BLASTX nr result

ID: Bupleurum21_contig00004273 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00004273
         (1434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|2...   512   e-143
ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycin...   496   e-138
ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   496   e-138
ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820...   492   e-136
ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, c...   489   e-136

>ref|XP_002321091.1| predicted protein [Populus trichocarpa] gi|222861864|gb|EEE99406.1|
            predicted protein [Populus trichocarpa]
          Length = 374

 Score =  512 bits (1319), Expect = e-143
 Identities = 264/377 (70%), Positives = 301/377 (79%), Gaps = 12/377 (3%)
 Frame = -3

Query: 1327 MANSVLLTSPFPISS-KPNSLY-------LKPNSIFTHITTTNIFKLHTT-KF--PKSHN 1181
            MA+S+LL++PF  S   PN+L        L+P+S FT ++ T     +   KF  P    
Sbjct: 1    MASSLLLSNPFLTSPHNPNNLTRRQQPLTLRPSSAFTLLSLTKPSNNNNNPKFLKPTVPF 60

Query: 1180 LGRWKIKA-IGKTDGRSSSSIVPEEELLVGEDSAVFELEKQKVSSWVYFTXXXXXXXXXX 1004
            LG  K    I   D  + +S+ P    L GEDSA FEL KQKVSSW+YF+          
Sbjct: 61   LGFKKFATRISTKDADTDTSVPPP---LAGEDSAAFELGKQKVSSWIYFSLILGVVLFVL 117

Query: 1003 XXGWIDNSTGLGKDFINAVSAISDSPEVVMILLILIFAAVHSGLASLRDVGEKLIGERAF 824
               WIDNSTG GKDFI+AVS++S+SPEVVM +LILIFA VHSGLASLRD+GEKLIGERAF
Sbjct: 118  DVAWIDNSTGFGKDFISAVSSLSESPEVVMFILILIFATVHSGLASLRDMGEKLIGERAF 177

Query: 823  RVLFAGTSLPLAVSTVVYFINHRYDGVQLWQLQSIPLLHHLLWLANFVSFLFLYPSTFNL 644
            RVLFAG SLPLAVSTVVYFINHRYDG+QLW+LQS P +H L+WL+NF+SFLFLYPSTFNL
Sbjct: 178  RVLFAGVSLPLAVSTVVYFINHRYDGIQLWELQSAPAVHQLVWLSNFISFLFLYPSTFNL 237

Query: 643  LEVAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHTIWIGNSVAVAASVGLIGHHLFG 464
            LEVAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHT+WIGNSV VAAS+GLIGHHLFG
Sbjct: 238  LEVAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHTVWIGNSVTVAASLGLIGHHLFG 297

Query: 463  VWNGDRRLAIRYGEDFELVKSRTSVIPFAAILEGRQKLPKDYYKEFIRLPYVAITAVTLG 284
            VWNGDRRLA RYGE FE VK RTS++PFAAIL+GRQKLPKDYY+ F+RLPY++ITA+TLG
Sbjct: 298  VWNGDRRLATRYGEAFEAVKKRTSIVPFAAILDGRQKLPKDYYRXFLRLPYLSITALTLG 357

Query: 283  AYFAHPLMQAASFRLHW 233
            AYFAHPLMQAASFRLHW
Sbjct: 358  AYFAHPLMQAASFRLHW 374


>ref|NP_001242088.1| uncharacterized protein LOC100793910 [Glycine max]
            gi|255639319|gb|ACU19957.1| unknown [Glycine max]
          Length = 369

 Score =  496 bits (1278), Expect = e-138
 Identities = 248/336 (73%), Positives = 279/336 (83%), Gaps = 1/336 (0%)
 Frame = -3

Query: 1237 ITTTNIFKLHTTKFPKSHNLGR-WKIKAIGKTDGRSSSSIVPEEELLVGEDSAVFELEKQ 1061
            IT TN+ KL +  F  S+++   +  K + +T    + S   +E   VGEDSAVFEL KQ
Sbjct: 35   ITKTNL-KLSSQCFSNSNSVAPIYCRKFVARTSIGENESESEKELGFVGEDSAVFELGKQ 93

Query: 1060 KVSSWVYFTXXXXXXXXXXXXGWIDNSTGLGKDFINAVSAISDSPEVVMILLILIFAAVH 881
            KVSSW+YFT             WIDNSTG GK FI+AVS +SDS EVVM++LILIFA VH
Sbjct: 94   KVSSWIYFTAILGVVLYVLNVAWIDNSTGYGKAFIDAVSTLSDSSEVVMLILILIFAGVH 153

Query: 880  SGLASLRDVGEKLIGERAFRVLFAGTSLPLAVSTVVYFINHRYDGVQLWQLQSIPLLHHL 701
            SGLAS R+ GEKLIGER FRVLFAG SLPLAVSTVVYFINHRYDG+QLWQLQ  P LH L
Sbjct: 154  SGLASFRNTGEKLIGERPFRVLFAGISLPLAVSTVVYFINHRYDGLQLWQLQDAPGLHQL 213

Query: 700  LWLANFVSFLFLYPSTFNLLEVAAVDKPKMHLWETGIMRITRHPQMVGQVMWCLAHTIWI 521
            LWL+NF+SF FLYPSTFNLLEVAAVDKPK+HLWETGI+RITRHPQMVGQV+WCLAHTIWI
Sbjct: 214  LWLSNFISFFFLYPSTFNLLEVAAVDKPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWI 273

Query: 520  GNSVAVAASVGLIGHHLFGVWNGDRRLAIRYGEDFELVKSRTSVIPFAAILEGRQKLPKD 341
            GNSVAVAAS+GLI HHLFGVWNGDRRLAIRYGEDFELV+SRTSV+PFAAIL+GRQ+LPKD
Sbjct: 274  GNSVAVAASIGLIAHHLFGVWNGDRRLAIRYGEDFELVRSRTSVVPFAAILDGRQELPKD 333

Query: 340  YYKEFIRLPYVAITAVTLGAYFAHPLMQAASFRLHW 233
            +YKEFIRLPY+ +T +TLGAYFAHPLMQAASF LHW
Sbjct: 334  FYKEFIRLPYLTVTVITLGAYFAHPLMQAASFNLHW 369


>ref|XP_004152101.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like
            [Cucumis sativus] gi|449521697|ref|XP_004167866.1|
            PREDICTED: 15-cis-zeta-carotene isomerase,
            chloroplastic-like [Cucumis sativus]
          Length = 372

 Score =  496 bits (1276), Expect = e-138
 Identities = 253/366 (69%), Positives = 290/366 (79%), Gaps = 8/366 (2%)
 Frame = -3

Query: 1306 TSPF--PISSKPNSLYLKPNSIFTH---ITTTNIFKLHTTKFPKSHNLGRWKIKAIGKTD 1142
            T PF  P  S P   + +P++I      I+T N  +         H   R ++ A     
Sbjct: 7    TPPFSPPFLSSPRHRHRRPDAISFRPFSISTPNCLQQLPLSLNSFHIFRRPRLVAEASIG 66

Query: 1141 GRSS--SSIVPEEELLVGEDSAVFELEKQKVSSWVYFTXXXXXXXXXXXXGWIDNSTG-L 971
             R S  S+ V ++E  VGED+A F+L +QK++SWVYFT             WIDNS G +
Sbjct: 67   DRESGGSTSVSDDEGFVGEDAAAFDLSEQKLTSWVYFTVILGVVLFVLNVVWIDNSAGGV 126

Query: 970  GKDFINAVSAISDSPEVVMILLILIFAAVHSGLASLRDVGEKLIGERAFRVLFAGTSLPL 791
            GK F++AVS ISDS EVVM+LLI IFA VHSGLASLRD GEKL+GERAFRVLFAG SLPL
Sbjct: 127  GKAFLDAVSGISDSHEVVMLLLIFIFAIVHSGLASLRDQGEKLVGERAFRVLFAGVSLPL 186

Query: 790  AVSTVVYFINHRYDGVQLWQLQSIPLLHHLLWLANFVSFLFLYPSTFNLLEVAAVDKPKM 611
            AVSTVVYFINHRYDGVQLWQLQS+PLLH L+WL++FVSF+FLYPSTFNLLEVAAVDKPKM
Sbjct: 187  AVSTVVYFINHRYDGVQLWQLQSVPLLHQLVWLSSFVSFIFLYPSTFNLLEVAAVDKPKM 246

Query: 610  HLWETGIMRITRHPQMVGQVMWCLAHTIWIGNSVAVAASVGLIGHHLFGVWNGDRRLAIR 431
            HLWETGI+RITRHPQMVGQV+WCLAHTIWIGNSVAVAAS+GLIGHHLFGVWNGDRRLA R
Sbjct: 247  HLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIGHHLFGVWNGDRRLAKR 306

Query: 430  YGEDFELVKSRTSVIPFAAILEGRQKLPKDYYKEFIRLPYVAITAVTLGAYFAHPLMQAA 251
            YG DFE VKSRTS+IPFAAI++GRQKLP DYYKEF+RLPY++ITA+T+GAY AHPLMQAA
Sbjct: 307  YGADFEAVKSRTSIIPFAAIVDGRQKLPDDYYKEFLRLPYLSITALTIGAYLAHPLMQAA 366

Query: 250  SFRLHW 233
            SFRLHW
Sbjct: 367  SFRLHW 372


>ref|XP_003553105.1| PREDICTED: uncharacterized protein LOC100820507 [Glycine max]
          Length = 374

 Score =  492 bits (1266), Expect = e-136
 Identities = 241/310 (77%), Positives = 267/310 (86%), Gaps = 1/310 (0%)
 Frame = -3

Query: 1159 AIGKTDGRSSSSIVPEEEL-LVGEDSAVFELEKQKVSSWVYFTXXXXXXXXXXXXGWIDN 983
            +IG+ +  S S    E++L LVGEDSA FEL KQK+SSW+YFT             WIDN
Sbjct: 69   SIGENESESES----EKDLGLVGEDSAAFELGKQKISSWIYFTAILGVVLCVLNVAWIDN 124

Query: 982  STGLGKDFINAVSAISDSPEVVMILLILIFAAVHSGLASLRDVGEKLIGERAFRVLFAGT 803
            STG GK FI+AVS +SDS EVVM++LILIFA VHSGLAS R+ GEKLIGER FRV+FAG 
Sbjct: 125  STGYGKAFIDAVSTLSDSHEVVMLILILIFAGVHSGLASFRNTGEKLIGERPFRVIFAGI 184

Query: 802  SLPLAVSTVVYFINHRYDGVQLWQLQSIPLLHHLLWLANFVSFLFLYPSTFNLLEVAAVD 623
            SLPLAVSTVVYFINHRYDG+QLW LQ  P LH LLWL+NF+SF FLYPSTFNLLEVAAVD
Sbjct: 185  SLPLAVSTVVYFINHRYDGLQLWLLQDAPGLHQLLWLSNFISFFFLYPSTFNLLEVAAVD 244

Query: 622  KPKMHLWETGIMRITRHPQMVGQVMWCLAHTIWIGNSVAVAASVGLIGHHLFGVWNGDRR 443
            KPK+HLWETGI+RITRHPQMVGQV+WCLAHTIWIGNSVAVAAS+GLI HHLFGVWNGDRR
Sbjct: 245  KPKLHLWETGIIRITRHPQMVGQVIWCLAHTIWIGNSVAVAASIGLIAHHLFGVWNGDRR 304

Query: 442  LAIRYGEDFELVKSRTSVIPFAAILEGRQKLPKDYYKEFIRLPYVAITAVTLGAYFAHPL 263
            LAIRYGEDFELVKSRTSV+PFAAIL+GRQKLPKD+YKEFIRLPY+ +TA+TLGAYFAHPL
Sbjct: 305  LAIRYGEDFELVKSRTSVVPFAAILDGRQKLPKDFYKEFIRLPYLTVTALTLGAYFAHPL 364

Query: 262  MQAASFRLHW 233
            MQ ASF LHW
Sbjct: 365  MQTASFNLHW 374


>ref|XP_002267391.1| PREDICTED: 15-cis-zeta-carotene isomerase, chloroplastic-like [Vitis
            vinifera]
          Length = 365

 Score =  489 bits (1258), Expect = e-136
 Identities = 253/369 (68%), Positives = 289/369 (78%), Gaps = 4/369 (1%)
 Frame = -3

Query: 1327 MANSVLLTSPFPISSKPNS----LYLKPNSIFTHITTTNIFKLHTTKFPKSHNLGRWKIK 1160
            MA S+LL+S F +SS P S    L     S F +  T+    L +T  P        KI 
Sbjct: 1    MATSLLLSSSF-LSSSPLSQSRRLTYARTSCFPYARTSAKLFLKSTHVPSCSFRFCHKIM 59

Query: 1159 AIGKTDGRSSSSIVPEEELLVGEDSAVFELEKQKVSSWVYFTXXXXXXXXXXXXGWIDNS 980
            A G + G +    V  E + VGEDSA F+L +QK+SSW+YF              WIDNS
Sbjct: 60   A-GTSIGETEEEGV--EPVTVGEDSAAFDLGQQKISSWIYFGGILGVVLFLLDVVWIDNS 116

Query: 979  TGLGKDFINAVSAISDSPEVVMILLILIFAAVHSGLASLRDVGEKLIGERAFRVLFAGTS 800
            TG GKDFI AV+ +S+S EVVM++L LIFA  HSGLASLRD GEKLIGERAFRVLFAGTS
Sbjct: 117  TGFGKDFIAAVAGVSESHEVVMLILTLIFAIGHSGLASLRDSGEKLIGERAFRVLFAGTS 176

Query: 799  LPLAVSTVVYFINHRYDGVQLWQLQSIPLLHHLLWLANFVSFLFLYPSTFNLLEVAAVDK 620
            LPLAVSTVVYFINHRYDG+QLWQLQS+P +H L+W ++FVSF FLYPSTFNLLEVAAVDK
Sbjct: 177  LPLAVSTVVYFINHRYDGLQLWQLQSVPGIHQLVWFSSFVSFFFLYPSTFNLLEVAAVDK 236

Query: 619  PKMHLWETGIMRITRHPQMVGQVMWCLAHTIWIGNSVAVAASVGLIGHHLFGVWNGDRRL 440
            PKMHLWETGIMRITRHPQMVGQV+WC+AHT+WIGNSVAVAAS+GLIGHHLFGVWNGDRRL
Sbjct: 237  PKMHLWETGIMRITRHPQMVGQVIWCIAHTVWIGNSVAVAASIGLIGHHLFGVWNGDRRL 296

Query: 439  AIRYGEDFELVKSRTSVIPFAAILEGRQKLPKDYYKEFIRLPYVAITAVTLGAYFAHPLM 260
            A RYGE F+ V+ RTS+IPFAAIL+GRQKLPKDYYKEF+RLPY++IT +TLGAY AHPLM
Sbjct: 297  ASRYGEAFDTVQRRTSIIPFAAILDGRQKLPKDYYKEFLRLPYLSITMLTLGAYLAHPLM 356

Query: 259  QAASFRLHW 233
            QAASFRLHW
Sbjct: 357  QAASFRLHW 365


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