +   +NQ ++  Q DGQ N      +  DWDPR ML NLS +EQKIH LQ+LVH
Sbjct: 69  ESEYLLSSNCNNQPKVLDQEDGQNNEALQTSKLQDWDPRSMLNNLSFLEQKIHHLQDLVH 128

Query: 59  LIVGRRSEAVNGSEELAAQ 3
           LIVGR+ +A+ G ++L  Q
Sbjct: 129 LIVGRKGQALGGQDQLVTQ 147


>ref|XP_002526844.1| hypothetical protein RCOM_0686820 [Ricinus communis]
           gi|223533848|gb|EEF35579.1| hypothetical protein
           RCOM_0686820 [Ricinus communis]
          Length = 357

 Score =  116 bits (290), Expect = 6e-24
 Identities = 63/149 (42%), Positives = 90/149 (60%)
 Frame = -3

Query: 449 MDRQKRLCAAETWTKLPTPTQLELQKKVPPDQQFFINFSSQRNMQKWDDPSIIDYSRRIG 270
           MDR++RLC  ETW    + +   L + +  ++  F NFSSQ++ QKW+D +I  Y  R  
Sbjct: 1   MDRKERLCT-ETWAN-SSSSGSGLPEHLSTEKPSFANFSSQQDQQKWEDTAI--YGIRTD 56

Query: 269 EQFPEFSQPSRTPCTFTQENDNQMRIFGQLDGQMNGIRDAIRNSDWDPRVMLTNLSIMEQ 90
             F EF+ PS T        D+Q++I  + D  +N      +  DWDP+ ML+NLS +EQ
Sbjct: 57  PPFQEFNLPSETQTLLPSNPDDQIKIMDEEDSHINEALQINKIPDWDPKAMLSNLSFLEQ 116

Query: 89  KIHQLQNLVHLIVGRRSEAVNGSEELAAQ 3
           KIHQLQ+LVHLIVGRR + +   ++L AQ
Sbjct: 117 KIHQLQDLVHLIVGRRGQILERPDDLVAQ 145


>gb|ADL36633.1| C2H2L domain class transcription factor [Malus x domestica]
          Length = 527

 Score =  109 bits (273), Expect = 6e-22
 Identities = 53/139 (38%), Positives = 85/139 (61%)
 Frame = -3

Query: 419 ETWTKLPTPTQLELQKKVPPDQQFFINFSSQRNMQKWDDPSIIDYSRRIGEQFPEFSQPS 240
           +TW    T    ++   +  D   F NF+SQ++ ++W+ PS++DY  R+   F +F QPS
Sbjct: 9   DTWENPSTGN--DVTNTISSDHPSFTNFNSQQHQREWERPSVLDYEMRMEPSFLKFHQPS 66

Query: 239 RTPCTFTQENDNQMRIFGQLDGQMNGIRDAIRNSDWDPRVMLTNLSIMEQKIHQLQNLVH 60
            +  ++T  + N  +I  Q  G+M+ ++   +  DWD R+ L NL+ +EQKIHQLQ+LVH
Sbjct: 67  DSQTSYTCNSKNDTKIPDQEGGKMHEVQQPNKIQDWDARMTLNNLTFLEQKIHQLQDLVH 126

Query: 59  LIVGRRSEAVNGSEELAAQ 3
           +IVGRR + +   +EL AQ
Sbjct: 127 VIVGRRGQVLGRPDELVAQ 145


>ref|XP_004139705.1| PREDICTED: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like
           [Cucumis sativus] gi|449516603|ref|XP_004165336.1|
           PREDICTED: LOW QUALITY PROTEIN: protein SENSITIVE TO
           PROTON RHIZOTOXICITY 1-like [Cucumis sativus]
          Length = 512

 Score =  103 bits (256), Expect = 5e-20
 Identities = 58/149 (38%), Positives = 80/149 (53%)
 Frame = -3

Query: 449 MDRQKRLCAAETWTKLPTPTQLELQKKVPPDQQFFINFSSQRNMQKWDDPSIIDYSRRIG 270
           M+ +  LC++E WTK  +                F N + Q+  QKW D SI+DY+  + 
Sbjct: 1   MEPEDSLCSSEVWTKSSS----------------FPNGNVQQPPQKWPDTSILDYA--MD 42

Query: 269 EQFPEFSQPSRTPCTFTQENDNQMRIFGQLDGQMNGIRDAIRNSDWDPRVMLTNLSIMEQ 90
           + F EF + + +  + T   + Q+ I  +   QMN    A +  DWDPR ML NLS +EQ
Sbjct: 43  QPFQEFQEQTESKASLTCNPNQQIEILDKDSNQMNAALLASKIQDWDPRAMLNNLSFLEQ 102

Query: 89  KIHQLQNLVHLIVGRRSEAVNGSEELAAQ 3
           KIHQLQ LVHLIVGRR +     +EL  Q
Sbjct: 103 KIHQLQELVHLIVGRRGQVFGRPDELVVQ 131


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