BLASTX nr result

ID: Bupleurum21_contig00004280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004280
         (341 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304860.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chlorop...    77   1e-12
ref|XP_002299110.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002336625.1| predicted protein [Populus trichocarpa] gi|2...    75   4e-12
ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent tra...    74   9e-12

>ref|XP_002304860.1| predicted protein [Populus trichocarpa] gi|222842292|gb|EEE79839.1|
           predicted protein [Populus trichocarpa]
          Length = 267

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 45/111 (40%), Positives = 60/111 (54%)
 Frame = -2

Query: 334 MEALGSPSFSSFQLSPALKTLPRTQIQQRXXXXXXXXXXXNASFFLSRTNNNAKFRLQAA 155
           MEAL +    SF  SP +   P  Q+ ++            +SF  S   N +  ++   
Sbjct: 1   MEALNA----SFVPSPHIPATP-AQVLRKSQFLHFQFSSIPSSFVQSYDRNKSSSKILTT 55

Query: 154 ISPIFSTDTTDPPEQDIEIVGEDEKFDWFSQWYPVMPVCDLDKRAPHGKKV 2
           +S   ST+T DP E  +E   + E FDW++QWYPVMPVCDLDKR PH KKV
Sbjct: 56  LSSSVSTETLDPTEPALETDSQQETFDWYAQWYPVMPVCDLDKREPHAKKV 106


>ref|XP_003524954.1| PREDICTED: pheophorbide a oxygenase, chloroplastic-like [Glycine
           max]
          Length = 529

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 32/60 (53%), Positives = 45/60 (75%)
 Frame = -2

Query: 181 NAKFRLQAAISPIFSTDTTDPPEQDIEIVGEDEKFDWFSQWYPVMPVCDLDKRAPHGKKV 2
           ++K +L  A+SP   T++++ PE + E     EKFDW+SQWYP+MP+CDLDKR PHGK+V
Sbjct: 46  SSKSKLLTALSPPPLTESSNQPEAEPEFESHAEKFDWYSQWYPLMPICDLDKRKPHGKRV 105


>ref|XP_002299110.1| predicted protein [Populus trichocarpa] gi|222846368|gb|EEE83915.1|
           predicted protein [Populus trichocarpa]
          Length = 478

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 30/46 (65%), Positives = 38/46 (82%)
 Frame = -2

Query: 139 STDTTDPPEQDIEIVGEDEKFDWFSQWYPVMPVCDLDKRAPHGKKV 2
           STD+  PPE ++E+  + EKFDW++QWYP+MPVCDLDKR PH KKV
Sbjct: 65  STDSIGPPEPEVEVETKREKFDWYAQWYPLMPVCDLDKRVPHAKKV 110


>ref|XP_002336625.1| predicted protein [Populus trichocarpa] gi|222836377|gb|EEE74784.1|
           predicted protein [Populus trichocarpa]
          Length = 144

 Score = 75.5 bits (184), Expect = 4e-12
 Identities = 29/46 (63%), Positives = 38/46 (82%)
 Frame = -2

Query: 139 STDTTDPPEQDIEIVGEDEKFDWFSQWYPVMPVCDLDKRAPHGKKV 2
           ST++ + PE ++E V ++EKFDW++QWYPVMPVCDLDKR PH K V
Sbjct: 5   STESMEQPEAELEAVSQEEKFDWYAQWYPVMPVCDLDKRVPHAKTV 50


>ref|XP_002283592.2| PREDICTED: protochlorophyllide-dependent translocon component 52,
           chloroplastic-like [Vitis vinifera]
          Length = 532

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 31/59 (52%), Positives = 42/59 (71%)
 Frame = -2

Query: 178 AKFRLQAAISPIFSTDTTDPPEQDIEIVGEDEKFDWFSQWYPVMPVCDLDKRAPHGKKV 2
           A+ R+  A+S   ST+  +P E +++   ++EKF+W  QWYPVMPVCDLDKR PH KKV
Sbjct: 43  ARSRVVTAVSSTVSTEPVNPVEPEVQSHSQEEKFNWLLQWYPVMPVCDLDKRIPHAKKV 101


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