BLASTX nr result

ID: Bupleurum21_contig00004326 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004326
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528121.1| structural molecule, putative [Ricinus commu...   233   1e-59
ref|XP_002297657.1| predicted protein [Populus trichocarpa] gi|2...   229   3e-58
ref|XP_002283329.1| PREDICTED: probable plastid-lipid-associated...   221   6e-56
ref|XP_004142141.1| PREDICTED: probable plastid-lipid-associated...   213   2e-53
gb|AEL98899.1| plastid-lipid-associated protein, partial [Silene...   208   4e-52

>ref|XP_002528121.1| structural molecule, putative [Ricinus communis]
           gi|223532460|gb|EEF34251.1| structural molecule,
           putative [Ricinus communis]
          Length = 409

 Score =  233 bits (595), Expect = 1e-59
 Identities = 109/160 (68%), Positives = 133/160 (83%)
 Frame = -3

Query: 540 TTFVLQKTSEPRQRLLSAIATNTKVREEIEDFIATNHNSAKVELQLLEGEWDMIWSSQME 361
           TTFVLQK +EPRQ LL+AI+T TKV+E I++F+  N   A  E++LLEGEW MIWSSQ E
Sbjct: 243 TTFVLQKRTEPRQALLAAISTGTKVKEAIDEFVEANQKVATDEIELLEGEWQMIWSSQTE 302

Query: 360 TDSWIENAANGLMGRQIVKANGELKFVVDILLGLKFSMTGTYSKSDTNLYELTMDDAAII 181
           TDSWIENA NGLMG+QI+K NG+LKF+VDI+ GL+FSMTGTY KS T  Y + MDDAAII
Sbjct: 303 TDSWIENAGNGLMGKQIIKKNGQLKFLVDIIFGLRFSMTGTYEKSGTKTYNVIMDDAAII 362

Query: 180 AGPYGLPVEIESRFNLELLYADNKLRITKGYKNTIFVHVR 61
            GPYGLPVE+E++ N+ELLYAD K+RI+KGY + +FVHVR
Sbjct: 363 GGPYGLPVEMETKINMELLYADEKIRISKGYNSIVFVHVR 402


>ref|XP_002297657.1| predicted protein [Populus trichocarpa] gi|222844915|gb|EEE82462.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  229 bits (583), Expect = 3e-58
 Identities = 110/165 (66%), Positives = 134/165 (81%)
 Frame = -3

Query: 540 TTFVLQKTSEPRQRLLSAIATNTKVREEIEDFIATNHNSAKVELQLLEGEWDMIWSSQME 361
           TTFVLQK +EPRQRLLSAI T T V E I +FI  N N AK E++L++GEW MIWSSQME
Sbjct: 233 TTFVLQKKTEPRQRLLSAIWTGTGVLEAINEFIKLNQNVAKDEMELIDGEWQMIWSSQME 292

Query: 360 TDSWIENAANGLMGRQIVKANGELKFVVDILLGLKFSMTGTYSKSDTNLYELTMDDAAII 181
           TDSWIENA  GLMG+QIV  NG+LKFVVDILLG++FSMTGT+ KS  N Y++ MDDAAII
Sbjct: 293 TDSWIENAGRGLMGKQIVTKNGQLKFVVDILLGVRFSMTGTFVKSSPNTYDVKMDDAAII 352

Query: 180 AGPYGLPVEIESRFNLELLYADNKLRITKGYKNTIFVHVRVGANK 46
            G +GLPVE+E++ NLELLY+D+K+RI++GYKN +FVH R    +
Sbjct: 353 GGMFGLPVEMETKINLELLYSDDKIRISRGYKNIVFVHARTDGTR 397


>ref|XP_002283329.1| PREDICTED: probable plastid-lipid-associated protein 12,
           chloroplastic [Vitis vinifera]
           gi|297746405|emb|CBI16461.3| unnamed protein product
           [Vitis vinifera]
          Length = 396

 Score =  221 bits (563), Expect = 6e-56
 Identities = 109/162 (67%), Positives = 130/162 (80%)
 Frame = -3

Query: 540 TTFVLQKTSEPRQRLLSAIATNTKVREEIEDFIATNHNSAKVELQLLEGEWDMIWSSQME 361
           TTFVLQK +EPRQR LS I+  T V E I +FI+ N N A  E QLLEGEW MIWSSQ E
Sbjct: 236 TTFVLQKNTEPRQRFLSVISKGTGVMEAINEFISLNQNKATGEPQLLEGEWQMIWSSQQE 295

Query: 360 TDSWIENAANGLMGRQIVKANGELKFVVDILLGLKFSMTGTYSKSDTNLYELTMDDAAII 181
           TDSW+ENAANGLMG QIVK   +LKFVVDILLG +FSM GT+ K+    YE+TM+DAAI+
Sbjct: 296 TDSWLENAANGLMGTQIVKGE-QLKFVVDILLGFRFSMIGTFVKTGATTYEVTMNDAAIV 354

Query: 180 AGPYGLPVEIESRFNLELLYADNKLRITKGYKNTIFVHVRVG 55
           AGP GLP+E+ES+FNLELLY D+K+RIT+G++N  FVH+RVG
Sbjct: 355 AGPVGLPMEMESKFNLELLYTDDKIRITRGFRNITFVHLRVG 396


>ref|XP_004142141.1| PREDICTED: probable plastid-lipid-associated protein 12,
           chloroplastic-like [Cucumis sativus]
           gi|449503596|ref|XP_004162081.1| PREDICTED: probable
           plastid-lipid-associated protein 12, chloroplastic-like
           [Cucumis sativus]
          Length = 436

 Score =  213 bits (541), Expect = 2e-53
 Identities = 105/165 (63%), Positives = 130/165 (78%)
 Frame = -3

Query: 540 TTFVLQKTSEPRQRLLSAIATNTKVREEIEDFIATNHNSAKVELQLLEGEWDMIWSSQME 361
           TTFVLQK +E RQ+LL AI+T+  V E I+  I+ N N  K E +LLEG W+M+WSSQME
Sbjct: 271 TTFVLQKQTEARQKLLLAISTDKGVEEAIDKLISENQNENKFEEELLEGGWNMLWSSQME 330

Query: 360 TDSWIENAANGLMGRQIVKANGELKFVVDILLGLKFSMTGTYSKSDTNLYELTMDDAAII 181
           TDSWIENAANGLMG Q++K NG++KF VD+LLGL+FSM GT  KS  N Y++TMDDAAII
Sbjct: 331 TDSWIENAANGLMGMQVIK-NGQMKFGVDMLLGLRFSMIGTLVKSGDNAYDVTMDDAAII 389

Query: 180 AGPYGLPVEIESRFNLELLYADNKLRITKGYKNTIFVHVRVGANK 46
            GP+G P+ +ESRF L+LLY D K+RIT+GY N +FVHVRV  +K
Sbjct: 390 GGPFGYPLGMESRFKLQLLYNDGKIRITRGYNNILFVHVRVAESK 434


>gb|AEL98899.1| plastid-lipid-associated protein, partial [Silene latifolia]
          Length = 264

 Score =  208 bits (530), Expect = 4e-52
 Identities = 103/160 (64%), Positives = 127/160 (79%)
 Frame = -3

Query: 540 TTFVLQKTSEPRQRLLSAIATNTKVREEIEDFIATNHNSAKVELQLLEGEWDMIWSSQME 361
           TTFVLQK  EPRQ LLSAI+T   V + I+  I+   N  + E +LLEGEW MIWSSQME
Sbjct: 106 TTFVLQKEIEPRQELLSAISTGYGVTQAIDKLISATQNEDE-EPELLEGEWKMIWSSQME 164

Query: 360 TDSWIENAANGLMGRQIVKANGELKFVVDILLGLKFSMTGTYSKSDTNLYELTMDDAAII 181
           TDSW+ENAANGLMG QIVK +G+L+F+VDI+LGL+FSM+GTY K     YE+ MDDAAI+
Sbjct: 165 TDSWLENAANGLMGSQIVKRDGQLRFLVDIVLGLRFSMSGTYQKIGPKKYEVKMDDAAIV 224

Query: 180 AGPYGLPVEIESRFNLELLYADNKLRITKGYKNTIFVHVR 61
           AG +GLP+E+ S+FN+EL YAD+KLRIT GY N +FVH+R
Sbjct: 225 AGSFGLPIEMLSKFNMELKYADDKLRITTGYNNIVFVHLR 264


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