BLASTX nr result

ID: Bupleurum21_contig00004348 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004348
         (632 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   325   6e-87
emb|CBI38032.3| unnamed protein product [Vitis vinifera]              325   6e-87
emb|CBI18352.3| unnamed protein product [Vitis vinifera]              322   4e-86
ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   322   4e-86
ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putativ...   316   3e-84

>ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
            vinifera]
          Length = 712

 Score =  325 bits (832), Expect = 6e-87
 Identities = 172/212 (81%), Positives = 192/212 (90%), Gaps = 2/212 (0%)
 Frame = +3

Query: 3    KIRQGCEVMIATPGRLIDCLERGYAVLNQCNYVVLDEADQMIDMGFEPQVVGVLDSIPSS 182
            +IRQGCEV+IATPGRLIDCLER YAVLNQCNYVVLDEAD+MIDMGFEPQVVGVLD++PSS
Sbjct: 414  RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 473

Query: 183  NFKPENE--ELDEKKIYRTTHMFTATMPLTPAVQGLARKYLRNPVVVSIGTAGEATTDLI 356
            N KPENE  ELDEKKIYRTT+MF+ATMP  PAV+ LARKYLRNPVVV+IGTAG+AT DLI
Sbjct: 474  NLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVTIGTAGKAT-DLI 530

Query: 357  TQHVIMVKESEKMSMLQKLLDDLGDKTAIVFLNTRKAAYSVLEGLDKIEYQVTTLHGYMS 536
            TQHVIM+KESEKM  LQKLLD+LGDKTAIVF+NT+K+A ++ +GLDK  Y+VTTLHG  S
Sbjct: 531  TQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGYRVTTLHGGKS 590

Query: 537  QEQIEISLEGFRNKKYNVLVATDVVVAGRGID 632
            QEQ EISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 591  QEQREISLEGFRTKRYNVLVATD--VAGRGID 620


>emb|CBI38032.3| unnamed protein product [Vitis vinifera]
          Length = 797

 Score =  325 bits (832), Expect = 6e-87
 Identities = 172/212 (81%), Positives = 192/212 (90%), Gaps = 2/212 (0%)
 Frame = +3

Query: 3    KIRQGCEVMIATPGRLIDCLERGYAVLNQCNYVVLDEADQMIDMGFEPQVVGVLDSIPSS 182
            +IRQGCEV+IATPGRLIDCLER YAVLNQCNYVVLDEAD+MIDMGFEPQVVGVLD++PSS
Sbjct: 428  RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 487

Query: 183  NFKPENE--ELDEKKIYRTTHMFTATMPLTPAVQGLARKYLRNPVVVSIGTAGEATTDLI 356
            N KPENE  ELDEKKIYRTT+MF+ATMP  PAV+ LARKYLRNPVVV+IGTAG+AT DLI
Sbjct: 488  NLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVTIGTAGKAT-DLI 544

Query: 357  TQHVIMVKESEKMSMLQKLLDDLGDKTAIVFLNTRKAAYSVLEGLDKIEYQVTTLHGYMS 536
            TQHVIM+KESEKM  LQKLLD+LGDKTAIVF+NT+K+A ++ +GLDK  Y+VTTLHG  S
Sbjct: 545  TQHVIMMKESEKMFKLQKLLDELGDKTAIVFINTKKSADNLAKGLDKAGYRVTTLHGGKS 604

Query: 537  QEQIEISLEGFRNKKYNVLVATDVVVAGRGID 632
            QEQ EISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 605  QEQREISLEGFRTKRYNVLVATD--VAGRGID 634


>emb|CBI18352.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  322 bits (825), Expect = 4e-86
 Identities = 171/212 (80%), Positives = 190/212 (89%), Gaps = 2/212 (0%)
 Frame = +3

Query: 3   KIRQGCEVMIATPGRLIDCLERGYAVLNQCNYVVLDEADQMIDMGFEPQVVGVLDSIPSS 182
           +IRQGCEV+IATPGRLIDCLER YAVLNQCNYVVLDEAD+MIDMGFEPQVVGVLD++PSS
Sbjct: 332 RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 391

Query: 183 NFKPENE--ELDEKKIYRTTHMFTATMPLTPAVQGLARKYLRNPVVVSIGTAGEATTDLI 356
           N KPENE  ELDEKKIYRTT+MF+ATMP  PAV+ LARKYLRNPVVV+IGTAG+AT DLI
Sbjct: 392 NLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVTIGTAGKAT-DLI 448

Query: 357 TQHVIMVKESEKMSMLQKLLDDLGDKTAIVFLNTRKAAYSVLEGLDKIEYQVTTLHGYMS 536
           TQHVIMVK SEKM  LQKLLD+LGDKTAIVF+NT+K+  ++ +GLDK  Y+VTTLHG  S
Sbjct: 449 TQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKAGYRVTTLHGGKS 508

Query: 537 QEQIEISLEGFRNKKYNVLVATDVVVAGRGID 632
           QEQ EISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 509 QEQREISLEGFRTKRYNVLVATD--VAGRGID 538


>ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
            vinifera]
          Length = 709

 Score =  322 bits (825), Expect = 4e-86
 Identities = 171/212 (80%), Positives = 190/212 (89%), Gaps = 2/212 (0%)
 Frame = +3

Query: 3    KIRQGCEVMIATPGRLIDCLERGYAVLNQCNYVVLDEADQMIDMGFEPQVVGVLDSIPSS 182
            +IRQGCEV+IATPGRLIDCLER YAVLNQCNYVVLDEAD+MIDMGFEPQVVGVLD++PSS
Sbjct: 411  RIRQGCEVVIATPGRLIDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 470

Query: 183  NFKPENE--ELDEKKIYRTTHMFTATMPLTPAVQGLARKYLRNPVVVSIGTAGEATTDLI 356
            N KPENE  ELDEKKIYRTT+MF+ATMP  PAV+ LARKYLRNPVVV+IGTAG+AT DLI
Sbjct: 471  NLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVTIGTAGKAT-DLI 527

Query: 357  TQHVIMVKESEKMSMLQKLLDDLGDKTAIVFLNTRKAAYSVLEGLDKIEYQVTTLHGYMS 536
            TQHVIMVK SEKM  LQKLLD+LGDKTAIVF+NT+K+  ++ +GLDK  Y+VTTLHG  S
Sbjct: 528  TQHVIMVKGSEKMPKLQKLLDELGDKTAIVFINTKKSTDTLAKGLDKAGYRVTTLHGGKS 587

Query: 537  QEQIEISLEGFRNKKYNVLVATDVVVAGRGID 632
            QEQ EISLEGFR K+YNVLVATD  VAGRGID
Sbjct: 588  QEQREISLEGFRTKRYNVLVATD--VAGRGID 617


>ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
            gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA
            helicase, putative [Ricinus communis]
          Length = 714

 Score =  316 bits (809), Expect = 3e-84
 Identities = 168/212 (79%), Positives = 188/212 (88%), Gaps = 2/212 (0%)
 Frame = +3

Query: 3    KIRQGCEVMIATPGRLIDCLERGYAVLNQCNYVVLDEADQMIDMGFEPQVVGVLDSIPSS 182
            +IRQGCEV+IATPGRL+DCLER YAVLNQCNYVVLDEAD+MIDMGFEPQVVGVLD++PSS
Sbjct: 416  RIRQGCEVVIATPGRLLDCLERRYAVLNQCNYVVLDEADRMIDMGFEPQVVGVLDAMPSS 475

Query: 183  NFKPEN--EELDEKKIYRTTHMFTATMPLTPAVQGLARKYLRNPVVVSIGTAGEATTDLI 356
            N KPEN  EELDEKKIYRTT+MF+ATMP  PAV+ LARKYLRNPVVV+IGTAG+A TDLI
Sbjct: 476  NLKPENEDEELDEKKIYRTTYMFSATMP--PAVERLARKYLRNPVVVNIGTAGKA-TDLI 532

Query: 357  TQHVIMVKESEKMSMLQKLLDDLGDKTAIVFLNTRKAAYSVLEGLDKIEYQVTTLHGYMS 536
            +QHVIMVKESEK   LQ+LLD+ GDKTAIVF+NT+K A +V + LDK +Y+VTTLHG  S
Sbjct: 533  SQHVIMVKESEKFFKLQRLLDEAGDKTAIVFVNTKKNADTVAKNLDKAKYRVTTLHGGKS 592

Query: 537  QEQIEISLEGFRNKKYNVLVATDVVVAGRGID 632
            QEQ EISLEGFR KKY VLVATD  VAGRGID
Sbjct: 593  QEQREISLEGFRTKKYTVLVATD--VAGRGID 622


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