BLASTX nr result

ID: Bupleurum21_contig00004409 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004409
         (835 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318524.1| high mobility group family [Populus trichoca...    60   5e-07
gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]                 60   6e-07
ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789...    60   6e-07
ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788...    59   2e-06
ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis] g...    59   2e-06

>ref|XP_002318524.1| high mobility group family [Populus trichocarpa]
           gi|222859197|gb|EEE96744.1| high mobility group family
           [Populus trichocarpa]
          Length = 369

 Score = 60.5 bits (145), Expect = 5e-07
 Identities = 28/45 (62%), Positives = 34/45 (75%)
 Frame = -1

Query: 835 MKEKDGSSRQAISKYIENVYSNLSPDHGNLLTQQLRRMKNEGQLV 701
           +KE+DGSSR AI+KYIE  Y  LSP H +LLT  L+R+KN G LV
Sbjct: 62  LKEQDGSSRIAIAKYIERAYPGLSPSHSDLLTHHLKRLKNSGALV 106


>gb|AAA50196.1| DNA-binding protein [Nicotiana tabacum]
          Length = 546

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -1

Query: 835 MKEKDGSSRQAISKYIENVYSNLSPDHGNLLTQQLRRMKNEGQL 704
           +KE+DGSSR AI+KYI+ VY+NL P+H  LLT  L+R+KN G L
Sbjct: 58  LKERDGSSRIAIAKYIDRVYTNLPPNHSALLTHHLKRLKNSGYL 101


>ref|XP_003518169.1| PREDICTED: uncharacterized protein LOC100789987 [Glycine max]
          Length = 484

 Score = 60.1 bits (144), Expect = 6e-07
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -1

Query: 835 MKEKDGSSRQAISKYIENVYSNLSPDHGNLLTQQLRRMKNEGQL 704
           +KEKDGSS++AI+KYIE VY+ L P+H NLLTQ L  +K+ G L
Sbjct: 237 LKEKDGSSKRAIAKYIEQVYTQLPPNHSNLLTQHLTHLKSRGLL 280


>ref|XP_003533338.1| PREDICTED: uncharacterized protein LOC100788215 [Glycine max]
          Length = 477

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = -1

Query: 835 MKEKDGSSRQAISKYIENVYSNLSPDHGNLLTQQLRRMKNEGQL 704
           +KEKDGSS++AI+KYIE VY+ L P+H +LLTQ L  +K+ G L
Sbjct: 52  LKEKDGSSKRAIAKYIEQVYTQLPPNHSDLLTQHLNHLKSRGLL 95


>ref|XP_002534496.1| histone h1/h5, putative [Ricinus communis]
           gi|223525178|gb|EEF27887.1| histone h1/h5, putative
           [Ricinus communis]
          Length = 435

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 27/45 (60%), Positives = 34/45 (75%)
 Frame = -1

Query: 835 MKEKDGSSRQAISKYIENVYSNLSPDHGNLLTQQLRRMKNEGQLV 701
           +KE+DGSS++AI+KYIE VY  L P H  LLT  L+R+KN G LV
Sbjct: 83  LKERDGSSKRAIAKYIERVYPGLPPTHSALLTHHLKRLKNTGLLV 127


Top