BLASTX nr result

ID: Bupleurum21_contig00004444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004444
         (1095 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   576   e-162
ref|XP_002523427.1| centromere/microtubule binding protein cbf5,...   574   e-161
ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2...   574   e-161
ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonu...   572   e-161
ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex s...   572   e-161

>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score =  576 bits (1485), Expect = e-162
 Identities = 282/300 (94%), Positives = 293/300 (97%)
 Frame = -3

Query: 901 IKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVMNLDKP 722
           IKPQ+FTP IDTSQWPILLKNYDRLNVRTGHYTPLPSG+SPLKRPLAEYIRYG+MNLDKP
Sbjct: 37  IKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRYGIMNLDKP 96

Query: 721 ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 542
           ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA
Sbjct: 97  ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 156

Query: 541 RLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVFW 362
           RLH  V D AKVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA++HLVVFW
Sbjct: 157 RLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVFW 216

Query: 361 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVFDNFR 182
           ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGI+GEKDNMVTMHDVMDAQWV+DN+R
Sbjct: 217 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYR 276

Query: 181 DESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 2
           DESYLRR IMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+E GEEVVLMT
Sbjct: 277 DESYLRRAIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMT 336


>ref|XP_002523427.1| centromere/microtubule binding protein cbf5, putative [Ricinus
           communis] gi|223537377|gb|EEF39006.1|
           centromere/microtubule binding protein cbf5, putative
           [Ricinus communis]
          Length = 581

 Score =  574 bits (1480), Expect = e-161
 Identities = 282/300 (94%), Positives = 291/300 (97%)
 Frame = -3

Query: 901 IKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVMNLDKP 722
           IKPQSFTPP DTS WPILLKNYDRLNVRTGHYTPLPSG+SPLKRPLAEYIRYGVMNLDKP
Sbjct: 18  IKPQSFTPPNDTSNWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRYGVMNLDKP 77

Query: 721 ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 542
           ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVC+A
Sbjct: 78  ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVA 137

Query: 541 RLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVFW 362
           RLH  V D AKVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYD ++HLVVFW
Sbjct: 138 RLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVFW 197

Query: 361 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVFDNFR 182
           ISCEAGTYVRTMCVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDAQWVFDN+R
Sbjct: 198 ISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVFDNYR 257

Query: 181 DESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 2
           DE+YLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVE GEEVVLMT
Sbjct: 258 DETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEAGEEVVLMT 317


>ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score =  574 bits (1479), Expect = e-161
 Identities = 280/300 (93%), Positives = 292/300 (97%)
 Frame = -3

Query: 901 IKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVMNLDKP 722
           IKPQ+FTP IDTSQWPILLKNYDRLNVRTGHYTPLP G+SPLKRPLAEYIRYGVMNLDKP
Sbjct: 25  IKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPCGHSPLKRPLAEYIRYGVMNLDKP 84

Query: 721 ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 542
           ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA
Sbjct: 85  ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 144

Query: 541 RLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVFW 362
           RLH  ++D  KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA+KHLVVFW
Sbjct: 145 RLHDKIADVTKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFW 204

Query: 361 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVFDNFR 182
           ISCEAGTYVRTMCVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDAQWV+DN+R
Sbjct: 205 ISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNYR 264

Query: 181 DESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 2
           DESYLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+E GEEVVLMT
Sbjct: 265 DESYLRRVIMPLEVILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLMT 324


>ref|XP_004157453.1| PREDICTED: LOW QUALITY PROTEIN: H/ACA ribonucleoprotein complex
           subunit 4-like [Cucumis sativus]
          Length = 566

 Score =  572 bits (1475), Expect = e-161
 Identities = 277/300 (92%), Positives = 292/300 (97%)
 Frame = -3

Query: 901 IKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVMNLDKP 722
           IKPQSFTPP+DTSQWPILLKNYDRLNVRTGHYTPLPSGY PLKRPLAEYIRYG++NLDKP
Sbjct: 26  IKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKP 85

Query: 721 ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 542
           ANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVC+A
Sbjct: 86  ANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVA 145

Query: 541 RLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVFW 362
           RLHS V D +KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA+KHLVVFW
Sbjct: 146 RLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFW 205

Query: 361 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVFDNFR 182
           ISCEAGTYVRT+CVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDAQW +DNF+
Sbjct: 206 ISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFK 265

Query: 181 DESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 2
           DESYLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+  GEEVVLMT
Sbjct: 266 DESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMT 325


>ref|XP_004137598.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like, partial
           [Cucumis sativus]
          Length = 564

 Score =  572 bits (1475), Expect = e-161
 Identities = 277/300 (92%), Positives = 292/300 (97%)
 Frame = -3

Query: 901 IKPQSFTPPIDTSQWPILLKNYDRLNVRTGHYTPLPSGYSPLKRPLAEYIRYGVMNLDKP 722
           IKPQSFTPP+DTSQWPILLKNYDRLNVRTGHYTPLPSGY PLKRPLAEYIRYG++NLDKP
Sbjct: 26  IKPQSFTPPVDTSQWPILLKNYDRLNVRTGHYTPLPSGYLPLKRPLAEYIRYGILNLDKP 85

Query: 721 ANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCIA 542
           ANPSSHEVVAWIKRILRV+KTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVC+A
Sbjct: 86  ANPSSHEVVAWIKRILRVDKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCVA 145

Query: 541 RLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVFW 362
           RLHS V D +KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA+KHLVVFW
Sbjct: 146 RLHSAVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVFW 205

Query: 361 ISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVFDNFR 182
           ISCEAGTYVRT+CVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDAQW +DNF+
Sbjct: 206 ISCEAGTYVRTLCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWFYDNFK 265

Query: 181 DESYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLMT 2
           DESYLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+  GEEVVLMT
Sbjct: 266 DESYLRRVIMPLEVVLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIGAGEEVVLMT 325


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