BLASTX nr result

ID: Bupleurum21_contig00004462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004462
         (479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]                  66   3e-09
ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like,...    65   4e-09
ref|XP_003577818.1| PREDICTED: uncharacterized protein LOC100846...    65   6e-09
ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatu...    65   7e-09
ref|XP_002301507.1| predicted protein [Populus trichocarpa] gi|2...    65   7e-09

>dbj|BAA96072.1| ribosomal protein L29 [Panax ginseng]
          Length = 61

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 30/34 (88%), Positives = 31/34 (91%)
 Frame = +3

Query: 312 MAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           MAKSKNHTAHNQS KAHRNGIKKPRK R+ STRG
Sbjct: 1   MAKSKNHTAHNQSHKAHRNGIKKPRKHRHTSTRG 34


>ref|XP_004173787.1| PREDICTED: 60S ribosomal protein L29-1-like, partial [Cucumis
           sativus]
          Length = 85

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 309 EMAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           EMAKSKNHTAHNQS KAH+NGIKKPRK R+ ST+G
Sbjct: 24  EMAKSKNHTAHNQSHKAHKNGIKKPRKHRHTSTKG 58


>ref|XP_003577818.1| PREDICTED: uncharacterized protein LOC100846456 [Brachypodium
           distachyon]
          Length = 144

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 29/35 (82%), Positives = 32/35 (91%)
 Frame = +3

Query: 309 EMAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           EMAKSKNHTAHNQS KAHRNGIKKP++QR  ST+G
Sbjct: 84  EMAKSKNHTAHNQSYKAHRNGIKKPKRQRQTSTKG 118


>ref|XP_003609753.1| 60S ribosomal protein L29 [Medicago truncatula]
           gi|355510808|gb|AES91950.1| 60S ribosomal protein L29
           [Medicago truncatula]
          Length = 445

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/48 (68%), Positives = 39/48 (81%), Gaps = 1/48 (2%)
 Frame = +3

Query: 273 KNPNSLTW*KSE-EMAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           KNP+S     SE EMAKSKNHTAHNQS KAH+NGIKKP++ R+ ST+G
Sbjct: 125 KNPSSTA--SSELEMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKG 170



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 27/35 (77%), Positives = 32/35 (91%)
 Frame = +3

Query: 309 EMAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           EMAKSKNHTAHNQS KAH+NGIKKP++ R+ ST+G
Sbjct: 384 EMAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKG 418


>ref|XP_002301507.1| predicted protein [Populus trichocarpa] gi|222843233|gb|EEE80780.1|
           predicted protein [Populus trichocarpa]
          Length = 59

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 29/34 (85%), Positives = 32/34 (94%)
 Frame = +3

Query: 312 MAKSKNHTAHNQSRKAHRNGIKKPRKQRNISTRG 413
           MAKSKNHTAHNQS KAH+NGIKKPRKQR+ ST+G
Sbjct: 1   MAKSKNHTAHNQSYKAHKNGIKKPRKQRHTSTKG 34


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