BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004404
         (1524 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chlorop...   601   e-169
ref|XP_002519282.1| tex protein-relatedtranscription accessory p...   588   e-166
sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, ch...   587   e-165
gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]        586   e-165
ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chlorop...   583   e-164

>ref|XP_002280604.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Vitis vinifera]
            gi|296083203|emb|CBI22839.3| unnamed protein product
            [Vitis vinifera]
          Length = 410

 Score =  601 bits (1549), Expect = e-169
 Identities = 307/366 (83%), Positives = 330/366 (90%)
 Frame = -2

Query: 1205 VPTAETRERARLKEMFEDAYERCRTNPMEGVAFKIDDFYTAIQEYDFNSEIGTKVTGTVF 1026
            +  A+T+ER +LKEMFEDAYERCRT P EGV+F  DDFY+A+ +YDFNSEIGTKV GTVF
Sbjct: 44   ISNAQTKERLKLKEMFEDAYERCRTAPTEGVSFSADDFYSALDKYDFNSEIGTKVKGTVF 103

Query: 1025 NTDANGALVDITAKSSAYLPVREASIHEIKHVKEAGIVPGLREEFVIIGENSNDDSLILS 846
             TD NGALVDITAKSSAYLPV EA IH+IKHV+EAGIVPG+REEFVIIGEN  DDSLILS
Sbjct: 104  CTDTNGALVDITAKSSAYLPVYEACIHKIKHVEEAGIVPGVREEFVIIGENEADDSLILS 163

Query: 845  LRSIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSPAEEL 666
            LRSIQYDLAWERCRQLQAED                  VEGLRGFVPFSQIS+K+ AEEL
Sbjct: 164  LRSIQYDLAWERCRQLQAEDVVVKGKVVGANKGGVVALVEGLRGFVPFSQISSKTTAEEL 223

Query: 665  IEKEIPLKFVEVDEEQSRLVLSNRRAMADSQAQLGIGSVVIGSVQSLKPYGAFIDIGGIN 486
            ++KE+P+KFVEVDEEQSRLVLSNR+AMADSQAQLGIGSVV G+VQSLKPYGAFIDIGGIN
Sbjct: 224  LDKELPVKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGIN 283

Query: 485  GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 306
            GLLHVSQISHDRVSDIATVLQPGD LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL
Sbjct: 284  GLLHVSQISHDRVSDIATVLQPGDILKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 343

Query: 305  VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSSDLPADGLDLSD 126
            VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGP+S+DLPA+GLDLSD
Sbjct: 344  VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPVSADLPAEGLDLSD 403

Query: 125  IPPAED 108
            +PPAED
Sbjct: 404  VPPAED 409


>ref|XP_002519282.1| tex protein-relatedtranscription accessory protein, putative [Ricinus
            communis] gi|223541597|gb|EEF43146.1| tex
            protein-relatedtranscription accessory protein, putative
            [Ricinus communis]
          Length = 412

 Score =  588 bits (1517), Expect = e-166
 Identities = 301/367 (82%), Positives = 333/367 (90%), Gaps = 1/367 (0%)
 Frame = -2

Query: 1205 VPTAETRERARLKEMFEDAYERCRTNPMEGVAFKIDDFYTAIQEYDFNSEIGTKVTGTVF 1026
            +  A+T+ER +LK++FEDAYERCRT PMEGVAF  +DF++A+++YDFNSEIGT V GTVF
Sbjct: 46   ISNAQTKEREKLKQLFEDAYERCRTAPMEGVAFTAEDFHSALEKYDFNSEIGTTVKGTVF 105

Query: 1025 NTDANGALVDITAKSSAYLPVREASIHEIKHVKEAGIVPGLREEFVIIGENSNDDSLILS 846
             TDANGA+VDITAKSSAYLPV+EA IH+IKHV+EAGIVPGL +EFVIIGEN  DDSLILS
Sbjct: 106  MTDANGAVVDITAKSSAYLPVQEACIHKIKHVEEAGIVPGLTQEFVIIGENEADDSLILS 165

Query: 845  LRSIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXVEG-LRGFVPFSQISTKSPAEE 669
            LR+IQYDL+WERCRQLQAED                  VEG LRGFVPFSQIS+KS AEE
Sbjct: 166  LRAIQYDLSWERCRQLQAEDVIVKGKVVGANKGGVVAIVEGGLRGFVPFSQISSKSTAEE 225

Query: 668  LIEKEIPLKFVEVDEEQSRLVLSNRRAMADSQAQLGIGSVVIGSVQSLKPYGAFIDIGGI 489
            L+EKE+PLKFV+VDEEQSRLVLSNR+AMADSQAQLGIGSVVIG+VQSLKPYGAFIDIGGI
Sbjct: 226  LLEKELPLKFVDVDEEQSRLVLSNRKAMADSQAQLGIGSVVIGTVQSLKPYGAFIDIGGI 285

Query: 488  NGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPK 309
            NGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPK
Sbjct: 286  NGLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPK 345

Query: 308  LVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSSDLPADGLDLS 129
            LVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGL+L+SDGILGP++SD+PA+GLDLS
Sbjct: 346  LVFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSDGILGPVTSDMPAEGLDLS 405

Query: 128  DIPPAED 108
            D+P AED
Sbjct: 406  DVPSAED 412


>sp|P29344.1|RR1_SPIOL RecName: Full=30S ribosomal protein S1, chloroplastic; AltName:
            Full=CS1; Flags: Precursor gi|18060|emb|CAA46927.1|
            ribosomal protein S1 [Spinacia oleracea]
            gi|170143|gb|AAA34045.1| chloroplast ribosomal protein S1
            [Spinacia oleracea]
          Length = 411

 Score =  587 bits (1513), Expect = e-165
 Identities = 301/364 (82%), Positives = 328/364 (90%)
 Frame = -2

Query: 1205 VPTAETRERARLKEMFEDAYERCRTNPMEGVAFKIDDFYTAIQEYDFNSEIGTKVTGTVF 1026
            V  A+TRER +LK++FEDAYERCR  PMEGV+F IDDF+TA+ +YDFNSE+G++V GTVF
Sbjct: 45   VSNAQTRERQKLKQLFEDAYERCRNAPMEGVSFTIDDFHTALDKYDFNSEMGSRVKGTVF 104

Query: 1025 NTDANGALVDITAKSSAYLPVREASIHEIKHVKEAGIVPGLREEFVIIGENSNDDSLILS 846
             TDANGALVDITAKSSAYLP+ EA I+ IK+V+EAGI+PG+REEFVIIGEN  DDSLILS
Sbjct: 105  CTDANGALVDITAKSSAYLPLAEACIYRIKNVEEAGIIPGVREEFVIIGENEADDSLILS 164

Query: 845  LRSIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSPAEEL 666
            LR IQY+LAWERCRQLQAED                  VEGLRGFVPFSQIS+KS AEEL
Sbjct: 165  LRQIQYELAWERCRQLQAEDVVVKGKIVGANKGGVVALVEGLRGFVPFSQISSKSSAEEL 224

Query: 665  IEKEIPLKFVEVDEEQSRLVLSNRRAMADSQAQLGIGSVVIGSVQSLKPYGAFIDIGGIN 486
            +EKEIPLKFVEVDEEQSRLV+SNR+AMADSQAQLGIGSVV G+VQSLKPYGAFIDIGGIN
Sbjct: 225  LEKEIPLKFVEVDEEQSRLVMSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGIN 284

Query: 485  GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 306
            GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL
Sbjct: 285  GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 344

Query: 305  VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSSDLPADGLDLSD 126
            VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTL+SDGILGPL+SDLPA+GLDLS 
Sbjct: 345  VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDLSV 404

Query: 125  IPPA 114
            +PPA
Sbjct: 405  VPPA 408


>gb|ADW83720.1| ribosomal protein S4 [Musa acuminata AAA Group]
          Length = 415

 Score =  586 bits (1510), Expect = e-165
 Identities = 299/364 (82%), Positives = 329/364 (90%)
 Frame = -2

Query: 1199 TAETRERARLKEMFEDAYERCRTNPMEGVAFKIDDFYTAIQEYDFNSEIGTKVTGTVFNT 1020
            T+  +ER +LKE+FE+AY+RCRT PMEGVAF ++DF++A+++YDF+SEIGTKV GTVF T
Sbjct: 52   TSAQKERQKLKEVFEEAYDRCRTAPMEGVAFTVEDFHSALEKYDFDSEIGTKVKGTVFMT 111

Query: 1019 DANGALVDITAKSSAYLPVREASIHEIKHVKEAGIVPGLREEFVIIGENSNDDSLILSLR 840
            D NGALVDITAKSSAYLPV+EA IH+IKHV EAGI PGL EEFVIIGE + DDSLILSLR
Sbjct: 112  DMNGALVDITAKSSAYLPVQEACIHKIKHVSEAGIYPGLVEEFVIIGEMNADDSLILSLR 171

Query: 839  SIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSPAEELIE 660
            SIQYDLAWERCRQLQAED                  VEGLRGFVPFSQIS KS AEELI+
Sbjct: 172  SIQYDLAWERCRQLQAEDVIVKGKVVGGNKGGVVAIVEGLRGFVPFSQISAKSTAEELID 231

Query: 659  KEIPLKFVEVDEEQSRLVLSNRRAMADSQAQLGIGSVVIGSVQSLKPYGAFIDIGGINGL 480
            KE+PLKFVEVDEEQSRLVLSNR+AMADSQAQLGIGSVV+G+VQSLKPYGAF+DIGGINGL
Sbjct: 232  KELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVLGTVQSLKPYGAFVDIGGINGL 291

Query: 479  LHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVF 300
            LHVSQISHDRVSDI+TVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVF
Sbjct: 292  LHVSQISHDRVSDISTVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKLVF 351

Query: 299  EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSSDLPADGLDLSDIP 120
            EKA+EMAQ FRQRIAQAEAMARADMLRFQPESGLTLNS+GILGPL+SDLPA+GLDLS+IP
Sbjct: 352  EKADEMAQIFRQRIAQAEAMARADMLRFQPESGLTLNSEGILGPLTSDLPAEGLDLSEIP 411

Query: 119  PAED 108
            PA+D
Sbjct: 412  PADD 415


>ref|XP_004147619.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Cucumis
            sativus] gi|449517357|ref|XP_004165712.1| PREDICTED: 30S
            ribosomal protein S1, chloroplastic-like [Cucumis
            sativus]
          Length = 413

 Score =  583 bits (1504), Expect = e-164
 Identities = 292/366 (79%), Positives = 329/366 (89%)
 Frame = -2

Query: 1205 VPTAETRERARLKEMFEDAYERCRTNPMEGVAFKIDDFYTAIQEYDFNSEIGTKVTGTVF 1026
            +P+ +TRER +LKE+FE+AYERCR  P+EG++F ++DF+ A+++YDF+SE+GTKV GTVF
Sbjct: 48   IPSPQTRERFKLKEVFEEAYERCRNAPVEGISFTLEDFHAALEKYDFDSELGTKVKGTVF 107

Query: 1025 NTDANGALVDITAKSSAYLPVREASIHEIKHVKEAGIVPGLREEFVIIGENSNDDSLILS 846
             TD NGALVDITAKSSAYLP++EA IH IKHV+EAG+ PGLREEFVIIGEN +DDSLILS
Sbjct: 108  CTDNNGALVDITAKSSAYLPLQEACIHRIKHVEEAGVFPGLREEFVIIGENESDDSLILS 167

Query: 845  LRSIQYDLAWERCRQLQAEDXXXXXXXXXXXXXXXXXXVEGLRGFVPFSQISTKSPAEEL 666
            LRSIQYDLAWERCRQLQAED                  VEGLRGFVPFSQISTKS AEEL
Sbjct: 168  LRSIQYDLAWERCRQLQAEDVVVKGKVVDANKGGVVAVVEGLRGFVPFSQISTKSNAEEL 227

Query: 665  IEKEIPLKFVEVDEEQSRLVLSNRRAMADSQAQLGIGSVVIGSVQSLKPYGAFIDIGGIN 486
            + KE+PLKFVEVDEEQSRLVLSNR+AMADSQAQLGIGSVV G+VQSLKPYGAFIDIGGIN
Sbjct: 228  LSKELPLKFVEVDEEQSRLVLSNRKAMADSQAQLGIGSVVTGTVQSLKPYGAFIDIGGIN 287

Query: 485  GLLHVSQISHDRVSDIATVLQPGDTLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 306
            GLLHVSQISHDR+SDIATVLQPGD+LKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL
Sbjct: 288  GLLHVSQISHDRISDIATVLQPGDSLKVMILSHDRERGRVSLSTKKLEPTPGDMIRNPKL 347

Query: 305  VFEKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSSDLPADGLDLSD 126
            VFEKAEEMAQTFRQRIAQAEA+ARADMLRFQPESGLTL +DGILGP++ +LP +GLDL+D
Sbjct: 348  VFEKAEEMAQTFRQRIAQAEALARADMLRFQPESGLTLTTDGILGPITPELPVEGLDLND 407

Query: 125  IPPAED 108
            +PPAE+
Sbjct: 408  VPPAEE 413