BLASTX nr result

ID: Bupleurum21_contig00004376 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004376
         (532 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299680.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09
ref|XP_002304079.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002513710.1| conserved hypothetical protein [Ricinus comm...    58   1e-06

>ref|XP_002299680.1| predicted protein [Populus trichocarpa] gi|222846938|gb|EEE84485.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 46/118 (38%), Positives = 55/118 (46%)
 Frame = +1

Query: 1   GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180
           GLV   S   SS +  +           IDS E+  KRQ LIP QVLVPLSMK       
Sbjct: 530 GLVSASSVAGSSIDTNHSYSGVSAVSDSIDSLEKPAKRQHLIPAQVLVPLSMK-VSSSCT 588

Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAIDG 354
                EN  EG+N  G    +GG K C   +++VPEGRVH             N+IDG
Sbjct: 589 GFMNTENLEEGTN--GYGASNGGIKGC---DYLVPEGRVHGGALMSLFGGNLKNSIDG 641


>ref|XP_002304079.1| predicted protein [Populus trichocarpa] gi|222841511|gb|EEE79058.1|
           predicted protein [Populus trichocarpa]
          Length = 642

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 46/117 (39%), Positives = 55/117 (47%)
 Frame = +1

Query: 1   GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180
           GLV   ST  SS +N +            DS E+  KR  LIPPQVLVP SMK       
Sbjct: 530 GLVSAASTAGSSIDNNHSYSGVSAVSDCSDSLEKPAKRLHLIPPQVLVPHSMK-ATSSFT 588

Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAID 351
                +N  EG+N  G T   GG KN   F+++VPEGRVH             NAI+
Sbjct: 589 SFMNADNLEEGTNGYGAT--SGGKKN---FDYLVPEGRVHGGGLMSLFGGNLRNAIN 640


>ref|XP_002513710.1| conserved hypothetical protein [Ricinus communis]
           gi|223547161|gb|EEF48657.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 646

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 41/118 (34%), Positives = 49/118 (41%)
 Frame = +1

Query: 1   GLVHTISTGDSSYNNTYXXXXXXXXXXXIDSRERHPKRQKLIPPQVLVPLSMKXXXXXXX 180
           GLV   S   SS +N Y            DS  +  KRQ LIP QVLVP SMK       
Sbjct: 531 GLVSAASNAGSSIDNNYSSSGISAVSDCTDSLGKPTKRQHLIPAQVLVPPSMK-SSSSYS 589

Query: 181 XXXXXENKGEGSNHRGITGHDGGSKNCKKFEFVVPEGRVHXXXXXXXXXXXXNNAIDG 354
                E + EG N    +   G +     F+++ PEGRVH             NAIDG
Sbjct: 590 SFLNAEKQEEGRNE--YSAGAGSTSRVTSFDYMAPEGRVHGGGLMSLFGGNLKNAIDG 645


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