BLASTX nr result
ID: Bupleurum21_contig00004426
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00004426
(1380 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis v... 235 2e-59
emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera] 234 3e-59
ref|XP_002517675.1| eukaryotic translation initiation factor 3 s... 194 6e-47
ref|XP_004136091.1| PREDICTED: clustered mitochondria protein ho... 173 8e-41
ref|XP_004158818.1| PREDICTED: clustered mitochondria protein ho... 172 1e-40
>ref|XP_003632816.1| PREDICTED: protein KIAA0664 homolog [Vitis vinifera]
Length = 1702
Score = 235 bits (600), Expect = 2e-59
Identities = 130/257 (50%), Positives = 166/257 (64%), Gaps = 1/257 (0%)
Frame = +3
Query: 9 SGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVAVAPPGTVLKPLLEK 188
SGED K Q K+ VSKIS+ + + YKEVAVAPPGT+LKPLLEK
Sbjct: 1298 SGEDLNKPQAKTPVSKISSAPATLTAMASKSVS--------YKEVAVAPPGTILKPLLEK 1349
Query: 189 VEDIKEVKTDTQIFHS-PSEKLKENGITKITLEEAIPDDKASKEVDVXXXXXXXXXXXXX 365
VE+ E KT+ Q+ ++ + K +E+ + +EEA+PDD+ +K
Sbjct: 1350 VEEKTEEKTEIQMSNTLETSKGEESDKVMVEVEEAVPDDEDTK----GSADGSVTESEKP 1405
Query: 366 XXXVGKVEDSGNEDNSVETNGSKLSAAAEPFSPGGFPLTHPLTSVPVTSVYDVIASQGML 545
+V +++ +ETNGSKLSAAA PF+PG L H L+S VTSVYDV ASQGML
Sbjct: 1406 ASEPEEVSSPDDQEKPMETNGSKLSAAAPPFNPGAHSLIHTLSSAAVTSVYDVTASQGML 1465
Query: 546 AEPVGFPPLAARVPCGPRSPLYYRMSHSMRIKHGYMKYQIPPMERSGFGSSGIMNPHAPE 725
AEP+ PP+AARVPCGPRSPLYYR ++S RIK+GY+KYQ P + RSGFG S IMNPHAPE
Sbjct: 1466 AEPMELPPVAARVPCGPRSPLYYRTNNSFRIKNGYLKYQNPVIGRSGFGPSRIMNPHAPE 1525
Query: 726 FVPKKAWSTNPVSEDSE 776
FVP++AW T + DS+
Sbjct: 1526 FVPRRAWQTKTANADSQ 1542
Score = 63.2 bits (152), Expect = 2e-07
Identities = 33/50 (66%), Positives = 42/50 (84%)
Frame = +1
Query: 928 DAEKAELARQILLSFIVKSVQHSSDPVSQSPVTQTRSEFTENPSEAIAND 1077
D+EK+ELARQILLSFIVKSVQH+ DP S++ V + + E+T + SEAIAND
Sbjct: 1582 DSEKSELARQILLSFIVKSVQHNLDPPSEAAVNE-KHEYTGSSSEAIAND 1630
Score = 57.8 bits (138), Expect = 7e-06
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 1217 VVTKRRRNRQHFTSGVNGLYNRQSISASVR 1306
VVTKRRRNRQHFT+GVNGLYN+QSI ASVR
Sbjct: 1673 VVTKRRRNRQHFTNGVNGLYNQQSICASVR 1702
>emb|CAN72877.1| hypothetical protein VITISV_010381 [Vitis vinifera]
Length = 1658
Score = 234 bits (598), Expect = 3e-59
Identities = 130/257 (50%), Positives = 166/257 (64%), Gaps = 1/257 (0%)
Frame = +3
Query: 9 SGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVAVAPPGTVLKPLLEK 188
SGED K Q K+ VSKIS+ + + YKEVAVAPPGT+LKPLLEK
Sbjct: 1254 SGEDLNKPQAKTPVSKISSAPATLTAMASKSVS--------YKEVAVAPPGTILKPLLEK 1305
Query: 189 VEDIKEVKTDTQIFHS-PSEKLKENGITKITLEEAIPDDKASKEVDVXXXXXXXXXXXXX 365
VE+ E KT+ Q+ ++ + K +E+ + +EEA+PDD+ +K
Sbjct: 1306 VEEKTEEKTEIQMSNTLETSKGEESDKVMVEVEEAVPDDEDTK----GSADGSVTESEKP 1361
Query: 366 XXXVGKVEDSGNEDNSVETNGSKLSAAAEPFSPGGFPLTHPLTSVPVTSVYDVIASQGML 545
+V +++ +ETNGSKLSAAA PF+PG L H L+S VTSVYDV ASQGML
Sbjct: 1362 ASEPEEVSSPDDQEKPMETNGSKLSAAAPPFNPGAHSLIHTLSSAAVTSVYDVTASQGML 1421
Query: 546 AEPVGFPPLAARVPCGPRSPLYYRMSHSMRIKHGYMKYQIPPMERSGFGSSGIMNPHAPE 725
AEP+ PP+AARVPCGPRSPLYYR ++S RIK+GY+KYQ P + RSGFG S IMNPHAPE
Sbjct: 1422 AEPMELPPVAARVPCGPRSPLYYRTNNSFRIKNGYLKYQNPVIGRSGFGPSRIMNPHAPE 1481
Query: 726 FVPKKAWSTNPVSEDSE 776
FVP++AW T + DS+
Sbjct: 1482 FVPRRAWQTKTPNADSQ 1498
Score = 60.8 bits (146), Expect = 8e-07
Identities = 32/50 (64%), Positives = 41/50 (82%)
Frame = +1
Query: 928 DAEKAELARQILLSFIVKSVQHSSDPVSQSPVTQTRSEFTENPSEAIAND 1077
D+EK+ELA QILLSFIVKSVQH+ DP S++ V + + E+T + SEAIAND
Sbjct: 1538 DSEKSELAXQILLSFIVKSVQHNLDPPSEAAVNE-KHEYTGSSSEAIAND 1586
Score = 57.8 bits (138), Expect = 7e-06
Identities = 27/30 (90%), Positives = 29/30 (96%)
Frame = +2
Query: 1217 VVTKRRRNRQHFTSGVNGLYNRQSISASVR 1306
VVTKRRRNRQHFT+GVNGLYN+QSI ASVR
Sbjct: 1629 VVTKRRRNRQHFTNGVNGLYNQQSICASVR 1658
>ref|XP_002517675.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
communis] gi|223543307|gb|EEF44839.1| eukaryotic
translation initiation factor 3 subunit, putative
[Ricinus communis]
Length = 1454
Score = 194 bits (492), Expect = 6e-47
Identities = 115/257 (44%), Positives = 147/257 (57%), Gaps = 2/257 (0%)
Frame = +3
Query: 15 EDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVAVAPPGTVLKPLLEKVE 194
ED+ KLQ+K+ V K ++ S + YKEVAVAPPGTVLKP LE VE
Sbjct: 1061 EDSVKLQQKACVPKPLSSPASVTTMASKSVS--------YKEVAVAPPGTVLKPSLEMVE 1112
Query: 195 DIKEVKTDTQIFHSPSEKLKENGITKITLEEAIPDDKASKEVDVXXXXXXXXXXXXXXXX 374
+ + + E + E G I++ + + D+ D
Sbjct: 1113 ESNVKTPEGETCSIQCEMVNEEGSKNISVADNLLDN-----ADTDGIGDSGTQSENSSSE 1167
Query: 375 VGKVEDSGNEDNSVETNGSKLSAAAEPFSPGGFPLTHPLTSVPVTSVYDVIASQGMLAEP 554
+ ++ S N++ S ETNGSKLSAAAEPF+PG + HP+ SV VTS+YDV ASQGML+EP
Sbjct: 1168 LDEISSSYNQEKSNETNGSKLSAAAEPFNPGALSMVHPVNSVAVTSIYDVRASQGMLSEP 1227
Query: 555 VGFPPLAARVPCGPRSPLYYRMSHSMRIKHGYMKYQIPPM--ERSGFGSSGIMNPHAPEF 728
V PPLAARVPCGPRSPLYYR + R+K G ++Y P RS MNPHAPEF
Sbjct: 1228 VA-PPLAARVPCGPRSPLYYRTTRPYRLKQGLLRYPTPMTMPPRS-------MNPHAPEF 1279
Query: 729 VPKKAWSTNPVSEDSEV 779
VP+KAW NP + DS+V
Sbjct: 1280 VPRKAWQRNPGTRDSQV 1296
>ref|XP_004136091.1| PREDICTED: clustered mitochondria protein homolog [Cucumis sativus]
Length = 1689
Score = 173 bits (439), Expect = 8e-41
Identities = 113/266 (42%), Positives = 151/266 (56%), Gaps = 7/266 (2%)
Frame = +3
Query: 3 SSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVAVAPPGTVLKPLL 182
SS+G+D+ KLQ K SK+ + + VS YKEVA+APPGTVL+ L+
Sbjct: 1294 SSAGDDSIKLQAKPTASKVISLSPASVSQMASRSIS-------YKEVALAPPGTVLRQLV 1346
Query: 183 --EKVEDIKEVKTDTQIFHSPSEKLKENGITKIT-----LEEAIPDDKASKEVDVXXXXX 341
E V +++E + Q ++ SE K + I+ EEA P + E +
Sbjct: 1347 DTENVIELEEKVAEPQSCNN-SETSKNDETNNISGEVVQKEEAEPIHNTAPESENQSQDS 1405
Query: 342 XXXXXXXXXXXVGKVEDSGNEDNSVETNGSKLSAAAEPFSPGGFPLTHPLTSVPVTSVYD 521
+ S + ETN SKLSAAAEPF+P +T L + VTS+YD
Sbjct: 1406 EEM-----------ISCSSPSEKPAETNASKLSAAAEPFNPST-SMTSGLNTAAVTSIYD 1453
Query: 522 VIASQGMLAEPVGFPPLAARVPCGPRSPLYYRMSHSMRIKHGYMKYQIPPMERSGFGSSG 701
V ASQG L EP+ PP +RVPCGPRSPLYYR ++S R+KH ++KYQ P M RSGFG+
Sbjct: 1454 VRASQGAL-EPL-LPPATSRVPCGPRSPLYYRNNNSFRMKHSFLKYQAPVMGRSGFGAPT 1511
Query: 702 IMNPHAPEFVPKKAWSTNPVSEDSEV 779
+MNPHAPEFVP++AW TN +S+V
Sbjct: 1512 MMNPHAPEFVPQRAWQTNHGDTNSKV 1537
>ref|XP_004158818.1| PREDICTED: clustered mitochondria protein homolog [Cucumis sativus]
Length = 1689
Score = 172 bits (437), Expect = 1e-40
Identities = 113/266 (42%), Positives = 151/266 (56%), Gaps = 7/266 (2%)
Frame = +3
Query: 3 SSSGEDTPKLQEKSLVSKISATQVSKVSPTXXXXXXXXXXXXXYKEVAVAPPGTVLKPLL 182
SS+G+D+ KLQ K SK+ + + VS YKEVA+APPGTVL+ L+
Sbjct: 1294 SSAGDDSIKLQAKPTASKVISLSPASVSQMASRSIS-------YKEVALAPPGTVLRQLV 1346
Query: 183 --EKVEDIKEVKTDTQIFHSPSEKLKENGITKIT-----LEEAIPDDKASKEVDVXXXXX 341
E V +++E + Q ++ SE K + I+ EEA P + E +
Sbjct: 1347 DTENVIELEEKVAEPQSCNN-SETSKNDETNNISGEVVQKEEAEPIHNTAPESENQSQDS 1405
Query: 342 XXXXXXXXXXXVGKVEDSGNEDNSVETNGSKLSAAAEPFSPGGFPLTHPLTSVPVTSVYD 521
+ S + ETN SKLSAAAEPF+P +T L + VTS+YD
Sbjct: 1406 EEM-----------ISCSSPSEKPAETNASKLSAAAEPFNPST-SMTCGLNTAAVTSIYD 1453
Query: 522 VIASQGMLAEPVGFPPLAARVPCGPRSPLYYRMSHSMRIKHGYMKYQIPPMERSGFGSSG 701
V ASQG L EP+ PP +RVPCGPRSPLYYR ++S R+KH ++KYQ P M RSGFG+
Sbjct: 1454 VRASQGAL-EPL-LPPATSRVPCGPRSPLYYRNNNSFRMKHSFLKYQAPVMGRSGFGAPT 1511
Query: 702 IMNPHAPEFVPKKAWSTNPVSEDSEV 779
+MNPHAPEFVP++AW TN +S+V
Sbjct: 1512 MMNPHAPEFVPQRAWQTNHGDTNSKV 1537