BLASTX nr result

ID: Bupleurum21_contig00004443 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004443
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523427.1| centromere/microtubule binding protein cbf5,...   573   e-161
ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|2...   572   e-161
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   570   e-160
ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|2...   570   e-160
ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s...   568   e-160

>ref|XP_002523427.1| centromere/microtubule binding protein cbf5, putative [Ricinus
            communis] gi|223537377|gb|EEF39006.1|
            centromere/microtubule binding protein cbf5, putative
            [Ricinus communis]
          Length = 581

 Score =  573 bits (1476), Expect = e-161
 Identities = 281/308 (91%), Positives = 292/308 (94%)
 Frame = +3

Query: 156  NNNNDRELIKPQSFTPPIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLMEYIRY 335
            +   D  +IKPQSFTPP DTS WPILLKNYDRLNVRTGHYTPLPSG SPLKRPL EYIRY
Sbjct: 10   DQEQDLTMIKPQSFTPPNDTSNWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRY 69

Query: 336  GVMNLDKPSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGA 515
            GVMNLDKP+NPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGA
Sbjct: 70   GVMNLDKPANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGA 129

Query: 516  GKEYVCIARLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDA 695
            GKEYVC+ARLH  V D AKVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYD 
Sbjct: 130  GKEYVCVARLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDP 189

Query: 696  EKHLVVFWISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDA 875
            ++HLVVFWISCEAGTYVRTMCVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDA
Sbjct: 190  DRHLVVFWISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDA 249

Query: 876  QWVYDNFRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEV 1055
            QWV+DN+RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVE 
Sbjct: 250  QWVFDNYRDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEA 309

Query: 1056 GEEVVLMT 1079
            GEEVVLMT
Sbjct: 310  GEEVVLMT 317


>ref|XP_002308911.1| predicted protein [Populus trichocarpa] gi|222854887|gb|EEE92434.1|
            predicted protein [Populus trichocarpa]
          Length = 593

 Score =  572 bits (1474), Expect = e-161
 Identities = 279/301 (92%), Positives = 292/301 (97%)
 Frame = +3

Query: 177  LIKPQSFTPPIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLMEYIRYGVMNLDK 356
            +IKPQ+FTP IDTS+WPILLKNYDRLNVRTGHYTPLPSG SPLKRPL EYIRYG+MNLDK
Sbjct: 36   MIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPSGHSPLKRPLAEYIRYGIMNLDK 95

Query: 357  PSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 536
            P+NPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI
Sbjct: 96   PANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 155

Query: 537  ARLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVF 716
            ARLH  V D AKVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA++HLVVF
Sbjct: 156  ARLHDKVPDVAKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADRHLVVF 215

Query: 717  WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNF 896
            WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGI+GEKDNMVTMHDVMDAQWVYDN+
Sbjct: 216  WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNY 275

Query: 897  RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLM 1076
            RDE+YLRR IMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+E GEEVVLM
Sbjct: 276  RDESYLRRAIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLM 335

Query: 1077 T 1079
            T
Sbjct: 336  T 336


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
            max]
          Length = 589

 Score =  570 bits (1468), Expect = e-160
 Identities = 272/301 (90%), Positives = 295/301 (98%)
 Frame = +3

Query: 177  LIKPQSFTPPIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLMEYIRYGVMNLDK 356
            +IKPQSFTPPIDTS+WPILLKNY+RLNVRTGHYTP+PSG+SPLKRPL EY++YGV+NLDK
Sbjct: 34   MIKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLAEYLKYGVLNLDK 93

Query: 357  PSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 536
            P+NPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI
Sbjct: 94   PANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 153

Query: 537  ARLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVF 716
            ARLHS V D +KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYD ++HLVVF
Sbjct: 154  ARLHSDVPDVSKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVF 213

Query: 717  WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNF 896
            WISCEAGTYVRTMCVHLGL+LGVG+HMQELRRVRSGIMGEKDNMV+MHDVMDAQWVYDN+
Sbjct: 214  WISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNY 273

Query: 897  RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLM 1076
            RDETYLRRV+MPLE+LLTSYKRLVVKDSAVNAICYGAK MIPGLLRFEND++VGEEVVLM
Sbjct: 274  RDETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLM 333

Query: 1077 T 1079
            T
Sbjct: 334  T 334


>ref|XP_002323264.1| predicted protein [Populus trichocarpa] gi|222867894|gb|EEF05025.1|
            predicted protein [Populus trichocarpa]
          Length = 482

 Score =  570 bits (1468), Expect = e-160
 Identities = 277/301 (92%), Positives = 291/301 (96%)
 Frame = +3

Query: 177  LIKPQSFTPPIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLMEYIRYGVMNLDK 356
            +IKPQ+FTP IDTS+WPILLKNYDRLNVRTGHYTPLP G SPLKRPL EYIRYGVMNLDK
Sbjct: 24   MIKPQNFTPTIDTSQWPILLKNYDRLNVRTGHYTPLPCGHSPLKRPLAEYIRYGVMNLDK 83

Query: 357  PSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 536
            P+NPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI
Sbjct: 84   PANPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 143

Query: 537  ARLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVF 716
            ARLH  ++D  KVARALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYDA+KHLVVF
Sbjct: 144  ARLHDKIADVTKVARALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDADKHLVVF 203

Query: 717  WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNF 896
            WISCEAGTYVRTMCVHLGLILGVG HMQELRRVRSGI+GEKDNMVTMHDVMDAQWVYDN+
Sbjct: 204  WISCEAGTYVRTMCVHLGLILGVGGHMQELRRVRSGILGEKDNMVTMHDVMDAQWVYDNY 263

Query: 897  RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLM 1076
            RDE+YLRRVIMPLEV+LTSYKRLVVKDSAVNAICYGAKLMIPGLLRFEND+E GEEVVLM
Sbjct: 264  RDESYLRRVIMPLEVILTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDIEAGEEVVLM 323

Query: 1077 T 1079
            T
Sbjct: 324  T 324


>ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
            max]
          Length = 555

 Score =  568 bits (1465), Expect = e-160
 Identities = 271/301 (90%), Positives = 295/301 (98%)
 Frame = +3

Query: 177  LIKPQSFTPPIDTSEWPILLKNYDRLNVRTGHYTPLPSGFSPLKRPLMEYIRYGVMNLDK 356
            +IKPQSFTPPIDTS+WPILLKNY+RLNVRTGHYTP+PSG+SPLKRPL EY++YGV+NLDK
Sbjct: 1    MIKPQSFTPPIDTSQWPILLKNYERLNVRTGHYTPIPSGYSPLKRPLSEYLKYGVLNLDK 60

Query: 357  PSNPSSHEVVAWIKRILRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 536
            P+NPSSHEVVAWIKR+LRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI
Sbjct: 61   PANPSSHEVVAWIKRLLRVEKTGHSGTLDPKVTGNLIVCIDRATRLVKSQQGAGKEYVCI 120

Query: 537  ARLHSGVSDAAKVARALESLTGAVFQRPPLISAVKRQLRIRTIYESKMLEYDAEKHLVVF 716
            ARLHS V D +KV+RALE+LTGAVFQRPPLISAVKRQLRIRTIYESK+LEYD ++HLVVF
Sbjct: 121  ARLHSAVPDISKVSRALETLTGAVFQRPPLISAVKRQLRIRTIYESKLLEYDPDRHLVVF 180

Query: 717  WISCEAGTYVRTMCVHLGLILGVGAHMQELRRVRSGIMGEKDNMVTMHDVMDAQWVYDNF 896
            WISCEAGTYVRTMCVHLGL+LGVG+HMQELRRVRSGIMGEKDNMV+MHDVMDAQWVYDN+
Sbjct: 181  WISCEAGTYVRTMCVHLGLLLGVGSHMQELRRVRSGIMGEKDNMVSMHDVMDAQWVYDNY 240

Query: 897  RDETYLRRVIMPLEVLLTSYKRLVVKDSAVNAICYGAKLMIPGLLRFENDVEVGEEVVLM 1076
            RDETYLRRV+MPLE+LLTSYKRLVVKDSAVNAICYGAK MIPGLLRFEND++VGEEVVLM
Sbjct: 241  RDETYLRRVVMPLEILLTSYKRLVVKDSAVNAICYGAKFMIPGLLRFENDIDVGEEVVLM 300

Query: 1077 T 1079
            T
Sbjct: 301  T 301


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