BLASTX nr result

ID: Bupleurum21_contig00004369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004369
         (727 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia es...   181   2e-45
ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus comm...   180   3e-45
gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]        178   3e-45
ref|XP_004136973.1| PREDICTED: 40S ribosomal protein S16-like [C...   179   8e-45
ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus comm...   179   2e-44

>gb|AAF34799.1|AF227979_1 40S ribosomal protein S16 [Euphorbia esula]
          Length = 144

 Score =  181 bits (459), Expect(2) = 2e-45
 Identities = 89/91 (97%), Positives = 91/91 (100%)
 Frame = +3

Query: 270 LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEESKKEIKDILVRY 449
           LLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDE+SKKEIKDILVRY
Sbjct: 54  LLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRY 113

Query: 450 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 542
           DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 114 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 144



 Score = 28.1 bits (61), Expect(2) = 2e-45
 Identities = 11/11 (100%), Positives = 11/11 (100%)
 Frame = +2

Query: 122 PTESVQCFGRK 154
           PTESVQCFGRK
Sbjct: 4   PTESVQCFGRK 14


>ref|XP_002518738.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223542119|gb|EEF43663.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 151

 Score =  180 bits (456), Expect(2) = 3e-45
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = +3

Query: 270 LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEESKKEIKDILVRY 449
           LLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQK+VDE+SKKEIKDILVRY
Sbjct: 61  LLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKYVDEQSKKEIKDILVRY 120

Query: 450 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 542
           DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 121 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 151



 Score = 28.5 bits (62), Expect(2) = 3e-45
 Identities = 14/21 (66%), Positives = 15/21 (71%), Gaps = 3/21 (14%)
 Frame = +2

Query: 101 MATP---PPAPTESVQCFGRK 154
           MA P    P+ TESVQCFGRK
Sbjct: 1   MAAPVATTPSQTESVQCFGRK 21


>gb|ADR71283.1| 40S ribosomal protein S16A [Hevea brasiliensis]
          Length = 147

 Score =  178 bits (452), Expect(2) = 3e-45
 Identities = 87/91 (95%), Positives = 91/91 (100%)
 Frame = +3

Query: 270 LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEESKKEIKDILVRY 449
           LLLGRHRF+GVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDE+SKKEIKDILVRY
Sbjct: 57  LLLGRHRFAGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRY 116

Query: 450 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 542
           DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 117 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 147



 Score = 29.6 bits (65), Expect(2) = 3e-45
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 113 PPAPTESVQCFGRK 154
           P AP ESVQCFGRK
Sbjct: 4   PAAPIESVQCFGRK 17


>ref|XP_004136973.1| PREDICTED: 40S ribosomal protein S16-like [Cucumis sativus]
           gi|449445892|ref|XP_004140706.1| PREDICTED: 40S
           ribosomal protein S16-like [Cucumis sativus]
           gi|449464500|ref|XP_004149967.1| PREDICTED: 40S
           ribosomal protein S16-like [Cucumis sativus]
           gi|449495622|ref|XP_004159897.1| PREDICTED: 40S
           ribosomal protein S16-like [Cucumis sativus]
           gi|449497669|ref|XP_004160469.1| PREDICTED: 40S
           ribosomal protein S16-like [Cucumis sativus]
           gi|449501676|ref|XP_004161434.1| PREDICTED: 40S
           ribosomal protein S16-like [Cucumis sativus]
          Length = 144

 Score =  179 bits (455), Expect(2) = 8e-45
 Identities = 88/91 (96%), Positives = 91/91 (100%)
 Frame = +3

Query: 270 LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEESKKEIKDILVRY 449
           LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVA+YQK+VDE+SKKEIKDILVRY
Sbjct: 54  LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAFYQKYVDEQSKKEIKDILVRY 113

Query: 450 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 542
           DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 114 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 144



 Score = 27.3 bits (59), Expect(2) = 8e-45
 Identities = 11/12 (91%), Positives = 11/12 (91%)
 Frame = +2

Query: 119 APTESVQCFGRK 154
           AP ESVQCFGRK
Sbjct: 3   APIESVQCFGRK 14


>ref|XP_002527855.1| ribosomal protein S9, putative [Ricinus communis]
           gi|223532779|gb|EEF34558.1| ribosomal protein S9,
           putative [Ricinus communis]
          Length = 152

 Score =  179 bits (453), Expect(2) = 2e-44
 Identities = 88/91 (96%), Positives = 90/91 (98%)
 Frame = +3

Query: 270 LLLGRHRFSGVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEESKKEIKDILVRY 449
           LLLGRHRF+ VDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDE+SKKEIKDILVRY
Sbjct: 62  LLLGRHRFAAVDMRIRVKGGGHTSQIYAIRQSIAKALVAYYQKFVDEQSKKEIKDILVRY 121

Query: 450 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 542
           DRTLLVADPRRCEPKKFGGRGARARFQKSYR
Sbjct: 122 DRTLLVADPRRCEPKKFGGRGARARFQKSYR 152



 Score = 26.9 bits (58), Expect(2) = 2e-44
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = +2

Query: 104 ATPPPAPTESVQCFGRK 154
           A    A TESVQCFGRK
Sbjct: 6   AVAAAATTESVQCFGRK 22


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