BLASTX nr result

ID: Bupleurum21_contig00004346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004346
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275647.1| PREDICTED: sex determination protein tassels...   417   e-114
emb|CAN62844.1| hypothetical protein VITISV_021186 [Vitis vinifera]   414   e-113
ref|XP_003548897.1| PREDICTED: sex determination protein tassels...   406   e-111
ref|XP_002512852.1| short chain alcohol dehydrogenase, putative ...   405   e-111
gb|ACU23760.1| unknown [Glycine max]                                  402   e-110

>ref|XP_002275647.1| PREDICTED: sex determination protein tasselseed-2 [Vitis vinifera]
           gi|296082281|emb|CBI21286.3| unnamed protein product
           [Vitis vinifera]
          Length = 300

 Score =  417 bits (1071), Expect = e-114
 Identities = 203/279 (72%), Positives = 236/279 (84%)
 Frame = -2

Query: 963 STNDDGGSCSRRLQGKVALITGGASGIGKATALEFMRHGAHVVIADIDTELGPPAAKELG 784
           ST   GG    RLQGKVA+ITGGASG+G+A A EF++HGA V+IAD+D++ GP  AK LG
Sbjct: 26  STTSSGG----RLQGKVAMITGGASGLGRAAASEFIQHGAQVIIADVDSQQGPQVAKFLG 81

Query: 783 HEARFIRCDVSIETEVAAAVDTTMALHGKLDIMYNNAGIAGPSIPPGIDTLDLHDFDRVM 604
            +A+F+ CDVS+E +VA AVDT MA HGKLDIM+NNAGIAG +IPPGI  LDL +FDRVM
Sbjct: 82  PQAQFVCCDVSVEAQVAEAVDTAMASHGKLDIMFNNAGIAGKAIPPGIADLDLAEFDRVM 141

Query: 603 NINVRGIIAGIKHAARVMKPAGSGSILCTASISGILGGLGPHPYTVSKFAIPGIVKSVAS 424
            +NVRG IAGIKHAARVM P GSGSILCTASISG++GGLGPHPY++SKFAIPGIVK+++ 
Sbjct: 142 GVNVRGAIAGIKHAARVMIPVGSGSILCTASISGLMGGLGPHPYSISKFAIPGIVKAISY 201

Query: 423 ELCEYGVRINCISPSPIPTPLVIEQISQFFRGATEEQIRGIVNGFGELKGEICEEIDVAR 244
           ELC+YGVRINCISPSPIPTP V+ Q+S F+ GAT+EQI  IVNG GELKG  CEE D+A 
Sbjct: 202 ELCQYGVRINCISPSPIPTPQVVSQLSMFYPGATQEQIAKIVNGLGELKGTKCEESDIAH 261

Query: 243 AALYLASDEAKYVTGHNLVIDGGFTCFKNLKFPTPDQHV 127
           AALYLASDEAKYVTGHNLV+DGGFTCFK L FP+PDQ V
Sbjct: 262 AALYLASDEAKYVTGHNLVVDGGFTCFKTLGFPSPDQVV 300


>emb|CAN62844.1| hypothetical protein VITISV_021186 [Vitis vinifera]
          Length = 332

 Score =  414 bits (1065), Expect = e-113
 Identities = 199/268 (74%), Positives = 232/268 (86%)
 Frame = -2

Query: 930 RLQGKVALITGGASGIGKATALEFMRHGAHVVIADIDTELGPPAAKELGHEARFIRCDVS 751
           RLQGKVA+ITGGASG+G+A A EF++HGA V+IAD+D++ GP  AK LG +A+F+ CDVS
Sbjct: 65  RLQGKVAMITGGASGLGRAAASEFIQHGAQVIIADVDSQQGPQVAKFLGPQAQFVCCDVS 124

Query: 750 IETEVAAAVDTTMALHGKLDIMYNNAGIAGPSIPPGIDTLDLHDFDRVMNINVRGIIAGI 571
           +E +VA AVDT MA HGKLDIM+NNAGIAG +IPPGI  LDL +FDRVM +NVRG IAGI
Sbjct: 125 VEAQVAEAVDTAMASHGKLDIMFNNAGIAGKAIPPGIADLDLAEFDRVMGVNVRGAIAGI 184

Query: 570 KHAARVMKPAGSGSILCTASISGILGGLGPHPYTVSKFAIPGIVKSVASELCEYGVRINC 391
           KHAARVM P GSGSILCTASISG++GGLGPHPY++SKFAIPGIVK+++ ELC+YGVRINC
Sbjct: 185 KHAARVMIPVGSGSILCTASISGLMGGLGPHPYSISKFAIPGIVKAISYELCQYGVRINC 244

Query: 390 ISPSPIPTPLVIEQISQFFRGATEEQIRGIVNGFGELKGEICEEIDVARAALYLASDEAK 211
           ISPSPIPTP V+ Q+S F+ GAT+EQI  IVNG GELKG  CEE D+A AALYLASDEAK
Sbjct: 245 ISPSPIPTPQVVSQLSMFYPGATQEQIAKIVNGLGELKGTKCEESDIAHAALYLASDEAK 304

Query: 210 YVTGHNLVIDGGFTCFKNLKFPTPDQHV 127
           YVTGHNLV+DGGFTCFK L FP+PDQ V
Sbjct: 305 YVTGHNLVVDGGFTCFKTLGFPSPDQVV 332


>ref|XP_003548897.1| PREDICTED: sex determination protein tasselseed-2-like [Glycine max]
          Length = 301

 Score =  406 bits (1044), Expect = e-111
 Identities = 204/302 (67%), Positives = 244/302 (80%), Gaps = 1/302 (0%)
 Frame = -2

Query: 1035 MLRLLRRSGQLKLIHTDL-RCFSSISTNDDGGSCSRRLQGKVALITGGASGIGKATALEF 859
            MLR L R  +   +  DL +  S       GG   RRL+GKVALITG ASG+GKATA EF
Sbjct: 1    MLRTLARVFKRATLANDLLQKRSRFYATTVGG---RRLEGKVALITGSASGLGKATAHEF 57

Query: 858  MRHGAHVVIADIDTELGPPAAKELGHEARFIRCDVSIETEVAAAVDTTMALHGKLDIMYN 679
            ++HGA V+IAD DT+LGP  AKELG  A +  CDV++E +VA AV+  +A +GKLDIMYN
Sbjct: 58   VQHGAQVIIADNDTKLGPQVAKELGPSAHYTECDVTVEAQVADAVNVAVAHYGKLDIMYN 117

Query: 678  NAGIAGPSIPPGIDTLDLHDFDRVMNINVRGIIAGIKHAARVMKPAGSGSILCTASISGI 499
            NAGI GPSIPP I  LDL +FDRVM IN+RG+IAGIKHAARVM P GSGSILCT+SISG+
Sbjct: 118  NAGIPGPSIPPSIVDLDLDEFDRVMRINIRGMIAGIKHAARVMIPVGSGSILCTSSISGV 177

Query: 498  LGGLGPHPYTVSKFAIPGIVKSVASELCEYGVRINCISPSPIPTPLVIEQISQFFRGATE 319
            LGGLGPHPYT+SKF IPG+VKS+ASELC+ G+RINCISP+PIPTP+V+ QI +F+ G T+
Sbjct: 178  LGGLGPHPYTISKFTIPGVVKSLASELCKVGIRINCISPAPIPTPMVLAQIGKFYPGLTQ 237

Query: 318  EQIRGIVNGFGELKGEICEEIDVARAALYLASDEAKYVTGHNLVIDGGFTCFKNLKFPTP 139
            EQI GIVNGFGELKG  CE+IDVA+AALYLASDEAK+++G NL++DGGFT FKNL FP+P
Sbjct: 238  EQIVGIVNGFGELKGAKCEDIDVAKAALYLASDEAKFISGQNLIVDGGFTSFKNLTFPSP 297

Query: 138  DQ 133
            DQ
Sbjct: 298  DQ 299


>ref|XP_002512852.1| short chain alcohol dehydrogenase, putative [Ricinus communis]
           gi|223547863|gb|EEF49355.1| short chain alcohol
           dehydrogenase, putative [Ricinus communis]
          Length = 302

 Score =  405 bits (1041), Expect = e-111
 Identities = 197/291 (67%), Positives = 235/291 (80%)
 Frame = -2

Query: 999 LIHTDLRCFSSISTNDDGGSCSRRLQGKVALITGGASGIGKATALEFMRHGAHVVIADID 820
           +IH  L    +I +       +RRL+GKVALITGGASG+G ATA +F++HGA V+IAD+D
Sbjct: 12  IIHDGLTAKHAIRSYSTATGAARRLEGKVALITGGASGLGNATAHQFIQHGARVIIADVD 71

Query: 819 TELGPPAAKELGHEARFIRCDVSIETEVAAAVDTTMALHGKLDIMYNNAGIAGPSIPPGI 640
           ++LG   A ELG  A F+RCDV++E +V  AV+  M  HGKLDIMYNNAGI GPS+PP I
Sbjct: 72  SKLGQQVATELGSAAHFVRCDVTVEAQVKDAVEAAMGRHGKLDIMYNNAGIPGPSVPPSI 131

Query: 639 DTLDLHDFDRVMNINVRGIIAGIKHAARVMKPAGSGSILCTASISGILGGLGPHPYTVSK 460
             LDL +FD+VM INVRGI+AGIKHAARVM PAGSGSILCT+SI G+LGGLGPHPYT+SK
Sbjct: 132 ADLDLDEFDKVMQINVRGIVAGIKHAARVMIPAGSGSILCTSSICGVLGGLGPHPYTISK 191

Query: 459 FAIPGIVKSVASELCEYGVRINCISPSPIPTPLVIEQISQFFRGATEEQIRGIVNGFGEL 280
           FAIPGIVK+VASELC+ G+RINCISP PIPTP+ + QI+QF+ GAT E+I  I+NG GEL
Sbjct: 192 FAIPGIVKTVASELCKNGIRINCISPGPIPTPMSVGQIAQFYPGATREKIVEIMNGVGEL 251

Query: 279 KGEICEEIDVARAALYLASDEAKYVTGHNLVIDGGFTCFKNLKFPTPDQHV 127
           KG  CEEIDVA+AALYLASDEAKY+TGHNLV+DGGFT FK+  FP P Q V
Sbjct: 252 KGANCEEIDVAKAALYLASDEAKYITGHNLVVDGGFTSFKSFSFPHPHQIV 302


>gb|ACU23760.1| unknown [Glycine max]
          Length = 303

 Score =  402 bits (1034), Expect = e-110
 Identities = 201/301 (66%), Positives = 239/301 (79%)
 Frame = -2

Query: 1035 MLRLLRRSGQLKLIHTDLRCFSSISTNDDGGSCSRRLQGKVALITGGASGIGKATALEFM 856
            MLR L R  +   +  DL    S       G  S RL+GKVALITG ASG+GKATA EF+
Sbjct: 1    MLRTLARVFKRATLANDLLQKRSRFYATTVGGRSDRLEGKVALITGSASGLGKATAHEFV 60

Query: 855  RHGAHVVIADIDTELGPPAAKELGHEARFIRCDVSIETEVAAAVDTTMALHGKLDIMYNN 676
            +HGA V+IAD DT+LGP  AKELG  A +  CDV++E +VA AV+  +A +GKLDIMYNN
Sbjct: 61   QHGAQVIIADNDTKLGPQVAKELGPSAHYTECDVTVEAQVADAVNVAVAHYGKLDIMYNN 120

Query: 675  AGIAGPSIPPGIDTLDLHDFDRVMNINVRGIIAGIKHAARVMKPAGSGSILCTASISGIL 496
            AGI GPSIPP I  LDL +FDRVM IN+RG+IAGIKHAARVM P GSGSILCT+SISG+L
Sbjct: 121  AGIPGPSIPPSIVDLDLDEFDRVMRINIRGMIAGIKHAARVMIPVGSGSILCTSSISGVL 180

Query: 495  GGLGPHPYTVSKFAIPGIVKSVASELCEYGVRINCISPSPIPTPLVIEQISQFFRGATEE 316
            GGLGPHPYT+SKF IPG+VKS+ASELC+ G+RINCISP+PIPTP+V+ QI +F+ G T+E
Sbjct: 181  GGLGPHPYTISKFTIPGVVKSLASELCKVGIRINCISPAPIPTPMVLAQIGKFYPGLTQE 240

Query: 315  QIRGIVNGFGELKGEICEEIDVARAALYLASDEAKYVTGHNLVIDGGFTCFKNLKFPTPD 136
            QI GIVNGFGELKG  CE+IDVA+AALYLASDEAK+++G NL++DGGF  FKN  FP PD
Sbjct: 241  QIVGIVNGFGELKGAKCEDIDVAKAALYLASDEAKFISGQNLIVDGGFPSFKNFTFPFPD 300

Query: 135  Q 133
            Q
Sbjct: 301  Q 301


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