BLASTX nr result

ID: Bupleurum21_contig00004372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004372
         (1454 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEJ84000.1| CONSTANS protein [Nicotiana tabacum]                   270   5e-70
ref|NP_001233839.1| CONSTANS 1 [Solanum lycopersicum] gi|4554488...   270   7e-70
ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE...   268   2e-69
gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]                   267   6e-69
emb|CAN74840.1| hypothetical protein VITISV_035527 [Vitis vinifera]   267   6e-69

>gb|AEJ84000.1| CONSTANS protein [Nicotiana tabacum]
          Length = 403

 Score =  270 bits (691), Expect = 5e-70
 Identities = 151/297 (50%), Positives = 180/297 (60%), Gaps = 22/297 (7%)
 Frame = +1

Query: 79  MFKEEQNGSSWARICDTCRSAPCTVYCRADLAYLCTTCDARIHAAANGIASQHERVWICE 258
           M K+E + ++WA++CDTCRS  CTVYCRAD AYLC  CDARIHAA N +AS+HERVW+CE
Sbjct: 1   MLKKENSSNNWAKVCDTCRSTACTVYCRADSAYLCAGCDARIHAA-NLVASRHERVWVCE 59

Query: 259 ACERAPAAFICKADAASLCTNCDADIHSANPLASRHHRVPIAPIPGCVYGPQPAKGSILG 438
           ACERAPAAF+CKADAASLC +CDADIHSANPLA RHHRVPI PIPG +YGP PA  ++ G
Sbjct: 60  ACERAPAAFLCKADAASLCASCDADIHSANPLARRHHRVPIMPIPGTLYGP-PAVDTLSG 118

Query: 439 -----------ELDHDGFLTRETXXXXXXXXXXXXXXXXXWLLIN-PAKDNPNLITN--- 573
                        + DGFL+                    WLL+N P K+N   I N   
Sbjct: 119 GTLMIGGPEGDATEDDGFLSLTQDADDTTIDEEDKDEAASWLLLNLPVKNNNKNINNNNN 178

Query: 574 -----GLLFGGEAVDEYLDFVDFNSCQDNQFSAHQQYDVPQKSYGEQYKDQMKYCVPQKS 738
                G+LFGGE VDEYLD  ++    D+QF  + QY V Q+        Q  Y VPQK+
Sbjct: 179 NQNNYGMLFGGEVVDEYLDLAEYGG--DSQF--NDQYSVNQQ--------QQNYSVPQKN 226

Query: 739 YAGDSVVPVQNGQVK--IHXXXXXXXXXXXXXXXXXXMDMEYDTSNTGYCYPPSLTH 903
           Y GDSVVPVQ+ Q K  I                   + MEYD SNTGY YP S++H
Sbjct: 227 YGGDSVVPVQDRQGKSMILYQQQQQQQQQYNHHLSFQLGMEYDNSNTGYGYPASMSH 283



 Score =  109 bits (272), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 59/76 (77%)
 Frame = +3

Query: 1047 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDSEVEVDQMF 1226
            QLTPMDREARVLRY            IRYASRKAYAETRPRIKGRFAKRTD E EVDQMF
Sbjct: 328  QLTPMDREARVLRYREEKRNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMF 387

Query: 1227 SANMMAETGYGIVPSF 1274
            S  ++A++ YGIVPSF
Sbjct: 388  STQLIADSSYGIVPSF 403


>ref|NP_001233839.1| CONSTANS 1 [Solanum lycopersicum] gi|45544881|gb|AAS67376.1|
           CONSTANS 1 [Solanum lycopersicum]
           gi|45544883|gb|AAS67377.1| CONSTANS 1 [Solanum
           lycopersicum]
          Length = 391

 Score =  270 bits (690), Expect = 7e-70
 Identities = 148/284 (52%), Positives = 175/284 (61%), Gaps = 12/284 (4%)
 Frame = +1

Query: 88  EEQNGSSWARICDTCRSAPCTVYCRADLAYLCTTCDARIHAAANGIASQHERVWICEACE 267
           +++N ++WAR+CD+C SA CTVYCRAD AYLC  CDARIH A+  +AS+HERVW+CEACE
Sbjct: 3   KKENSNNWARVCDSCHSATCTVYCRADSAYLCAGCDARIHTASL-MASRHERVWVCEACE 61

Query: 268 RAPAAFICKADAASLCTNCDADIHSANPLASRHHRVPIAPIPGCVYGPQPAKGSILG--- 438
           RAPAAF+CKADAASLC +CDADIHSANPLA RHHRVPI PIPG +YGP PA  +I G   
Sbjct: 62  RAPAAFLCKADAASLCASCDADIHSANPLARRHHRVPIMPIPGTIYGP-PAVHTITGGSM 120

Query: 439 --------ELDHDGFLTRETXXXXXXXXXXXXXXXXXWLLINPAKDNPNLITN-GLLFGG 591
                     + DGFL+                    WLL+NP   N N   N G+LFGG
Sbjct: 121 MIGGTTGEGTEDDGFLSLNQDADDTTIDEEDEDEAASWLLLNPPVKNNNKNNNYGMLFGG 180

Query: 592 EAVDEYLDFVDFNSCQDNQFSAHQQYDVPQKSYGEQYKDQMKYCVPQKSYAGDSVVPVQN 771
           E VD+YLD  ++    D+QF  + QY V Q+        Q  Y VPQKSY  DSVVPVQN
Sbjct: 181 EVVDDYLDLAEYGG--DSQF--NDQYSVNQQ--------QQHYSVPQKSYVEDSVVPVQN 228

Query: 772 GQVKIHXXXXXXXXXXXXXXXXXXMDMEYDTSNTGYCYPPSLTH 903
           GQ K                    + MEYD SNTGY YP SL+H
Sbjct: 229 GQRK-SLILYQTPQQQQSHHLNFQLGMEYDNSNTGYGYPASLSH 271



 Score =  109 bits (272), Expect = 2e-21
 Identities = 55/76 (72%), Positives = 58/76 (76%)
 Frame = +3

Query: 1047 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDSEVEVDQMF 1226
            QLTPMDREARVLRY            IRYASRKAYAETRPRIKGRFAKRTD E EVDQMF
Sbjct: 316  QLTPMDREARVLRYREKKKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEVDQMF 375

Query: 1227 SANMMAETGYGIVPSF 1274
            S  +M ++ YGIVPSF
Sbjct: 376  STQLMTDSNYGIVPSF 391


>ref|XP_002282509.1| PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Vitis
           vinifera]
          Length = 391

 Score =  268 bits (686), Expect = 2e-69
 Identities = 148/277 (53%), Positives = 175/277 (63%), Gaps = 9/277 (3%)
 Frame = +1

Query: 100 GSSWARICDTCRSAPCTVYCRADLAYLCTTCDARIHAAANGIASQHERVWICEACERAPA 279
           G  WAR+CDTCRSA CT+YCRAD AYLC  CDARIHAA N +ASQHERVW+CE+CERAPA
Sbjct: 16  GGGWARVCDTCRSAACTIYCRADSAYLCAGCDARIHAA-NRVASQHERVWVCESCERAPA 74

Query: 280 AFICKADAASLCTNCDADIHSANPLASRHHRVPIAPIPGCVYGPQPAK---GSIL---GE 441
           AF+CKADAASLC  CDADIHSANPLA RHHRVP+ PI GC+YGP PA    G+++    E
Sbjct: 75  AFVCKADAASLCATCDADIHSANPLARRHHRVPVLPIAGCLYGP-PATDPGGTVVRSAAE 133

Query: 442 LDHDGFLTRETXXXXXXXXXXXXXXXXXWLLINPAKDN---PNLITNGLLFGGEAVDEYL 612
            D +GFL +E                  WLL+NP K+N    N   NGLLFGGE VDEYL
Sbjct: 134 AD-NGFLGQEA---EETIDEEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGE-VDEYL 188

Query: 613 DFVDFNSCQDNQFSAHQQYDVPQKSYGEQYKDQMKYCVPQKSYAGDSVVPVQNGQVKIHX 792
           D V++NSC +NQFS   QY+        Q +    Y VP K+Y GD VVPVQ G+ K   
Sbjct: 189 DLVEYNSCPENQFS--DQYN--------QQQPPPHYSVPHKNYGGDRVVPVQCGEAK--- 235

Query: 793 XXXXXXXXXXXXXXXXXMDMEYDTSNTGYCYPPSLTH 903
                            + MEY++S   Y Y PS++H
Sbjct: 236 ----GQLHQQHQQQGFHLGMEYESSKAAYSYNPSISH 268



 Score =  115 bits (289), Expect = 2e-23
 Identities = 59/76 (77%), Positives = 61/76 (80%)
 Frame = +3

Query: 1047 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDSEVEVDQMF 1226
            QLTPMDREARVLRY            IRYASRKAYAETRPRIKGRFAKRTD EVEVDQMF
Sbjct: 316  QLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQMF 375

Query: 1227 SANMMAETGYGIVPSF 1274
            S  +MAE+GYGIVPSF
Sbjct: 376  STTLMAESGYGIVPSF 391


>gb|ACC95129.1| COL1 [Beta vulgaris subsp. vulgaris]
          Length = 367

 Score =  267 bits (682), Expect = 6e-69
 Identities = 136/240 (56%), Positives = 159/240 (66%), Gaps = 3/240 (1%)
 Frame = +1

Query: 79  MFKEEQNGS---SWARICDTCRSAPCTVYCRADLAYLCTTCDARIHAAANGIASQHERVW 249
           M KEE +GS   SWAR+CDTCR+APCTVYCRAD A+LCT+CDARIHAA N +AS+HERVW
Sbjct: 1   MMKEEVSGSDTNSWARVCDTCRAAPCTVYCRADSAFLCTSCDARIHAA-NQVASRHERVW 59

Query: 250 ICEACERAPAAFICKADAASLCTNCDADIHSANPLASRHHRVPIAPIPGCVYGPQPAKGS 429
           +CEACERAPAAF+CKADAASLC  CDA+IHSANPLA RH RVPI P+ GCVYGPQ     
Sbjct: 60  VCEACERAPAAFLCKADAASLCATCDAEIHSANPLARRHQRVPIMPVAGCVYGPQG---- 115

Query: 430 ILGELDHDGFLTRETXXXXXXXXXXXXXXXXXWLLINPAKDNPNLITNGLLFGGEAVDEY 609
             G +  D FLT                    WLL+NP K++ N  TNG L GG  VDEY
Sbjct: 116 --GRMSEDRFLTLPEGDDHTTDHEGDEDEAASWLLLNPVKNSNNQNTNGFLTGGGEVDEY 173

Query: 610 LDFVDFNSCQDNQFSAHQQYDVPQKSYGEQYKDQMKYCVPQKSYAGDSVVPVQNGQVKIH 789
           LD +++NS  DNQ               EQY  Q ++ VP+K+  GDSVVPVQ  + K H
Sbjct: 174 LDLLEYNSGADNQLC-------------EQYNQQQEFKVPEKNCGGDSVVPVQCREAKDH 220



 Score =  105 bits (263), Expect = 2e-20
 Identities = 51/76 (67%), Positives = 61/76 (80%)
 Frame = +3

Query: 1047 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDSEVEVDQMF 1226
            QL+P+DREARV+RY            IRYASRKAYAETRPRIKGRFAKRTD E E+DQMF
Sbjct: 292  QLSPLDREARVMRYREKKKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEAEMDQMF 351

Query: 1227 SANMMAETGYGIVPSF 1274
            + ++MA++GYGIVPS+
Sbjct: 352  TNSLMADSGYGIVPSY 367


>emb|CAN74840.1| hypothetical protein VITISV_035527 [Vitis vinifera]
          Length = 449

 Score =  267 bits (682), Expect = 6e-69
 Identities = 148/277 (53%), Positives = 174/277 (62%), Gaps = 9/277 (3%)
 Frame = +1

Query: 100 GSSWARICDTCRSAPCTVYCRADLAYLCTTCDARIHAAANGIASQHERVWICEACERAPA 279
           G  WAR+CDTCRSA CT+YCRAD AYLC  CDARIHAA N +ASQHERVW+CE+CERAPA
Sbjct: 16  GGGWARVCDTCRSAACTIYCRADSAYLCAGCDARIHAA-NRVASQHERVWVCESCERAPA 74

Query: 280 AFICKADAASLCTNCDADIHSANPLASRHHRVPIAPIPGCVYGPQPAK---GSIL---GE 441
           AF+CKADAASLC  CDADIHSANPLA RHHRVP  PI GC+YGP PA    G+++    E
Sbjct: 75  AFVCKADAASLCATCDADIHSANPLARRHHRVPXLPIAGCLYGP-PATDPGGTVVRSAAE 133

Query: 442 LDHDGFLTRETXXXXXXXXXXXXXXXXXWLLINPAKDN---PNLITNGLLFGGEAVDEYL 612
            D +GFL +E                  WLL+NP K+N    N   NGLLFGGE VDEYL
Sbjct: 134 AD-NGFLGQEA---EETIDEEDEDEAASWLLLNPVKNNNGSSNNQNNGLLFGGE-VDEYL 188

Query: 613 DFVDFNSCQDNQFSAHQQYDVPQKSYGEQYKDQMKYCVPQKSYAGDSVVPVQNGQVKIHX 792
           D V++NSC +NQFS   QY+        Q +    Y VP K+Y GD VVPVQ G+ K   
Sbjct: 189 DLVEYNSCPENQFS--DQYN--------QQQPPPHYSVPHKNYGGDXVVPVQCGEAK--- 235

Query: 793 XXXXXXXXXXXXXXXXXMDMEYDTSNTGYCYPPSLTH 903
                            + MEY++S   Y Y PS++H
Sbjct: 236 ----GQLHQQHQQQGFHLGMEYESSKAAYSYNPSISH 268



 Score =  115 bits (289), Expect = 2e-23
 Identities = 59/76 (77%), Positives = 61/76 (80%)
 Frame = +3

Query: 1047 QLTPMDREARVLRYXXXXXXXXXXXXIRYASRKAYAETRPRIKGRFAKRTDSEVEVDQMF 1226
            QLTPMDREARVLRY            IRYASRKAYAETRPRIKGRFAKRTD EVEVDQMF
Sbjct: 374  QLTPMDREARVLRYREKKKTRKFEKTIRYASRKAYAETRPRIKGRFAKRTDVEVEVDQMF 433

Query: 1227 SANMMAETGYGIVPSF 1274
            S  +MAE+GYGIVPSF
Sbjct: 434  STTLMAESGYGIVPSF 449


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