BLASTX nr result

ID: Bupleurum21_contig00004359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004359
         (605 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis ...   351   6e-95
ref|XP_004147346.1| PREDICTED: 60S ribosomal protein L10-like [C...   349   2e-94
ref|XP_004141510.1| PREDICTED: 60S ribosomal protein L10-like [C...   349   2e-94
ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform...   349   2e-94
gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]        349   2e-94

>ref|XP_002264609.1| PREDICTED: 60S ribosomal protein L10 [Vitis vinifera]
           gi|297745742|emb|CBI15798.3| unnamed protein product
           [Vitis vinifera]
          Length = 220

 Score =  351 bits (900), Expect = 6e-95
 Identities = 168/172 (97%), Positives = 169/172 (98%)
 Frame = -2

Query: 517 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 338
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 337 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTK+AGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKYAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 157 KPLGTCARVSIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWG 2
           KP GTCARVSIGQVLLSVRCKD NS HAQEALRRAKFKFPGRQKIIVSRKWG
Sbjct: 121 KPQGTCARVSIGQVLLSVRCKDGNSHHAQEALRRAKFKFPGRQKIIVSRKWG 172


>ref|XP_004147346.1| PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus]
           gi|449517467|ref|XP_004165767.1| PREDICTED: 60S
           ribosomal protein L10-like [Cucumis sativus]
          Length = 220

 Score =  349 bits (896), Expect = 2e-94
 Identities = 167/172 (97%), Positives = 169/172 (98%)
 Frame = -2

Query: 517 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 338
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 337 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 157 KPLGTCARVSIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWG 2
           KP GTCARV+IGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWG
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWG 172


>ref|XP_004141510.1| PREDICTED: 60S ribosomal protein L10-like [Cucumis sativus]
           gi|449520435|ref|XP_004167239.1| PREDICTED: 60S
           ribosomal protein L10-like [Cucumis sativus]
          Length = 219

 Score =  349 bits (896), Expect = 2e-94
 Identities = 167/172 (97%), Positives = 169/172 (98%)
 Frame = -2

Query: 517 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 338
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 337 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 157 KPLGTCARVSIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWG 2
           KP GTCARV+IGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWG
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSQHAQEALRRAKFKFPGRQKIIVSRKWG 172


>ref|XP_002275297.1| PREDICTED: 60S ribosomal protein L10 isoform 2 [Vitis vinifera]
           gi|225425354|ref|XP_002275270.1| PREDICTED: 60S
           ribosomal protein L10 isoform 1 [Vitis vinifera]
          Length = 224

 Score =  349 bits (896), Expect = 2e-94
 Identities = 167/172 (97%), Positives = 168/172 (97%)
 Frame = -2

Query: 517 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 338
           MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 337 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 157 KPLGTCARVSIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWG 2
           KP GTCARV+IGQVLLSVRCKD N  HAQEALRRAKFKFPGRQKIIVSRKWG
Sbjct: 121 KPQGTCARVNIGQVLLSVRCKDGNGNHAQEALRRAKFKFPGRQKIIVSRKWG 172


>gb|ADR71273.1| 60S ribosomal protein L10B [Hevea brasiliensis]
          Length = 220

 Score =  349 bits (895), Expect = 2e-94
 Identities = 167/172 (97%), Positives = 169/172 (98%)
 Frame = -2

Query: 517 MGRRPARCYRQIKNKPYPKSRYCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 338
           MGRRPARCYRQIKNKPYPKSR+CRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV
Sbjct: 1   MGRRPARCYRQIKNKPYPKSRFCRGVPDPKIRIYDVGMKKKGVDEFPFCVHLVSWEKENV 60

Query: 337 SSEALEAARIACNKYMTKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 158
           SSEALEAARIACNKYM KFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG
Sbjct: 61  SSEALEAARIACNKYMAKFAGKDAFHLRVRVHPFHVLRINKMLSCAGADRLQTGMRGAFG 120

Query: 157 KPLGTCARVSIGQVLLSVRCKDSNSPHAQEALRRAKFKFPGRQKIIVSRKWG 2
           KP GTCARV+IGQVLLSVRCKDSNS HAQEALRRAKFKFPGRQKIIVSRKWG
Sbjct: 121 KPQGTCARVAIGQVLLSVRCKDSNSHHAQEALRRAKFKFPGRQKIIVSRKWG 172


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