BLASTX nr result
ID: Bupleurum21_contig00004376
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00004376 (532 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002299680.1| predicted protein [Populus trichocarpa] gi|2... 65 6e-09 ref|XP_002304079.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 ref|XP_002513710.1| conserved hypothetical protein [Ricinus comm... 58 1e-06 >ref|XP_002299680.1| predicted protein [Populus trichocarpa] gi|222846938|gb|EEE84485.1| predicted protein [Populus trichocarpa] Length = 642 Score = 65.1 bits (157), Expect = 6e-09 Identities = 46/118 (38%), Positives = 55/118 (46%) Frame = +1 Query: 1 GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180 GLV S SS + + IDS E+ KRQ LIP QVLVPLSMK Sbjct: 530 GLVSASSVAGSSIDTNHSYSGVSAVSDSIDSLEKPAKRQHLIPAQVLVPLSMK-VSSSCT 588 Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAIDG 354 EN EG+N G +GG K C +++VPEGRVH N+IDG Sbjct: 589 GFMNTENLEEGTN--GYGASNGGIKGC---DYLVPEGRVHGGALMSLFGGNLKNSIDG 641 >ref|XP_002304079.1| predicted protein [Populus trichocarpa] gi|222841511|gb|EEE79058.1| predicted protein [Populus trichocarpa] Length = 642 Score = 63.9 bits (154), Expect = 1e-08 Identities = 46/117 (39%), Positives = 55/117 (47%) Frame = +1 Query: 1 GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180 GLV ST SS +N + DS E+ KR LIPPQVLVP SMK Sbjct: 530 GLVSAASTAGSSIDNNHSYSGVSAVSDCSDSLEKPAKRLHLIPPQVLVPHSMK-ATSSFT 588 Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAID 351 +N EG+N G T GG KN F+++VPEGRVH NAI+ Sbjct: 589 SFMNADNLEEGTNGYGAT--SGGKKN---FDYLVPEGRVHGGGLMSLFGGNLRNAIN 640 >ref|XP_002513710.1| conserved hypothetical protein [Ricinus communis] gi|223547161|gb|EEF48657.1| conserved hypothetical protein [Ricinus communis] Length = 646 Score = 57.8 bits (138), Expect = 1e-06 Identities = 41/118 (34%), Positives = 49/118 (41%) Frame = +1 Query: 1 GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180 GLV S SS +N Y DS + KRQ LIP QVLVP SMK Sbjct: 531 GLVSAASNAGSSIDNNYSSSGISAVSDCTDSLGKPTKRQHLIPAQVLVPPSMK-SSSSYS 589 Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAIDG 354 E + EG N + G + F+++ PEGRVH NAIDG Sbjct: 590 SFLNAEKQEEGRNE--YSAGAGSTSRVTSFDYMAPEGRVHGGGLMSLFGGNLKNAIDG 645