BLASTX nr result

ID: Bupleurum21_contig00004276 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004276
         (1376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor...   716   0.0  
ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor...   716   0.0  
emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]   716   0.0  
ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor...   715   0.0  
ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor...   715   0.0  

>ref|XP_003632558.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Vitis vinifera]
          Length = 1172

 Score =  716 bits (1847), Expect = 0.0
 Identities = 355/375 (94%), Positives = 370/375 (98%)
 Frame = -1

Query: 1376 YSIIMLDEAHERTIHTDILFGLLKRLVKRRPDLRLIVTSATLDAEKFSGYFFSCNIFTIP 1197
            YS+IMLDEAHERTIHTD+LFGLLK LVKRRPDLRLIVTSATLDAEKFSGYFF+CNIFTIP
Sbjct: 633  YSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 692

Query: 1196 GRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDILVFLTGQEEIDHACQCLYERMK 1017
            GRTFPVEILYTKQPESDYLDA+LITV+QIHLTEPEGDIL+FLTGQEEIDHACQ LYERMK
Sbjct: 693  GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMK 752

Query: 1016 GLGKNIPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIYYVIDPG 837
            GLGKN+PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI+YVIDPG
Sbjct: 753  GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 812

Query: 836  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIP 657
            FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTS+P
Sbjct: 813  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVP 872

Query: 656  EIQRINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 477
            EIQRINLG+TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR
Sbjct: 873  EIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 932

Query: 476  KMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNVYYRPREKQAQADQKRAKFFQP 297
            KMAEFP++PPLSKMLLASVDLGCSDEILTIIAMIQTGN++YRPREKQAQADQKRAKFFQP
Sbjct: 933  KMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 992

Query: 296  EGDHLTLLAVYEASK 252
            EGDHLTLLAVYEA K
Sbjct: 993  EGDHLTLLAVYEAWK 1007


>ref|XP_002268542.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like isoform 2 [Vitis vinifera]
          Length = 1175

 Score =  716 bits (1847), Expect = 0.0
 Identities = 355/375 (94%), Positives = 370/375 (98%)
 Frame = -1

Query: 1376 YSIIMLDEAHERTIHTDILFGLLKRLVKRRPDLRLIVTSATLDAEKFSGYFFSCNIFTIP 1197
            YS+IMLDEAHERTIHTD+LFGLLK LVKRRPDLRLIVTSATLDAEKFSGYFF+CNIFTIP
Sbjct: 636  YSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 695

Query: 1196 GRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDILVFLTGQEEIDHACQCLYERMK 1017
            GRTFPVEILYTKQPESDYLDA+LITV+QIHLTEPEGDIL+FLTGQEEIDHACQ LYERMK
Sbjct: 696  GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMK 755

Query: 1016 GLGKNIPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIYYVIDPG 837
            GLGKN+PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI+YVIDPG
Sbjct: 756  GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 815

Query: 836  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIP 657
            FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTS+P
Sbjct: 816  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVP 875

Query: 656  EIQRINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 477
            EIQRINLG+TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR
Sbjct: 876  EIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 935

Query: 476  KMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNVYYRPREKQAQADQKRAKFFQP 297
            KMAEFP++PPLSKMLLASVDLGCSDEILTIIAMIQTGN++YRPREKQAQADQKRAKFFQP
Sbjct: 936  KMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 995

Query: 296  EGDHLTLLAVYEASK 252
            EGDHLTLLAVYEA K
Sbjct: 996  EGDHLTLLAVYEAWK 1010


>emb|CAN82460.1| hypothetical protein VITISV_005515 [Vitis vinifera]
          Length = 1162

 Score =  716 bits (1847), Expect = 0.0
 Identities = 355/375 (94%), Positives = 370/375 (98%)
 Frame = -1

Query: 1376 YSIIMLDEAHERTIHTDILFGLLKRLVKRRPDLRLIVTSATLDAEKFSGYFFSCNIFTIP 1197
            YS+IMLDEAHERTIHTD+LFGLLK LVKRRPDLRLIVTSATLDAEKFSGYFF+CNIFTIP
Sbjct: 645  YSVIMLDEAHERTIHTDVLFGLLKHLVKRRPDLRLIVTSATLDAEKFSGYFFNCNIFTIP 704

Query: 1196 GRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDILVFLTGQEEIDHACQCLYERMK 1017
            GRTFPVEILYTKQPESDYLDA+LITV+QIHLTEPEGDIL+FLTGQEEIDHACQ LYERMK
Sbjct: 705  GRTFPVEILYTKQPESDYLDASLITVLQIHLTEPEGDILLFLTGQEEIDHACQSLYERMK 764

Query: 1016 GLGKNIPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIYYVIDPG 837
            GLGKN+PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI+YVIDPG
Sbjct: 765  GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 824

Query: 836  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIP 657
            FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPTS+P
Sbjct: 825  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTSVP 884

Query: 656  EIQRINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 477
            EIQRINLG+TTL MKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR
Sbjct: 885  EIQRINLGLTTLTMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 944

Query: 476  KMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNVYYRPREKQAQADQKRAKFFQP 297
            KMAEFP++PPLSKMLLASVDLGCSDEILTIIAMIQTGN++YRPREKQAQADQKRAKFFQP
Sbjct: 945  KMAEFPLEPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 1004

Query: 296  EGDHLTLLAVYEASK 252
            EGDHLTLLAVYEA K
Sbjct: 1005 EGDHLTLLAVYEAWK 1019


>ref|XP_003549455.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1197

 Score =  715 bits (1846), Expect = 0.0
 Identities = 356/375 (94%), Positives = 371/375 (98%)
 Frame = -1

Query: 1376 YSIIMLDEAHERTIHTDILFGLLKRLVKRRPDLRLIVTSATLDAEKFSGYFFSCNIFTIP 1197
            YS+IMLDEAHERTIHTD+LFGLLK+LVKRRP+LRLIVTSATLDAEKFSGYFF+CNIFTIP
Sbjct: 658  YSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIP 717

Query: 1196 GRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDILVFLTGQEEIDHACQCLYERMK 1017
            GRTFPVEILYTKQPESDYLDAALITV+QIHLTEPEGDIL+FLTGQEEID ACQ LYERMK
Sbjct: 718  GRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 777

Query: 1016 GLGKNIPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIYYVIDPG 837
            GLGKN+PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI+YVIDPG
Sbjct: 778  GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 837

Query: 836  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIP 657
            FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPT+IP
Sbjct: 838  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIP 897

Query: 656  EIQRINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 477
            EIQRINLG+TTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR
Sbjct: 898  EIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 957

Query: 476  KMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNVYYRPREKQAQADQKRAKFFQP 297
            KMAEFP+DPPLSKMLLASVDLGCSDEILTIIAMIQTGN++YRPREKQAQADQKRAKFFQP
Sbjct: 958  KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 1017

Query: 296  EGDHLTLLAVYEASK 252
            EGDHLTLLAVYEA K
Sbjct: 1018 EGDHLTLLAVYEAWK 1032


>ref|XP_003544395.1| PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA
            helicase-like [Glycine max]
          Length = 1203

 Score =  715 bits (1846), Expect = 0.0
 Identities = 356/375 (94%), Positives = 371/375 (98%)
 Frame = -1

Query: 1376 YSIIMLDEAHERTIHTDILFGLLKRLVKRRPDLRLIVTSATLDAEKFSGYFFSCNIFTIP 1197
            YS+IMLDEAHERTIHTD+LFGLLK+LVKRRP+LRLIVTSATLDAEKFSGYFF+CNIFTIP
Sbjct: 664  YSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATLDAEKFSGYFFNCNIFTIP 723

Query: 1196 GRTFPVEILYTKQPESDYLDAALITVMQIHLTEPEGDILVFLTGQEEIDHACQCLYERMK 1017
            GRTFPVEILYTKQPESDYLDAALITV+QIHLTEPEGDIL+FLTGQEEID ACQ LYERMK
Sbjct: 724  GRTFPVEILYTKQPESDYLDAALITVLQIHLTEPEGDILLFLTGQEEIDFACQSLYERMK 783

Query: 1016 GLGKNIPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIYYVIDPG 837
            GLGKN+PELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGI+YVIDPG
Sbjct: 784  GLGKNVPELIILPVYSALPSEMQSRIFDPAPPGKRKVVVATNIAEASLTIDGIFYVIDPG 843

Query: 836  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAFHNEMSPTSIP 657
            FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESA+ NEMSPT+IP
Sbjct: 844  FAKQNVYNPKQGLDSLVITPISQASAKQRAGRAGRTGPGKCYRLYTESAYRNEMSPTTIP 903

Query: 656  EIQRINLGVTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 477
            EIQRINLG+TTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR
Sbjct: 904  EIQRINLGMTTLNMKAMGINDLLSFDFMDPPSPQALISAMEQLYSLGALDEEGLLTKLGR 963

Query: 476  KMAEFPMDPPLSKMLLASVDLGCSDEILTIIAMIQTGNVYYRPREKQAQADQKRAKFFQP 297
            KMAEFP+DPPLSKMLLASVDLGCSDEILTIIAMIQTGN++YRPREKQAQADQKRAKFFQP
Sbjct: 964  KMAEFPLDPPLSKMLLASVDLGCSDEILTIIAMIQTGNIFYRPREKQAQADQKRAKFFQP 1023

Query: 296  EGDHLTLLAVYEASK 252
            EGDHLTLLAVYEA K
Sbjct: 1024 EGDHLTLLAVYEAWK 1038


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