BLASTX nr result

ID: Bupleurum21_contig00004479 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004479
         (416 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518102.1| conserved hypothetical protein [Ricinus comm...    96   3e-18
ref|XP_004139005.1| PREDICTED: receptor like protein kinase S.2-...    94   1e-17
ref|XP_002323983.1| predicted protein [Populus trichocarpa] gi|2...    92   4e-17
emb|CBI17319.3| unnamed protein product [Vitis vinifera]               86   3e-15
ref|XP_002266619.1| PREDICTED: receptor like protein kinase S.2-...    86   3e-15

>ref|XP_002518102.1| conserved hypothetical protein [Ricinus communis]
           gi|223542698|gb|EEF44235.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 836

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 59/131 (45%), Positives = 82/131 (62%), Gaps = 7/131 (5%)
 Frame = -1

Query: 374 MNHHHNLCFVLP--DEVDEDDEFINETPL----VTPSRESPSHRRRGFRVLEVLVHSSVY 213
           M   + LC +LP  DE+   D   ++  L    +T + ++  +R  G RVL   V  S+ 
Sbjct: 1   MKQLNRLCIILPELDELATYDHRQHKLKLPPSPLTEAMKTHPNRGCGTRVL-AFVGDSLR 59

Query: 212 RFFESKWIRIRRIRQPRKLPSS-VYLDTEGVQILEKFGGSSNPRNFSYSELYIGSKGFSK 36
           R ++S+W+     R+PRK  SS V+ D EG+Q+ EK GG  NPR FSY+ELYIGS GFS+
Sbjct: 60  RLYDSRWVSCYHHRRPRKQQSSNVFQDLEGIQMSEKVGGD-NPRIFSYAELYIGSNGFSE 118

Query: 35  DEILGSGGFGR 3
           DE+LGSGGFG+
Sbjct: 119 DEVLGSGGFGK 129


>ref|XP_004139005.1| PREDICTED: receptor like protein kinase S.2-like [Cucumis sativus]
           gi|449522682|ref|XP_004168355.1| PREDICTED: receptor
           like protein kinase S.2-like [Cucumis sativus]
          Length = 826

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 52/124 (41%), Positives = 74/124 (59%), Gaps = 2/124 (1%)
 Frame = -1

Query: 368 HHHNLCFVLPDEVDEDDEFINETPLVTPSRESPSHRRRG-FRVLEVLVHSSVYRFFESKW 192
           H + LC +LP + DE      E  L  P++ +  H     +  +   +  S+++F   KW
Sbjct: 2   HLNRLCLLLPADFDEVQPLDREDHLQKPNQNTNKHHTPDCWSQIHTFLRDSLFKFQTLKW 61

Query: 191 IRIRRI-RQPRKLPSSVYLDTEGVQILEKFGGSSNPRNFSYSELYIGSKGFSKDEILGSG 15
           +      R+PRK P   + DT+GVQ+ EK GG  NPR FS++ELYIG+KGFS +EILGSG
Sbjct: 62  VHSCCYGRRPRKPPPFDFHDTDGVQLSEKVGGD-NPRIFSFAELYIGTKGFSAEEILGSG 120

Query: 14  GFGR 3
           GFG+
Sbjct: 121 GFGK 124


>ref|XP_002323983.1| predicted protein [Populus trichocarpa] gi|222866985|gb|EEF04116.1|
           predicted protein [Populus trichocarpa]
          Length = 831

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 54/121 (44%), Positives = 74/121 (61%), Gaps = 4/121 (3%)
 Frame = -1

Query: 353 CFVLPDEVDEDDEFINETPLVTPSRESPSHRRR----GFRVLEVLVHSSVYRFFESKWIR 186
           C +LP++ +E   F  + P + P       +R+    G ++L VL   S+ R  ESKWI 
Sbjct: 7   CIILPEDFEEIKPF--DQPQIRPPVHDDVKKRQHCGCGRQILHVL-GDSLRRLHESKWIG 63

Query: 185 IRRIRQPRKLPSSVYLDTEGVQILEKFGGSSNPRNFSYSELYIGSKGFSKDEILGSGGFG 6
             +  +P K  S  + D EG+QI EK GG  NPR FSY+ELYIGSKGF ++E+LGSGGFG
Sbjct: 64  CFQDDKPSKQQSGPFHDLEGIQISEKVGGD-NPRIFSYAELYIGSKGFCENEVLGSGGFG 122

Query: 5   R 3
           +
Sbjct: 123 K 123


>emb|CBI17319.3| unnamed protein product [Vitis vinifera]
          Length = 706

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
 Frame = -1

Query: 362 HNLCFVLPDEVDEDDEFINETPLVTPSRESPSHRRR---GFRVLEVLVHSSVYRFFESKW 192
           + +CF+LP E+++     +    V+  +++P+  R    G +VL +L H  + RF + KW
Sbjct: 5   NRICFILPPELNDIHPLDHH---VSTEKQNPNRGRGRGCGTQVLAILQHF-LSRFHDLKW 60

Query: 191 IRIRRIRQPRKLPSSVYLDTEGVQILEKFGGSSNPRNFSYSELYIGSKGFSKDEILGSGG 12
                     K  S V+ D EGV + +K    +NPR FS+SELYIGS GF +DE+LGSGG
Sbjct: 61  TSFCHCHPLTKQASEVFHDMEGVHVSDKVVAGNNPRIFSFSELYIGSNGFCEDEVLGSGG 120

Query: 11  FGR 3
           FG+
Sbjct: 121 FGK 123


>ref|XP_002266619.1| PREDICTED: receptor like protein kinase S.2-like [Vitis vinifera]
          Length = 827

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 48/123 (39%), Positives = 72/123 (58%), Gaps = 3/123 (2%)
 Frame = -1

Query: 362 HNLCFVLPDEVDEDDEFINETPLVTPSRESPSHRRR---GFRVLEVLVHSSVYRFFESKW 192
           + +CF+LP E+++     +    V+  +++P+  R    G +VL +L H  + RF + KW
Sbjct: 5   NRICFILPPELNDIHPLDHH---VSTEKQNPNRGRGRGCGTQVLAILQHF-LSRFHDLKW 60

Query: 191 IRIRRIRQPRKLPSSVYLDTEGVQILEKFGGSSNPRNFSYSELYIGSKGFSKDEILGSGG 12
                     K  S V+ D EGV + +K    +NPR FS+SELYIGS GF +DE+LGSGG
Sbjct: 61  TSFCHCHPLTKQASEVFHDMEGVHVSDKVVAGNNPRIFSFSELYIGSNGFCEDEVLGSGG 120

Query: 11  FGR 3
           FG+
Sbjct: 121 FGK 123